RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 C17orf98A8MV24 154 aa9.78□□□□□ -0.84
TRIM40-205ENST00000307859 KIAA1324LA8MWY0 1029 aaPredicted RBP9.78□□□□□ -0.84
TRIM40-205ENST00000307859 SLC31A2O15432 143 aa9.78□□□□□ -0.84
TRIM40-205ENST00000307859 NDUFB3O43676 98 aa9.78□□□□□ -0.84
TRIM40-205ENST00000307859 GPR137BO60478 399 aa9.78□□□□□ -0.84
TRIM40-205ENST00000307859 RAMP3O60896 148 aa9.78□□□□□ -0.84
TRIM40-205ENST00000307859 P0C879 139 aa9.78□□□□□ -0.84
TRIM40-205ENST00000307859 EPHA1P21709 976 aa9.78□□□□□ -0.84
TRIM40-205ENST00000307859 DUTP33316 252 aaKnown RBP9.78□□□□□ -0.84
TRIM40-205ENST00000307859 AKR1C2P52895 323 aa9.78□□□□□ -0.84
TRIM40-205ENST00000307859 POLR2GP62487 172 aaKnown RBP eCLIP9.78□□□□□ -0.84
TRIM40-205ENST00000307859 ZNF273Q14593 569 aa9.78□□□□□ -0.84
TRIM40-205ENST00000307859 LRRC10Q5BKY1 277 aa9.78□□□□□ -0.84
TRIM40-205ENST00000307859 UTF1Q5T230 341 aa9.78□□□□□ -0.84
TRIM40-205ENST00000307859 Q6ZRM9 215 aa9.78□□□□□ -0.84
TRIM40-205ENST00000307859 SPAG16Q8N0X2 631 aa9.78□□□□□ -0.84
TRIM40-205ENST00000307859 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.78□□□□□ -0.84
TRIM40-205ENST00000307859 RNASE11Q8TAA1 199 aaKnown RBP9.78□□□□□ -0.84
TRIM40-205ENST00000307859 ABHD14AQ9BUJ0 271 aa9.78□□□□□ -0.84
TRIM40-205ENST00000307859 GAL3ST2Q9H3Q3 398 aa9.78□□□□□ -0.84
TRIM40-205ENST00000307859 COA4Q9NYJ1 87 aa9.78□□□□□ -0.84
TRIM40-205ENST00000307859 RPUSD1Q9UJJ7 312 aaKnown RBP9.78□□□□□ -0.84
TRIM40-205ENST00000307859 MMP24Q9Y5R2 645 aa9.78□□□□□ -0.84
TRIM40-205ENST00000307859 TET2Q6N021 2002 aaPredicted RBP9.78□□□□□ -0.84
TRIM40-205ENST00000307859 GAPDHP04406 335 aaKnown RBP9.78□□□□□ -0.84
TRIM40-205ENST00000307859 IGFBP2P18065 325 aa9.78□□□□□ -0.84
TRIM40-205ENST00000307859 PVALBP20472 110 aaPredicted RBP9.78□□□□□ -0.84
TRIM40-205ENST00000307859 TMEM33P57088 247 aa9.78□□□□□ -0.84
TRIM40-205ENST00000307859 RPL31P62899 125 aaKnown RBP9.78□□□□□ -0.84
TRIM40-205ENST00000307859 CT45A1Q5HYN5 189 aa9.78□□□□□ -0.84
TRIM40-205ENST00000307859 DTX2Q86UW9 622 aa9.78□□□□□ -0.84
TRIM40-205ENST00000307859 BAP18Q8IXM2 172 aa9.78□□□□□ -0.84
TRIM40-205ENST00000307859 CT45A3Q8NHU0 189 aa9.78□□□□□ -0.84
TRIM40-205ENST00000307859 PCNPQ8WW12 178 aaKnown RBP9.78□□□□□ -0.84
TRIM40-205ENST00000307859 RAB1BQ9H0U4 201 aa9.78□□□□□ -0.84
TRIM40-205ENST00000307859 SLC25A32Q9H2D1 315 aa9.78□□□□□ -0.84
TRIM40-205ENST00000307859 ZC4H2Q9NQZ6 224 aa9.78□□□□□ -0.84
TRIM40-205ENST00000307859 CACNG5Q9UF02 275 aa9.78□□□□□ -0.84
TRIM40-205ENST00000307859 FBXL17Q9UF56 701 aa9.78□□□□□ -0.84
TRIM40-205ENST00000307859 LAMP3Q9UQV4 416 aa9.78□□□□□ -0.84
TRIM40-205ENST00000307859 DVL1O14640 695 aa9.77□□□□□ -0.85
TRIM40-205ENST00000307859 RBFOX2O43251 390 aaKnown RBP eCLIP9.77□□□□□ -0.85
TRIM40-205ENST00000307859 SSSCA1O60232 199 aa9.77□□□□□ -0.85
TRIM40-205ENST00000307859 MMP23AO75900 390 aa9.77□□□□□ -0.85
TRIM40-205ENST00000307859 ATG12O94817 140 aa9.77□□□□□ -0.85
TRIM40-205ENST00000307859 S1PR2O95136 353 aa9.77□□□□□ -0.85
TRIM40-205ENST00000307859 IGHV2-70P01814 119 aa9.77□□□□□ -0.85
TRIM40-205ENST00000307859 DANCRP0C864 163 aa9.77□□□□□ -0.85
TRIM40-205ENST00000307859 COL8A2P25067 703 aa9.77□□□□□ -0.85
TRIM40-205ENST00000307859 EIF5AP63241 154 aaKnown RBP9.77□□□□□ -0.85
TRIM40-205ENST00000307859 MRPS11P82912 194 aaKnown RBP9.77□□□□□ -0.85
TRIM40-205ENST00000307859 IZUMO4Q1ZYL8 232 aa9.77□□□□□ -0.85
TRIM40-205ENST00000307859 OR2B11Q5JQS5 317 aa9.77□□□□□ -0.85
TRIM40-205ENST00000307859 PRAMEF5Q5TYX0 476 aa9.77□□□□□ -0.85
TRIM40-205ENST00000307859 NCR3LG1Q68D85 454 aa9.77□□□□□ -0.85
TRIM40-205ENST00000307859 TMEM200BQ69YZ2 307 aa9.77□□□□□ -0.85
TRIM40-205ENST00000307859 HEPN1Q6WQI6 88 aa9.77□□□□□ -0.85
TRIM40-205ENST00000307859 ODF3L1Q8IXM7 274 aa9.77□□□□□ -0.85
TRIM40-205ENST00000307859 OR2C3Q8N628 320 aa9.77□□□□□ -0.85
TRIM40-205ENST00000307859 CD300LFQ8TDQ1 290 aa9.77□□□□□ -0.85
TRIM40-205ENST00000307859 LEAP2Q969E1 77 aa9.77□□□□□ -0.85
TRIM40-205ENST00000307859 ZNF714Q96N38 554 aa9.77□□□□□ -0.85
TRIM40-205ENST00000307859 LYRM2Q9NU23 88 aaPredicted RBP9.77□□□□□ -0.85
TRIM40-205ENST00000307859 MED9Q9NWA0 146 aa9.77□□□□□ -0.85
TRIM40-205ENST00000307859 KLF2Q9Y5W3 355 aaPredicted RBP9.77□□□□□ -0.85
TRIM40-205ENST00000307859 A0A1W2PPR1 153 aa9.76□□□□□ -0.85
TRIM40-205ENST00000307859 LEUTXA8MZ59 168 aa9.76□□□□□ -0.85
TRIM40-205ENST00000307859 FAM90A26D6RGX4 464 aa9.76□□□□□ -0.85
TRIM40-205ENST00000307859 M0R1X1 148 aa9.76□□□□□ -0.85
TRIM40-205ENST00000307859 TMEM50AO95807 157 aa9.76□□□□□ -0.85
TRIM40-205ENST00000307859 SOD3P08294 240 aa9.76□□□□□ -0.85
TRIM40-205ENST00000307859 RRASP10301 218 aa9.76□□□□□ -0.85
TRIM40-205ENST00000307859 DAOP14920 347 aa9.76□□□□□ -0.85
TRIM40-205ENST00000307859 NFYBP25208 207 aa9.76□□□□□ -0.85
TRIM40-205ENST00000307859 ZNF816Q0VGE8 651 aaPredicted RBP9.76□□□□□ -0.85
TRIM40-205ENST00000307859 MIDNQ504T8 468 aa9.76□□□□□ -0.85
TRIM40-205ENST00000307859 RPL39P5Q59GN2 51 aa9.76□□□□□ -0.85
TRIM40-205ENST00000307859 RPL7L1Q6DKI1 246 aaKnown RBP9.76□□□□□ -0.85
TRIM40-205ENST00000307859 SLC25A48Q6ZT89 311 aaKnown RBP9.76□□□□□ -0.85
TRIM40-205ENST00000307859 NEU4Q8WWR8 484 aaPredicted RBP9.76□□□□□ -0.85
TRIM40-205ENST00000307859 DDB2Q92466 427 aa9.76□□□□□ -0.85
TRIM40-205ENST00000307859 ZNF251Q9BRH9 671 aa9.76□□□□□ -0.85
TRIM40-205ENST00000307859 MAGT1Q9H0U3 335 aa9.76□□□□□ -0.85
TRIM40-205ENST00000307859 SAA2-SAA4A0A096LPE2 208 aa9.75□□□□□ -0.85
TRIM40-205ENST00000307859 IGSF23A1L1A6 192 aa9.75□□□□□ -0.85
TRIM40-205ENST00000307859 LYNX1G3V0Z9 82 aa9.75□□□□□ -0.85
TRIM40-205ENST00000307859 C19orf84I3L1E1 186 aa9.75□□□□□ -0.85
TRIM40-205ENST00000307859 WRBO00258 174 aa9.75□□□□□ -0.85
TRIM40-205ENST00000307859 RAB29O14966 203 aa9.75□□□□□ -0.85
TRIM40-205ENST00000307859 JTBO76095 146 aa9.75□□□□□ -0.85
TRIM40-205ENST00000307859 IGHV3-7P01780 117 aa9.75□□□□□ -0.85
TRIM40-205ENST00000307859 SAA2P0DJI9 122 aaPredicted RBP9.75□□□□□ -0.85
TRIM40-205ENST00000307859 LYNX1P0DP58 116 aa9.75□□□□□ -0.85
TRIM40-205ENST00000307859 CCL3L1P16619 93 aa9.75□□□□□ -0.85
TRIM40-205ENST00000307859 G6PCP35575 357 aa9.75□□□□□ -0.85
TRIM40-205ENST00000307859 KIR2DS2P43631 304 aa9.75□□□□□ -0.85
TRIM40-205ENST00000307859 PAX9P55771 341 aa9.75□□□□□ -0.85
TRIM40-205ENST00000307859 DLX6P56179 175 aa9.75□□□□□ -0.85
TRIM40-205ENST00000307859 LINC00205P59089 165 aa9.75□□□□□ -0.85
TRIM40-205ENST00000307859 VAMP2P63027 116 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms