RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 TMEM95Q3KNT9 176 aa8.75□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 OVCH2Q7RTZ1 564 aa8.75□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 SLC35E3Q7Z769 313 aa8.75□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 FOXRED2Q8IWF2 684 aa8.75□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 Q8N9W7 124 aa8.75□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 ZNF383Q8NA42 475 aa8.75□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 OR52I2Q8NH67 350 aa8.75□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 GIMAP1Q8WWP7 306 aa8.75□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 FLYWCH2Q96CP2 140 aaKnown RBP8.75□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 DGCR14Q96DF8 476 aaKnown RBP8.75□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 ZNF2Q9BSG1 426 aaPredicted RBP8.75□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 SLC5A7Q9GZV3 580 aa8.75□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 PRELID3BQ9Y3B1 194 aa8.75□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 A3GALT2U3KPV4 340 aa8.75□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 FBN1P35555 2871 aaKnown RBP8.75□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 DPPA5A6NC42 116 aa8.74□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 FABP12A6NFH5 140 aa8.74□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 CTDSPLO15194 276 aa8.74□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 SPDEFO95238 335 aa8.74□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 AMY1AP04745 511 aa8.74□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 AMY2AP04746 511 aa8.74□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 IFNA6P05013 189 aa8.74□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 DUTP33316 252 aaKnown RBP8.74□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 F2RL1P55085 397 aa8.74□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 TAS2R19P59542 299 aa8.74□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 SSBP1Q04837 148 aaKnown RBP8.74□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 CATR1Q13166 79 aa8.74□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 MSMO1Q15800 293 aa8.74□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 RNASE10Q5GAN6 216 aaKnown RBP8.74□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 FAM71E2Q8N5Q1 922 aa8.74□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 ZBTB34Q8NCN2 500 aa8.74□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 BVESQ8NE79 360 aa8.74□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 OR6F1Q8NGZ6 308 aa8.74□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 SMIM4Q8WVI0 70 aa8.74□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 TCTEX1D2Q8WW35 142 aa8.74□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 C5orf30Q96GV9 206 aa8.74□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 HARBI1Q96MB7 349 aa8.74□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 ABHD1Q96SE0 405 aa8.74□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 TSNAXQ99598 290 aaKnown RBP8.74□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 HSD17B10Q99714 261 aaKnown RBP8.74□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 RNF5Q99942 180 aa8.74□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 KLK11Q9UBX7 282 aa8.74□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 MTFP1Q9UDX5 166 aa8.74□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 RBMX2Q9Y388 322 aaKnown RBP8.74□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 RRHO14718 337 aa8.73□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 SHOXO15266 292 aa8.73□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 PROP1O75360 226 aa8.73□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 NDUFA3O95167 84 aa8.73□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 CSF1P09603 554 aa8.73□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 TBPP20226 339 aa8.73□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 CNTFRP26992 372 aa8.73□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 S100GP29377 79 aa8.73□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 TNFSF8P32971 234 aa8.73□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 DGCR2P98153 550 aa8.73□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 VAX1Q5SQQ9 334 aa8.73□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 ZNF66Q6ZN08 573 aa8.73□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 Q6ZS46 218 aa8.73□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 CENPVQ7Z7K6 275 aaPredicted RBP8.73□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 MOB3AQ96BX8 217 aa8.73□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 CCL28Q9NRJ3 127 aa8.73□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 SERTAD4Q9NUC0 356 aa8.73□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 TAS2R8Q9NYW2 309 aa8.73□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 ZNF107Q9UII5 783 aaPredicted RBP8.73□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 COL6A5A8TX70 2615 aa8.72□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 M0QYG6 137 aa8.72□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 AP4M1O00189 453 aa8.72□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 TNFSF12O43508 249 aa8.72□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 FCGR3BO75015 233 aa8.72□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 FBXO24O75426 580 aa8.72□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 RAB3DO95716 219 aa8.72□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 CRYZL1O95825 349 aa8.72□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 IGHG2P01859 326 aa8.72□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 CD3DP04234 171 aa8.72□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 IGKV1-16P04430 117 aa8.72□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 KIR2DS2P43631 304 aa8.72□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 LINC00205P59089 165 aa8.72□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 SLC35B1P78383 322 aa8.72□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 C5orf64Q2M2E5 130 aa8.72□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 VMA21Q3ZAQ7 101 aa8.72□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 PYDC2Q56P42 97 aa8.72□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 OR2B11Q5JQS5 317 aa8.72□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 SPANXN2Q5MJ10 180 aa8.72□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 LPCAT3Q6P1A2 487 aa8.72□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 DHRS11Q6UWP2 260 aa8.72□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 LYSMD2Q8IV50 215 aa8.72□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 TMEM229BQ8NBD8 167 aa8.72□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 NPBQ8NG41 125 aa8.72□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 OR4X2Q8NGF9 303 aa8.72□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 OR4S2Q8NH73 311 aa8.72□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 CHPT1Q8WUD6 406 aa8.72□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 RBMXL1Q96E39 390 aaKnown RBP8.72□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 CITED1Q99966 193 aa8.72□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 GON7Q9BXV9 100 aa8.72□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 FXYD6Q9H0Q3 95 aa8.72□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 PLSCR3Q9NRY6 295 aa8.72□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 METTL1Q9UBP6 276 aaKnown RBP8.72□□□□□ -1.01
CSPG4P1Y-201ENST00000306641 PSMB11A5LHX3 300 aa8.71□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 LINC00473A8K010 186 aa8.71□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 GSTZ1O43708 216 aaPredicted RBP8.71□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 SLC25A17O43808 307 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms