RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 C1QL4Q86Z23 238 aa9.47□□□□□ -0.89
SCFD1-201ENST00000311943 SECTM1Q8WVN6 248 aa9.47□□□□□ -0.89
SCFD1-201ENST00000311943 KCTD12Q96CX2 325 aaKnown RBP9.47□□□□□ -0.89
SCFD1-201ENST00000311943 SLIRPQ9GZT3 109 aaKnown RBP9.47□□□□□ -0.89
SCFD1-201ENST00000311943 CCDC160A6NGH7 325 aa9.46□□□□□ -0.89
SCFD1-201ENST00000311943 M0QYG6 137 aa9.46□□□□□ -0.89
SCFD1-201ENST00000311943 ITGB1BP1O14713 200 aa9.46□□□□□ -0.89
SCFD1-201ENST00000311943 NBR2O15453 112 aa9.46□□□□□ -0.89
SCFD1-201ENST00000311943 FGF16O43320 207 aa9.46□□□□□ -0.89
SCFD1-201ENST00000311943 TXNL1O43396 289 aa9.46□□□□□ -0.89
SCFD1-201ENST00000311943 SLC25A17O43808 307 aa9.46□□□□□ -0.89
SCFD1-201ENST00000311943 IGLV2-23P01705 113 aa9.46□□□□□ -0.89
SCFD1-201ENST00000311943 OR5H8P0DN80 308 aa9.46□□□□□ -0.89
SCFD1-201ENST00000311943 KHDC1LQ5JSQ8 128 aa9.46□□□□□ -0.89
SCFD1-201ENST00000311943 PRR31Q5SQ13 230 aa9.46□□□□□ -0.89
SCFD1-201ENST00000311943 FAAP20Q6NZ36 180 aa9.46□□□□□ -0.89
SCFD1-201ENST00000311943 TREML4Q6UXN2 200 aa9.46□□□□□ -0.89
SCFD1-201ENST00000311943 STPG2Q8N412 459 aa9.46□□□□□ -0.89
SCFD1-201ENST00000311943 OR4D10Q8NGI6 311 aa9.46□□□□□ -0.89
SCFD1-201ENST00000311943 OR52I2Q8NH67 350 aa9.46□□□□□ -0.89
SCFD1-201ENST00000311943 GPX8Q8TED1 209 aa9.46□□□□□ -0.89
SCFD1-201ENST00000311943 RAB2BQ8WUD1 216 aa9.46□□□□□ -0.89
SCFD1-201ENST00000311943 DDB2Q92466 427 aa9.46□□□□□ -0.89
SCFD1-201ENST00000311943 RASL11BQ9BPW5 248 aa9.46□□□□□ -0.89
SCFD1-201ENST00000311943 SLC35D1Q9NTN3 355 aa9.46□□□□□ -0.89
SCFD1-201ENST00000311943 LIN7CQ9NUP9 197 aaKnown RBP9.46□□□□□ -0.89
SCFD1-201ENST00000311943 WASHC3Q9Y3C0 194 aa9.46□□□□□ -0.89
SCFD1-201ENST00000311943 SOX15O60248 233 aa9.46□□□□□ -0.9
SCFD1-201ENST00000311943 SCGNO76038 276 aa9.46□□□□□ -0.9
SCFD1-201ENST00000311943 EGR2P11161 476 aaPredicted RBP9.46□□□□□ -0.9
SCFD1-201ENST00000311943 PRSS3P35030 304 aa9.46□□□□□ -0.9
SCFD1-201ENST00000311943 HRH1P35367 487 aa9.46□□□□□ -0.9
SCFD1-201ENST00000311943 TMBIM6P55061 237 aa9.46□□□□□ -0.9
SCFD1-201ENST00000311943 RPS16P62249 146 aaKnown RBP9.46□□□□□ -0.9
SCFD1-201ENST00000311943 DGCR2P98153 550 aa9.46□□□□□ -0.9
SCFD1-201ENST00000311943 CD83Q01151 205 aa9.46□□□□□ -0.9
SCFD1-201ENST00000311943 DEFA5Q01523 94 aa9.46□□□□□ -0.9
SCFD1-201ENST00000311943 EIF4EBP1Q13541 118 aaPredicted RBP9.46□□□□□ -0.9
SCFD1-201ENST00000311943 PSG5Q15238 335 aa9.46□□□□□ -0.9
SCFD1-201ENST00000311943 C5orf64Q2M2E5 130 aa9.46□□□□□ -0.9
SCFD1-201ENST00000311943 ZNF660Q6AZW8 331 aaPredicted RBP9.46□□□□□ -0.9
SCFD1-201ENST00000311943 OR5AP2Q8NGF4 316 aa9.46□□□□□ -0.9
SCFD1-201ENST00000311943 KLK15Q9H2R5 256 aa9.46□□□□□ -0.9
SCFD1-201ENST00000311943 EHFQ9NZC4 300 aa9.46□□□□□ -0.9
SCFD1-201ENST00000311943 SCOCQ9UIL1 159 aa9.46□□□□□ -0.9
SCFD1-201ENST00000311943 MEGF8Q7Z7M0 2845 aa9.45□□□□□ -0.9
SCFD1-201ENST00000311943 A0A0A6YYH2 397 aa9.45□□□□□ -0.9
SCFD1-201ENST00000311943 PSMB11A5LHX3 300 aa9.45□□□□□ -0.9
SCFD1-201ENST00000311943 A6NJ64 397 aa9.45□□□□□ -0.9
SCFD1-201ENST00000311943 RAMP3O60896 148 aa9.45□□□□□ -0.9
SCFD1-201ENST00000311943 NDUFA3O95167 84 aa9.45□□□□□ -0.9
SCFD1-201ENST00000311943 PPYP01298 95 aa9.45□□□□□ -0.9
SCFD1-201ENST00000311943 RPLP1P05386 114 aaKnown RBP9.45□□□□□ -0.9
SCFD1-201ENST00000311943 MYOD1P15172 320 aa9.45□□□□□ -0.9
SCFD1-201ENST00000311943 SOX6P35712 828 aa9.45□□□□□ -0.9
SCFD1-201ENST00000311943 LUMP51884 338 aaPredicted RBP9.45□□□□□ -0.9
SCFD1-201ENST00000311943 ARL6IP1Q15041 203 aa9.45□□□□□ -0.9
SCFD1-201ENST00000311943 FOXB2Q5VYV0 432 aa9.45□□□□□ -0.9
SCFD1-201ENST00000311943 C6orf62Q9GZU0 229 aaPredicted RBP9.45□□□□□ -0.9
SCFD1-201ENST00000311943 IFT46Q9NQC8 304 aa9.45□□□□□ -0.9
SCFD1-201ENST00000311943 PARP11Q9NR21 331 aa9.45□□□□□ -0.9
SCFD1-201ENST00000311943 METTL1Q9UBP6 276 aaKnown RBP9.45□□□□□ -0.9
SCFD1-201ENST00000311943 ANAPC10Q9UM13 185 aa9.45□□□□□ -0.9
SCFD1-201ENST00000311943 RRHO14718 337 aa9.44□□□□□ -0.9
SCFD1-201ENST00000311943 FCGR3BO75015 233 aa9.44□□□□□ -0.9
SCFD1-201ENST00000311943 CRYZL1O95825 349 aa9.44□□□□□ -0.9
SCFD1-201ENST00000311943 RPA2P15927 270 aa9.44□□□□□ -0.9
SCFD1-201ENST00000311943 RANBP1P43487 201 aa9.44□□□□□ -0.9
SCFD1-201ENST00000311943 CX3CL1P78423 397 aa9.44□□□□□ -0.9
SCFD1-201ENST00000311943 DEFB136Q30KP8 78 aa9.44□□□□□ -0.9
SCFD1-201ENST00000311943 LIN54Q6MZP7 749 aa9.44□□□□□ -0.9
SCFD1-201ENST00000311943 ZNF818PQ6ZRF7 136 aa9.44□□□□□ -0.9
SCFD1-201ENST00000311943 ZNF645Q8N7E2 425 aa9.44□□□□□ -0.9
SCFD1-201ENST00000311943 NPBQ8NG41 125 aa9.44□□□□□ -0.9
SCFD1-201ENST00000311943 R3HDM4Q96D70 268 aa9.44□□□□□ -0.9
SCFD1-201ENST00000311943 RBMX2Q9Y388 322 aaKnown RBP9.44□□□□□ -0.9
SCFD1-201ENST00000311943 NOTCH1P46531 2555 aa9.44□□□□□ -0.9
SCFD1-201ENST00000311943 OR5H14A6NHG9 310 aa9.44□□□□□ -0.9
SCFD1-201ENST00000311943 M0QZK8 103 aa9.44□□□□□ -0.9
SCFD1-201ENST00000311943 ARPC1BO15143 372 aaKnown RBP9.44□□□□□ -0.9
SCFD1-201ENST00000311943 CA2P00918 260 aa9.44□□□□□ -0.9
SCFD1-201ENST00000311943 CDK10Q15131 360 aa9.44□□□□□ -0.9
SCFD1-201ENST00000311943 ECSCRQ19T08 205 aa9.44□□□□□ -0.9
SCFD1-201ENST00000311943 C10orf55Q5SWW7 151 aa9.44□□□□□ -0.9
SCFD1-201ENST00000311943 FAM71F2Q6NXP2 309 aa9.44□□□□□ -0.9
SCFD1-201ENST00000311943 OVCH2Q7RTZ1 564 aa9.44□□□□□ -0.9
SCFD1-201ENST00000311943 SGMS2Q8NHU3 365 aa9.44□□□□□ -0.9
SCFD1-201ENST00000311943 ACOT12Q8WYK0 555 aa9.44□□□□□ -0.9
SCFD1-201ENST00000311943 ZNF2Q9BSG1 426 aaPredicted RBP9.44□□□□□ -0.9
SCFD1-201ENST00000311943 TINAGL1Q9GZM7 467 aaPredicted RBP9.44□□□□□ -0.9
SCFD1-201ENST00000311943 TCRBV4S1A1TA0A5B7 111 aa9.43□□□□□ -0.9
SCFD1-201ENST00000311943 CSF1P09603 554 aa9.43□□□□□ -0.9
SCFD1-201ENST00000311943 GNRHRP30968 328 aa9.43□□□□□ -0.9
SCFD1-201ENST00000311943 GNB1P62873 340 aa9.43□□□□□ -0.9
SCFD1-201ENST00000311943 PLGLAQ15195 96 aa9.43□□□□□ -0.9
SCFD1-201ENST00000311943 C19orf35Q6ZS72 473 aa9.43□□□□□ -0.9
SCFD1-201ENST00000311943 C8orf86Q6ZUL3 223 aa9.43□□□□□ -0.9
SCFD1-201ENST00000311943 FLYWCH2Q96CP2 140 aaKnown RBP9.43□□□□□ -0.9
SCFD1-201ENST00000311943 OR5B12Q96R08 314 aa9.43□□□□□ -0.9
SCFD1-201ENST00000311943 NECAP2Q9NVZ3 263 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms