RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 RBPMS2Q6ZRY4 209 aaKnown RBP7.78□□□□□ -1.16
PTPRE-202ENST00000306042 OR2A7Q96R45 310 aa7.78□□□□□ -1.16
PTPRE-202ENST00000306042 PRR13Q9NZ81 148 aa7.78□□□□□ -1.16
PTPRE-202ENST00000306042 PHF3Q92576 2039 aaKnown RBP7.78□□□□□ -1.16
PTPRE-202ENST00000306042 ATP6V1FQ16864 119 aa7.78□□□□□ -1.16
PTPRE-202ENST00000306042 OR5C1Q8NGR4 320 aa7.78□□□□□ -1.16
PTPRE-202ENST00000306042 MALSU1Q96EH3 234 aa7.78□□□□□ -1.16
PTPRE-202ENST00000306042 PATZ1Q9HBE1 687 aaKnown RBP7.78□□□□□ -1.16
PTPRE-202ENST00000306042 IL36RNQ9UBH0 155 aa7.78□□□□□ -1.16
PTPRE-202ENST00000306042 MED13LQ71F56 2210 aa7.78□□□□□ -1.16
PTPRE-202ENST00000306042 FAM24AA6NFZ4 105 aa7.78□□□□□ -1.16
PTPRE-202ENST00000306042 OXA1LQ15070 435 aa7.78□□□□□ -1.16
PTPRE-202ENST00000306042 FAM106AQ4KMX7 169 aa7.78□□□□□ -1.16
PTPRE-202ENST00000306042 HCP5Q6MZN7 132 aa7.78□□□□□ -1.16
PTPRE-202ENST00000306042 KCNRGQ8N5I3 272 aa7.78□□□□□ -1.16
PTPRE-202ENST00000306042 PRSS22Q9GZN4 317 aa7.78□□□□□ -1.16
PTPRE-202ENST00000306042 TMEM133Q9H2Q1 129 aa7.78□□□□□ -1.16
PTPRE-202ENST00000306042 TMA7Q9Y2S6 64 aaKnown RBP7.78□□□□□ -1.16
PTPRE-202ENST00000306042 CDS2O95674 445 aa7.77□□□□□ -1.17
PTPRE-202ENST00000306042 F12P00748 615 aaPredicted RBP7.77□□□□□ -1.17
PTPRE-202ENST00000306042 COL8A2P25067 703 aa7.77□□□□□ -1.17
PTPRE-202ENST00000306042 CORTO00230 105 aa7.77□□□□□ -1.17
PTPRE-202ENST00000306042 S100A2P29034 98 aa7.77□□□□□ -1.17
PTPRE-202ENST00000306042 PRB3Q04118 309 aaPredicted RBP7.77□□□□□ -1.17
PTPRE-202ENST00000306042 COLCA1Q6ZS62 124 aa7.77□□□□□ -1.17
PTPRE-202ENST00000306042 LYZL2Q7Z4W2 148 aa7.77□□□□□ -1.17
PTPRE-202ENST00000306042 WFDC3Q8IUB2 231 aa7.77□□□□□ -1.17
PTPRE-202ENST00000306042 DMRTC2Q8IXT2 367 aaPredicted RBP7.77□□□□□ -1.17
PTPRE-202ENST00000306042 C15orf54Q8N8G6 183 aa7.77□□□□□ -1.17
PTPRE-202ENST00000306042 GTF3AQ92664 365 aaKnown RBP7.77□□□□□ -1.17
PTPRE-202ENST00000306042 MED9Q9NWA0 146 aa7.77□□□□□ -1.17
PTPRE-202ENST00000306042 LRRK1Q38SD2 2015 aa7.77□□□□□ -1.17
PTPRE-202ENST00000306042 MED13Q9UHV7 2174 aa7.77□□□□□ -1.17
PTPRE-202ENST00000306042 DUXBA0A1W2PPF3 345 aa7.77□□□□□ -1.17
PTPRE-202ENST00000306042 KIAA1324LA8MWY0 1029 aaPredicted RBP7.77□□□□□ -1.17
PTPRE-202ENST00000306042 H0Y980 276 aa7.77□□□□□ -1.17
PTPRE-202ENST00000306042 P2RY4P51582 365 aa7.77□□□□□ -1.17
PTPRE-202ENST00000306042 C3orf36Q3SXR2 165 aa7.77□□□□□ -1.17
PTPRE-202ENST00000306042 TMEM255AQ5JRV8 349 aa7.77□□□□□ -1.17
PTPRE-202ENST00000306042 LFNGQ8NES3 379 aa7.77□□□□□ -1.17
PTPRE-202ENST00000306042 SPOCK3Q9BQ16 436 aa7.77□□□□□ -1.17
PTPRE-202ENST00000306042 TUBA4BQ9H853 241 aa7.77□□□□□ -1.17
PTPRE-202ENST00000306042 MDFIC2A0A1B0GVS7 189 aa7.77□□□□□ -1.17
PTPRE-202ENST00000306042 NPIPB11E5RHQ5 1161 aa7.77□□□□□ -1.17
PTPRE-202ENST00000306042 HLA-DQB1P01920 261 aa7.77□□□□□ -1.17
PTPRE-202ENST00000306042 SLC25A4P12235 298 aa7.77□□□□□ -1.17
PTPRE-202ENST00000306042 TMEM50BP56557 158 aa7.77□□□□□ -1.17
PTPRE-202ENST00000306042 ATP5G2Q06055 141 aa7.77□□□□□ -1.17
PTPRE-202ENST00000306042 FFAR4Q5NUL3 377 aa7.77□□□□□ -1.17
PTPRE-202ENST00000306042 PXDC1Q5TGL8 231 aa7.77□□□□□ -1.17
PTPRE-202ENST00000306042 COMMD7Q86VX2 200 aa7.77□□□□□ -1.17
PTPRE-202ENST00000306042 TMED6Q8WW62 240 aa7.77□□□□□ -1.17
PTPRE-202ENST00000306042 SLC25A38Q96DW6 304 aa7.77□□□□□ -1.17
PTPRE-202ENST00000306042 MLXQ9UH92 298 aa7.77□□□□□ -1.17
PTPRE-202ENST00000306042 A0A1B0GUS0 222 aa7.76□□□□□ -1.17
PTPRE-202ENST00000306042 TPPP2P59282 170 aa7.76□□□□□ -1.17
PTPRE-202ENST00000306042 UBE2G2P60604 165 aa7.76□□□□□ -1.17
PTPRE-202ENST00000306042 RPL39P5Q59GN2 51 aa7.76□□□□□ -1.17
PTPRE-202ENST00000306042 C11orf87Q6NUJ2 197 aa7.76□□□□□ -1.17
PTPRE-202ENST00000306042 OR5M8Q8NGP6 311 aa7.76□□□□□ -1.17
PTPRE-202ENST00000306042 OR4A5Q8NH83 315 aa7.76□□□□□ -1.17
PTPRE-202ENST00000306042 TM2D1Q9BX74 207 aa7.76□□□□□ -1.17
PTPRE-202ENST00000306042 TMEM140Q9NV12 185 aa7.76□□□□□ -1.17
PTPRE-202ENST00000306042 MFNGO00587 321 aa7.76□□□□□ -1.17
PTPRE-202ENST00000306042 ICMTO60725 284 aa7.76□□□□□ -1.17
PTPRE-202ENST00000306042 PGLYRP1O75594 196 aaPredicted RBP7.76□□□□□ -1.17
PTPRE-202ENST00000306042 MOSP00540 346 aa7.76□□□□□ -1.17
PTPRE-202ENST00000306042 GRNP28799 593 aaKnown RBP7.76□□□□□ -1.17
PTPRE-202ENST00000306042 CMC4P56277 68 aaPredicted RBP7.76□□□□□ -1.17
PTPRE-202ENST00000306042 SSTP61278 116 aa7.76□□□□□ -1.17
PTPRE-202ENST00000306042 SLC24A4Q8NFF2 622 aa7.76□□□□□ -1.17
PTPRE-202ENST00000306042 FRZBQ92765 325 aa7.76□□□□□ -1.17
PTPRE-202ENST00000306042 TFF1P04155 84 aa7.76□□□□□ -1.17
PTPRE-202ENST00000306042 COMPP49747 757 aaPredicted RBP7.76□□□□□ -1.17
PTPRE-202ENST00000306042 KLF9Q13886 244 aaPredicted RBP7.76□□□□□ -1.17
PTPRE-202ENST00000306042 LAIR2Q6ISS4 152 aa7.76□□□□□ -1.17
PTPRE-202ENST00000306042 MAPK1IP1LQ8NDC0 245 aa7.76□□□□□ -1.17
PTPRE-202ENST00000306042 SLC25A32Q9H2D1 315 aa7.76□□□□□ -1.17
PTPRE-202ENST00000306042 GNG13Q9P2W3 67 aa7.76□□□□□ -1.17
PTPRE-202ENST00000306042 SLC45A2Q9UMX9 530 aa7.76□□□□□ -1.17
PTPRE-202ENST00000306042 WSB1Q9Y6I7 421 aa7.76□□□□□ -1.17
PTPRE-202ENST00000306042 V9GYH0 126 aa7.76□□□□□ -1.17
PTPRE-202ENST00000306042 IGKV1-9A0A0C4DH69 117 aa7.76□□□□□ -1.17
PTPRE-202ENST00000306042 UBE2KP61086 200 aa7.76□□□□□ -1.17
PTPRE-202ENST00000306042 UNC119Q13432 240 aa7.76□□□□□ -1.17
PTPRE-202ENST00000306042 RPEL1Q2QD12 228 aa7.76□□□□□ -1.17
PTPRE-202ENST00000306042 ADAD2Q8NCV1 583 aaKnown RBP7.76□□□□□ -1.17
PTPRE-202ENST00000306042 SPSB4Q96A44 273 aa7.76□□□□□ -1.17
PTPRE-202ENST00000306042 QTRT1Q9BXR0 403 aaKnown RBP7.76□□□□□ -1.17
PTPRE-202ENST00000306042 MMP24Q9Y5R2 645 aa7.76□□□□□ -1.17
PTPRE-202ENST00000306042 MARCH11A6NNE9 402 aa7.75□□□□□ -1.17
PTPRE-202ENST00000306042 PRR32B1ATL7 298 aa7.75□□□□□ -1.17
PTPRE-202ENST00000306042 J3QLI3 93 aa7.75□□□□□ -1.17
PTPRE-202ENST00000306042 S100A4P26447 101 aaKnown RBP7.75□□□□□ -1.17
PTPRE-202ENST00000306042 AKR1C3P42330 323 aa7.75□□□□□ -1.17
PTPRE-202ENST00000306042 AKR1D1P51857 326 aa7.75□□□□□ -1.17
PTPRE-202ENST00000306042 SPCS3P61009 180 aa7.75□□□□□ -1.17
PTPRE-202ENST00000306042 FOXL2NBQ6ZUU3 175 aa7.75□□□□□ -1.17
PTPRE-202ENST00000306042 BAP18Q8IXM2 172 aa7.75□□□□□ -1.17
PTPRE-202ENST00000306042 DRAM1Q8N682 238 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms