RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 TENM4Q6N022 2769 aa18.38■□□□□ 0.53
IRF3-201ENST00000309877 IGHV2-70DA0A0C4DH43 119 aa18.38■□□□□ 0.53
IRF3-201ENST00000309877 S1PR2O95136 353 aa18.38■□□□□ 0.53
IRF3-201ENST00000309877 MPC2O95563 127 aa18.38■□□□□ 0.53
IRF3-201ENST00000309877 PRB3Q04118 309 aaPredicted RBP18.38■□□□□ 0.53
IRF3-201ENST00000309877 NMSQ5H8A3 153 aa18.38■□□□□ 0.53
IRF3-201ENST00000309877 C1orf122Q6ZSJ8 110 aa18.38■□□□□ 0.53
IRF3-201ENST00000309877 LSM10Q969L4 123 aaKnown RBP18.38■□□□□ 0.53
IRF3-201ENST00000309877 S100A10P60903 97 aa18.37■□□□□ 0.53
IRF3-201ENST00000309877 IL15RAQ13261 267 aa18.37■□□□□ 0.53
IRF3-201ENST00000309877 C11orf87Q6NUJ2 197 aa18.37■□□□□ 0.53
IRF3-201ENST00000309877 PNKDQ8N490 385 aa18.37■□□□□ 0.53
IRF3-201ENST00000309877 SIRT7Q9NRC8 400 aa18.37■□□□□ 0.53
IRF3-201ENST00000309877 KPTNQ9Y664 436 aa18.37■□□□□ 0.53
IRF3-201ENST00000309877 RBFOX2O43251 390 aaKnown RBP eCLIP18.36■□□□□ 0.531e-6■□□□□ 9.8
IRF3-201ENST00000309877 SCGB1D2O95969 90 aa18.36■□□□□ 0.53
IRF3-201ENST00000309877 PRTN3P24158 256 aa18.36■□□□□ 0.53
IRF3-201ENST00000309877 PAX2Q02962 417 aa18.36■□□□□ 0.53
IRF3-201ENST00000309877 RAB32Q13637 225 aa18.36■□□□□ 0.53
IRF3-201ENST00000309877 FAM71F2Q6NXP2 309 aa18.36■□□□□ 0.53
IRF3-201ENST00000309877 BEND2Q8NDZ0 799 aa18.36■□□□□ 0.53
IRF3-201ENST00000309877 DDB2Q92466 427 aa18.36■□□□□ 0.53
IRF3-201ENST00000309877 HEXA-AS1Q9H8Q6 139 aa18.36■□□□□ 0.53
IRF3-201ENST00000309877 FAM157AC9JC47 383 aa18.35■□□□□ 0.53
IRF3-201ENST00000309877 HPRT1P00492 218 aa18.35■□□□□ 0.53
IRF3-201ENST00000309877 KRASP01116 189 aa18.35■□□□□ 0.53
IRF3-201ENST00000309877 IGKV1-5P01602 117 aa18.35■□□□□ 0.53
IRF3-201ENST00000309877 PET100P0DJ07 73 aa18.35■□□□□ 0.53
IRF3-201ENST00000309877 CT45A6P0DMU7 189 aa18.35■□□□□ 0.53
IRF3-201ENST00000309877 CT45A5P0DMU8 189 aa18.35■□□□□ 0.53
IRF3-201ENST00000309877 CT45A7P0DMV0 189 aa18.35■□□□□ 0.53
IRF3-201ENST00000309877 SLC25A4P12235 298 aa18.35■□□□□ 0.53
IRF3-201ENST00000309877 SLC25A16P16260 332 aa18.35■□□□□ 0.53
IRF3-201ENST00000309877 EPHA1P21709 976 aa18.35■□□□□ 0.53
IRF3-201ENST00000309877 HLA-DRB5Q30154 266 aa18.35■□□□□ 0.53
IRF3-201ENST00000309877 DEFB113Q30KQ7 82 aa18.35■□□□□ 0.53
IRF3-201ENST00000309877 ZNF383Q8NA42 475 aa18.35■□□□□ 0.53
IRF3-201ENST00000309877 GPR146Q96CH1 333 aa18.35■□□□□ 0.53
IRF3-201ENST00000309877 MMP26Q9NRE1 261 aa18.35■□□□□ 0.53
IRF3-201ENST00000309877 IGLV1-47P01700 117 aa18.34■□□□□ 0.53
IRF3-201ENST00000309877 G6PCP35575 357 aa18.34■□□□□ 0.53
IRF3-201ENST00000309877 FOXRED2Q8IWF2 684 aa18.34■□□□□ 0.53
IRF3-201ENST00000309877 C9orf62Q8N4C0 152 aa18.34■□□□□ 0.53
IRF3-201ENST00000309877 OR4S2Q8NH73 311 aa18.34■□□□□ 0.53
IRF3-201ENST00000309877 PLEKHA2Q9HB19 425 aa18.34■□□□□ 0.53
IRF3-201ENST00000309877 LPAR2Q9HBW0 351 aa18.34■□□□□ 0.53
IRF3-201ENST00000309877 MBD2Q9UBB5 411 aa18.34■□□□□ 0.53
IRF3-201ENST00000309877 AMMECR1Q9Y4X0 333 aaPredicted RBP18.34■□□□□ 0.53
IRF3-201ENST00000309877 HSPB11Q9Y547 144 aa18.34■□□□□ 0.53
IRF3-201ENST00000309877 CRYBG3Q68DQ2 2970 aa18.34■□□□□ 0.53
IRF3-201ENST00000309877 A0A0G2JRQ6 117 aa18.34■□□□□ 0.53
IRF3-201ENST00000309877 A0A1B0GU03 582 aa18.34■□□□□ 0.53
IRF3-201ENST00000309877 HMSDA8MTL9 139 aa18.34■□□□□ 0.53
IRF3-201ENST00000309877 RLN2P04090 185 aa18.34■□□□□ 0.53
IRF3-201ENST00000309877 SLC25A6P12236 298 aa18.34■□□□□ 0.53
IRF3-201ENST00000309877 REG1BP48304 166 aa18.34■□□□□ 0.53
IRF3-201ENST00000309877 ZNF137PP52743 207 aa18.34■□□□□ 0.53
IRF3-201ENST00000309877 SMCO1Q147U7 214 aa18.34■□□□□ 0.53
IRF3-201ENST00000309877 VMO1Q7Z5L0 202 aa18.34■□□□□ 0.53
IRF3-201ENST00000309877 ZNF546Q86UE3 836 aa18.34■□□□□ 0.53
IRF3-201ENST00000309877 FAM219AQ8IW50 185 aa18.34■□□□□ 0.53
IRF3-201ENST00000309877 LRRC75A-AS1Q8N1F1 130 aa18.34■□□□□ 0.53
IRF3-201ENST00000309877 ST6GALNAC6Q969X2 333 aa18.34■□□□□ 0.53
IRF3-201ENST00000309877 MRPL20Q9BYC9 149 aaKnown RBP18.34■□□□□ 0.53
IRF3-201ENST00000309877 ZFP57Q9NU63 452 aa18.34■□□□□ 0.53
IRF3-201ENST00000309877 POLR3KQ9Y2Y1 108 aaPredicted RBP18.34■□□□□ 0.53
IRF3-201ENST00000309877 MMP24Q9Y5R2 645 aa18.34■□□□□ 0.53
IRF3-201ENST00000309877 ARPC5O15511 151 aa18.33■□□□□ 0.52
IRF3-201ENST00000309877 SNAPC5O75971 98 aa18.33■□□□□ 0.52
IRF3-201ENST00000309877 RTL8BQ17RB0 113 aa18.33■□□□□ 0.52
IRF3-201ENST00000309877 LAMTOR1Q6IAA8 161 aa18.33■□□□□ 0.52
IRF3-201ENST00000309877 TGIF2LXQ8IUE1 241 aa18.33■□□□□ 0.52
IRF3-201ENST00000309877 OR4D5Q8NGN0 318 aa18.33■□□□□ 0.52
IRF3-201ENST00000309877 OR1S1Q8NH92 325 aa18.33■□□□□ 0.52
IRF3-201ENST00000309877 BOLA1Q9Y3E2 137 aa18.33■□□□□ 0.52
IRF3-201ENST00000309877 LSM5Q9Y4Y9 91 aaKnown RBP18.33■□□□□ 0.52
IRF3-201ENST00000309877 ARID1AO14497 2285 aa18.33■□□□□ 0.52
IRF3-201ENST00000309877 BUB1B-PAK6H3BSN5 160 aa18.32■□□□□ 0.52
IRF3-201ENST00000309877 APOA2P02652 100 aa18.32■□□□□ 0.52
IRF3-201ENST00000309877 MBPP02686 304 aaPredicted RBP18.32■□□□□ 0.52
IRF3-201ENST00000309877 USF1P22415 310 aaPredicted RBP18.32■□□□□ 0.52
IRF3-201ENST00000309877 DVL1P1P54792 670 aaPredicted RBP18.32■□□□□ 0.52
IRF3-201ENST00000309877 TAGLNQ01995 201 aaKnown RBP18.32■□□□□ 0.52
IRF3-201ENST00000309877 PRSS54Q6PEW0 395 aa18.32■□□□□ 0.52
IRF3-201ENST00000309877 OR11H6Q8NGC7 330 aa18.32■□□□□ 0.52
IRF3-201ENST00000309877 R3HDM4Q96D70 268 aa18.32■□□□□ 0.52
IRF3-201ENST00000309877 RNF126Q9BV68 326 aa18.32■□□□□ 0.52
IRF3-201ENST00000309877 SLC35D1Q9NTN3 355 aa18.32■□□□□ 0.52
IRF3-201ENST00000309877 SPG11Q96JI7 2443 aa18.32■□□□□ 0.52
IRF3-201ENST00000309877 ST8SIA3O43173 380 aa18.31■□□□□ 0.52
IRF3-201ENST00000309877 CRYZL1O95825 349 aa18.31■□□□□ 0.52
IRF3-201ENST00000309877 ARG1P05089 322 aa18.31■□□□□ 0.52
IRF3-201ENST00000309877 ERVK-16P61578 105 aa18.31■□□□□ 0.52
IRF3-201ENST00000309877 DIAPH2-AS1Q14236 149 aa18.31■□□□□ 0.52
IRF3-201ENST00000309877 IZUMO4Q1ZYL8 232 aa18.31■□□□□ 0.52
IRF3-201ENST00000309877 LGALSLQ3ZCW2 172 aaPredicted RBP18.31■□□□□ 0.52
IRF3-201ENST00000309877 TMEM65Q6PI78 240 aa18.31■□□□□ 0.52
IRF3-201ENST00000309877 H2BFWTQ7Z2G1 175 aa18.31■□□□□ 0.52
IRF3-201ENST00000309877 DCUN1D4Q92564 292 aa18.31■□□□□ 0.52
IRF3-201ENST00000309877 SIRPDQ9H106 197 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms