RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 AGBL5Q8NDL9 886 aa9.43□□□□□ -0.9
PTPN7-201ENST00000309017 ZNF576Q9H609 170 aa9.43□□□□□ -0.9
PTPN7-201ENST00000309017 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.43□□□□□ -0.9
PTPN7-201ENST00000309017 LILRA1O75019 489 aa9.43□□□□□ -0.9
PTPN7-201ENST00000309017 GGCTO75223 188 aaKnown RBP9.43□□□□□ -0.9
PTPN7-201ENST00000309017 GCH1P30793 250 aa9.43□□□□□ -0.9
PTPN7-201ENST00000309017 ATP5G3P48201 142 aa9.43□□□□□ -0.9
PTPN7-201ENST00000309017 ATP6V1FQ16864 119 aa9.43□□□□□ -0.9
PTPN7-201ENST00000309017 TUSC5Q8IXB3 177 aa9.43□□□□□ -0.9
PTPN7-201ENST00000309017 RAMP3O60896 148 aa9.42□□□□□ -0.9
PTPN7-201ENST00000309017 RPLP1P05386 114 aaKnown RBP9.42□□□□□ -0.9
PTPN7-201ENST00000309017 LTC4SQ16873 150 aa9.42□□□□□ -0.9
PTPN7-201ENST00000309017 ABLIM2Q6H8Q1 611 aa9.42□□□□□ -0.9
PTPN7-201ENST00000309017 BTF3L4Q96K17 158 aa9.42□□□□□ -0.9
PTPN7-201ENST00000309017 DERL1Q9BUN8 251 aa9.42□□□□□ -0.9
PTPN7-201ENST00000309017 POLR3KQ9Y2Y1 108 aaPredicted RBP9.42□□□□□ -0.9
PTPN7-201ENST00000309017 TIMM9Q9Y5J7 89 aa9.42□□□□□ -0.9
PTPN7-201ENST00000309017 PIEZO1Q92508 2521 aa9.42□□□□□ -0.9
PTPN7-201ENST00000309017 HPRT1P00492 218 aa9.42□□□□□ -0.9
PTPN7-201ENST00000309017 GRPP07492 148 aa9.42□□□□□ -0.9
PTPN7-201ENST00000309017 OR3A1P47881 315 aa9.42□□□□□ -0.9
PTPN7-201ENST00000309017 THBS3P49746 956 aa9.42□□□□□ -0.9
PTPN7-201ENST00000309017 ACSF3Q4G176 576 aaPredicted RBP9.42□□□□□ -0.9
PTPN7-201ENST00000309017 PDLIM3Q53GG5 364 aaPredicted RBP9.42□□□□□ -0.9
PTPN7-201ENST00000309017 FAM103A1Q9BTL3 118 aaKnown RBP9.42□□□□□ -0.9
PTPN7-201ENST00000309017 NPCDR1Q9BY65 106 aa9.42□□□□□ -0.9
PTPN7-201ENST00000309017 WDR54Q9H977 334 aa9.42□□□□□ -0.9
PTPN7-201ENST00000309017 GOLT1BQ9Y3E0 138 aa9.42□□□□□ -0.9
PTPN7-201ENST00000309017 VENTXO95231 258 aa9.42□□□□□ -0.9
PTPN7-201ENST00000309017 EPHA8P29322 1005 aaPredicted RBP9.42□□□□□ -0.9
PTPN7-201ENST00000309017 TPPP2P59282 170 aa9.42□□□□□ -0.9
PTPN7-201ENST00000309017 DBX2Q6ZNG2 339 aa9.42□□□□□ -0.9
PTPN7-201ENST00000309017 MOB1BQ7L9L4 216 aa9.42□□□□□ -0.9
PTPN7-201ENST00000309017 VN1R17PQ8TDU5 208 aa9.42□□□□□ -0.9
PTPN7-201ENST00000309017 IMMP2LQ96T52 175 aa9.42□□□□□ -0.9
PTPN7-201ENST00000309017 OR5B21A6NL26 309 aa9.41□□□□□ -0.9
PTPN7-201ENST00000309017 OR2H2O95918 312 aa9.41□□□□□ -0.9
PTPN7-201ENST00000309017 B3GALT5-AS1P59052 145 aa9.41□□□□□ -0.9
PTPN7-201ENST00000309017 LCN2P80188 198 aa9.41□□□□□ -0.9
PTPN7-201ENST00000309017 GCSAMLQ5JQS6 135 aa9.41□□□□□ -0.9
PTPN7-201ENST00000309017 C1orf194Q5T5A4 169 aa9.41□□□□□ -0.9
PTPN7-201ENST00000309017 TMEM14EPQ6UXP3 125 aa9.41□□□□□ -0.9
PTPN7-201ENST00000309017 TMPRSS7Q7RTY8 843 aa9.41□□□□□ -0.9
PTPN7-201ENST00000309017 DEFB123Q8N688 67 aa9.41□□□□□ -0.9
PTPN7-201ENST00000309017 Q8NFD4 153 aa9.41□□□□□ -0.9
PTPN7-201ENST00000309017 APH1AQ96BI3 265 aa9.41□□□□□ -0.9
PTPN7-201ENST00000309017 C12orf49Q9H741 205 aa9.41□□□□□ -0.9
PTPN7-201ENST00000309017 ODAMA1E959 279 aa9.41□□□□□ -0.9
PTPN7-201ENST00000309017 S1PR2O95136 353 aa9.41□□□□□ -0.9
PTPN7-201ENST00000309017 COX5BP10606 129 aa9.41□□□□□ -0.9
PTPN7-201ENST00000309017 CYB561P49447 251 aa9.41□□□□□ -0.9
PTPN7-201ENST00000309017 TGFBR3Q03167 851 aa9.41□□□□□ -0.9
PTPN7-201ENST00000309017 LINC00596Q86U02 117 aa9.41□□□□□ -0.9
PTPN7-201ENST00000309017 OR2Y1Q8NGV0 311 aa9.41□□□□□ -0.9
PTPN7-201ENST00000309017 IFI44Q8TCB0 444 aa9.41□□□□□ -0.9
PTPN7-201ENST00000309017 OR5P3Q8WZ94 311 aa9.41□□□□□ -0.9
PTPN7-201ENST00000309017 WDYHV1Q96HA8 205 aa9.41□□□□□ -0.9
PTPN7-201ENST00000309017 HSPB9Q9BQS6 159 aa9.41□□□□□ -0.9
PTPN7-201ENST00000309017 VAMP8Q9BV40 100 aa9.41□□□□□ -0.9
PTPN7-201ENST00000309017 FAM234AQ9H0X4 552 aa9.41□□□□□ -0.9
PTPN7-201ENST00000309017 LOC102723996A0A087X1L8 192 aa9.41□□□□□ -0.9
PTPN7-201ENST00000309017 FAM166BA8MTA8 275 aa9.41□□□□□ -0.9
PTPN7-201ENST00000309017 FAM90A26D6RGX4 464 aa9.41□□□□□ -0.9
PTPN7-201ENST00000309017 TDGF1P3P51864 188 aa9.41□□□□□ -0.9
PTPN7-201ENST00000309017 RNPS1Q15287 305 aaKnown RBP9.41□□□□□ -0.9
PTPN7-201ENST00000309017 LINC01551Q86U37 167 aa9.41□□□□□ -0.9
PTPN7-201ENST00000309017 PLPPR2Q96GM1 343 aa9.41□□□□□ -0.9
PTPN7-201ENST00000309017 MPC1Q9Y5U8 109 aa9.41□□□□□ -0.9
PTPN7-201ENST00000309017 CDIPTO14735 213 aa9.4□□□□□ -0.9
PTPN7-201ENST00000309017 CRISP2P16562 243 aa9.4□□□□□ -0.9
PTPN7-201ENST00000309017 CBLN1P23435 193 aa9.4□□□□□ -0.9
PTPN7-201ENST00000309017 CEBPDP49716 269 aaPredicted RBP9.4□□□□□ -0.9
PTPN7-201ENST00000309017 KRTAP27-1Q3LI81 207 aa9.4□□□□□ -0.9
PTPN7-201ENST00000309017 GALMQ96C23 342 aa9.4□□□□□ -0.9
PTPN7-201ENST00000309017 CIB3Q96Q77 187 aaPredicted RBP9.4□□□□□ -0.9
PTPN7-201ENST00000309017 LRRC30A6NM36 301 aa9.4□□□□□ -0.9
PTPN7-201ENST00000309017 PDE6DO43924 150 aa9.4□□□□□ -0.9
PTPN7-201ENST00000309017 SPINK4O60575 86 aa9.4□□□□□ -0.9
PTPN7-201ENST00000309017 ADMP35318 185 aa9.4□□□□□ -0.9
PTPN7-201ENST00000309017 GABRA2P47869 451 aa9.4□□□□□ -0.9
PTPN7-201ENST00000309017 PDLIM4P50479 330 aa9.4□□□□□ -0.9
PTPN7-201ENST00000309017 KRTDAPP60985 99 aa9.4□□□□□ -0.9
PTPN7-201ENST00000309017 OR1L1Q8NH94 360 aa9.4□□□□□ -0.9
PTPN7-201ENST00000309017 ZCCHC14Q8WYQ9 949 aaKnown RBP9.4□□□□□ -0.9
PTPN7-201ENST00000309017 RTL8AQ9BWD3 113 aa9.4□□□□□ -0.9
PTPN7-201ENST00000309017 ACACAQ13085 2346 aa9.4□□□□□ -0.9
PTPN7-201ENST00000309017 LOC400499M0QZD8 3231 aa9.4□□□□□ -0.91
PTPN7-201ENST00000309017 J3QT63 122 aa9.4□□□□□ -0.91
PTPN7-201ENST00000309017 SH2D1BO14796 132 aa9.4□□□□□ -0.91
PTPN7-201ENST00000309017 NUPR1O60356 82 aa9.4□□□□□ -0.91
PTPN7-201ENST00000309017 PAX1P15863 534 aa9.4□□□□□ -0.91
PTPN7-201ENST00000309017 GNB1P62873 340 aa9.4□□□□□ -0.91
PTPN7-201ENST00000309017 TMEM183BQ1AE95 376 aa9.4□□□□□ -0.91
PTPN7-201ENST00000309017 SPINK14Q6IE38 97 aa9.4□□□□□ -0.91
PTPN7-201ENST00000309017 COLCA1Q6ZS62 124 aa9.4□□□□□ -0.91
PTPN7-201ENST00000309017 OR10G8Q8NGN5 311 aa9.4□□□□□ -0.91
PTPN7-201ENST00000309017 DNASE2BQ8WZ79 361 aa9.4□□□□□ -0.91
PTPN7-201ENST00000309017 SFRP2Q96HF1 295 aa9.4□□□□□ -0.91
PTPN7-201ENST00000309017 RBM14Q96PK6 669 aaKnown RBP9.4□□□□□ -0.91
PTPN7-201ENST00000309017 DOCK10Q96BY6 2186 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms