RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 ST6GALNAC5Q9BVH7 336 aa20.66■□□□□ 0.9
CDKN2A-201ENST00000304494 SLC35D1Q9NTN3 355 aa20.66■□□□□ 0.9
CDKN2A-201ENST00000304494 SDHAF2Q9NX18 166 aa20.66■□□□□ 0.9
CDKN2A-201ENST00000304494 METTL1Q9UBP6 276 aaKnown RBP20.66■□□□□ 0.9
CDKN2A-201ENST00000304494 TGP01266 2768 aa20.66■□□□□ 0.9
CDKN2A-201ENST00000304494 TMEM127O75204 238 aa20.65■□□□□ 0.9
CDKN2A-201ENST00000304494 TNFAIP8O95379 198 aa20.65■□□□□ 0.9
CDKN2A-201ENST00000304494 CLEC2LP0C7M8 214 aa20.65■□□□□ 0.9
CDKN2A-201ENST00000304494 GNG2P59768 71 aa20.65■□□□□ 0.9
CDKN2A-201ENST00000304494 TAGLNQ01995 201 aaKnown RBP20.65■□□□□ 0.9
CDKN2A-201ENST00000304494 CBX3Q13185 183 aa20.65■□□□□ 0.9
CDKN2A-201ENST00000304494 IDNKQ5T6J7 187 aa20.65■□□□□ 0.9
CDKN2A-201ENST00000304494 TCTEX1D1Q8N7M0 179 aa20.65■□□□□ 0.9
CDKN2A-201ENST00000304494 MINDY2Q8NBR6 621 aa20.65■□□□□ 0.9
CDKN2A-201ENST00000304494 MRAPQ8TCY5 172 aa20.65■□□□□ 0.9
CDKN2A-201ENST00000304494 MYOZ3Q8TDC0 251 aa20.65■□□□□ 0.9
CDKN2A-201ENST00000304494 DUX3Q96PT4 197 aa20.65■□□□□ 0.9
CDKN2A-201ENST00000304494 A0A087WXM4 84 aa20.64■□□□□ 0.89
CDKN2A-201ENST00000304494 CTXN2P0C2S0 81 aa20.64■□□□□ 0.89
CDKN2A-201ENST00000304494 LINC00205P59089 165 aa20.64■□□□□ 0.89
CDKN2A-201ENST00000304494 TMEM267Q0VDI3 215 aaPredicted RBP20.64■□□□□ 0.89
CDKN2A-201ENST00000304494 ZNF260Q3ZCT1 412 aa20.64■□□□□ 0.89
CDKN2A-201ENST00000304494 H1FOOQ8IZA3 346 aaPredicted RBP20.64■□□□□ 0.89
CDKN2A-201ENST00000304494 ABHD5Q8WTS1 349 aa20.64■□□□□ 0.89
CDKN2A-201ENST00000304494 UBE2E2Q96LR5 201 aa20.64■□□□□ 0.89
CDKN2A-201ENST00000304494 IGKV1D-8A0A087WSZ0 117 aa20.63■□□□□ 0.89
CDKN2A-201ENST00000304494 TMEM235A6NFC5 223 aa20.63■□□□□ 0.89
CDKN2A-201ENST00000304494 FCN1O00602 326 aa20.63■□□□□ 0.89
CDKN2A-201ENST00000304494 RAB25P57735 213 aa20.63■□□□□ 0.89
CDKN2A-201ENST00000304494 NDPQ00604 133 aa20.63■□□□□ 0.89
CDKN2A-201ENST00000304494 ECSCRQ19T08 205 aa20.63■□□□□ 0.89
CDKN2A-201ENST00000304494 DEFB136Q30KP8 78 aa20.63■□□□□ 0.89
CDKN2A-201ENST00000304494 ZNF562Q6V9R5 426 aa20.63■□□□□ 0.89
CDKN2A-201ENST00000304494 TSPAN14Q8NG11 270 aa20.63■□□□□ 0.89
CDKN2A-201ENST00000304494 NUDCD2Q8WVJ2 157 aa20.63■□□□□ 0.89
CDKN2A-201ENST00000304494 LGALS7P47929 136 aa20.62■□□□□ 0.89
CDKN2A-201ENST00000304494 CLCC1Q96S66 551 aa20.62■□□□□ 0.89
CDKN2A-201ENST00000304494 KLK15Q9H2R5 256 aa20.62■□□□□ 0.89
CDKN2A-201ENST00000304494 FOXA2Q9Y261 457 aaPredicted RBP20.62■□□□□ 0.89
CDKN2A-201ENST00000304494 VSIG4Q9Y279 399 aa20.62■□□□□ 0.89
CDKN2A-201ENST00000304494 FBXO7Q9Y3I1 522 aa20.62■□□□□ 0.89
CDKN2A-201ENST00000304494 A0A0A6YYH2 397 aa20.61■□□□□ 0.89
CDKN2A-201ENST00000304494 A0A1W2PN81 502 aa20.61■□□□□ 0.89
CDKN2A-201ENST00000304494 A6NJ64 397 aa20.61■□□□□ 0.89
CDKN2A-201ENST00000304494 RRASP10301 218 aa20.61■□□□□ 0.89
CDKN2A-201ENST00000304494 CHRNA7P36544 502 aa20.61■□□□□ 0.89
CDKN2A-201ENST00000304494 RAB9AP51151 201 aa20.61■□□□□ 0.89
CDKN2A-201ENST00000304494 EGFEM1PQ0D2K5 195 aa20.61■□□□□ 0.89
CDKN2A-201ENST00000304494 RTL8BQ17RB0 113 aa20.61■□□□□ 0.89
CDKN2A-201ENST00000304494 C19orf54Q5BKX5 351 aa20.61■□□□□ 0.89
CDKN2A-201ENST00000304494 CROCCP3Q8IVE0 287 aa20.61■□□□□ 0.89
CDKN2A-201ENST00000304494 ZNF491Q8N8L2 437 aa20.61■□□□□ 0.89
CDKN2A-201ENST00000304494 OR5M8Q8NGP6 311 aa20.61■□□□□ 0.89
CDKN2A-201ENST00000304494 ADTRPQ96IZ2 230 aa20.61■□□□□ 0.89
CDKN2A-201ENST00000304494 NUBP2Q9Y5Y2 271 aa20.61■□□□□ 0.89
CDKN2A-201ENST00000304494 A3GALT2U3KPV4 340 aa20.61■□□□□ 0.89
CDKN2A-201ENST00000304494 SLC25A17O43808 307 aa20.6■□□□□ 0.89
CDKN2A-201ENST00000304494 CA2P00918 260 aa20.6■□□□□ 0.89
CDKN2A-201ENST00000304494 AKIRIN2Q53H80 203 aa20.6■□□□□ 0.89
CDKN2A-201ENST00000304494 PYHIN1Q6K0P9 492 aa20.6■□□□□ 0.89
CDKN2A-201ENST00000304494 CNIH2Q6PI25 160 aa20.6■□□□□ 0.89
CDKN2A-201ENST00000304494 PPP1R27Q86WC6 154 aa20.6■□□□□ 0.89
CDKN2A-201ENST00000304494 OR5H6Q8NGV6 325 aa20.6■□□□□ 0.89
CDKN2A-201ENST00000304494 SLC25A38Q96DW6 304 aa20.6■□□□□ 0.89
CDKN2A-201ENST00000304494 AIREO43918 545 aa20.59■□□□□ 0.89
CDKN2A-201ENST00000304494 EGR2P11161 476 aaPredicted RBP20.59■□□□□ 0.89
CDKN2A-201ENST00000304494 HOXD3P31249 432 aaPredicted RBP20.59■□□□□ 0.89
CDKN2A-201ENST00000304494 RUNX1Q01196 453 aa20.59■□□□□ 0.89
CDKN2A-201ENST00000304494 KIAA0141Q14154 515 aaPredicted RBP20.59■□□□□ 0.89
CDKN2A-201ENST00000304494 C5orf30Q96GV9 206 aa20.59■□□□□ 0.89
CDKN2A-201ENST00000304494 HARBI1Q96MB7 349 aa20.59■□□□□ 0.89
CDKN2A-201ENST00000304494 ZMAT5Q9UDW3 170 aaKnown RBP20.59■□□□□ 0.89
CDKN2A-201ENST00000304494 SPATA2Q9UM82 520 aa20.59■□□□□ 0.89
CDKN2A-201ENST00000304494 SSX5O60225 188 aa20.58■□□□□ 0.89
CDKN2A-201ENST00000304494 LUMP51884 338 aaPredicted RBP20.58■□□□□ 0.89
CDKN2A-201ENST00000304494 KRTAP10-11P60412 298 aa20.58■□□□□ 0.89
CDKN2A-201ENST00000304494 FHL3Q13643 280 aa20.58■□□□□ 0.89
CDKN2A-201ENST00000304494 ACTBL2Q562R1 376 aa20.58■□□□□ 0.89
CDKN2A-201ENST00000304494 UNQ5815/PRO19632Q6UWF5 114 aa20.58■□□□□ 0.89
CDKN2A-201ENST00000304494 BVESQ8NE79 360 aa20.58■□□□□ 0.89
CDKN2A-201ENST00000304494 OR11H1Q8NG94 326 aa20.58■□□□□ 0.89
CDKN2A-201ENST00000304494 ARPC1AQ92747 370 aa20.58■□□□□ 0.89
CDKN2A-201ENST00000304494 YIPF6Q96EC8 236 aa20.58■□□□□ 0.89
CDKN2A-201ENST00000304494 GNB4Q9HAV0 340 aa20.58■□□□□ 0.89
CDKN2A-201ENST00000304494 DIABLOQ9NR28 239 aa20.58■□□□□ 0.89
CDKN2A-201ENST00000304494 ANXA10Q9UJ72 324 aa20.58■□□□□ 0.89
CDKN2A-201ENST00000304494 OR2W1Q9Y3N9 320 aa20.58■□□□□ 0.89
CDKN2A-201ENST00000304494 TRAV18A0A075B6X5 111 aa20.57■□□□□ 0.88
CDKN2A-201ENST00000304494 I3L521 148 aa20.57■□□□□ 0.88
CDKN2A-201ENST00000304494 SHOXO15266 292 aa20.57■□□□□ 0.88
CDKN2A-201ENST00000304494 SLC22A5O76082 557 aa20.57■□□□□ 0.88
CDKN2A-201ENST00000304494 CD40LGP29965 261 aa20.57■□□□□ 0.88
CDKN2A-201ENST00000304494 DUTP33316 252 aaKnown RBP20.57■□□□□ 0.88
CDKN2A-201ENST00000304494 TMEM177Q53S58 311 aa20.57■□□□□ 0.88
CDKN2A-201ENST00000304494 ZNF645Q8N7E2 425 aa20.57■□□□□ 0.88
CDKN2A-201ENST00000304494 FAM103A1Q9BTL3 118 aaKnown RBP20.57■□□□□ 0.88
CDKN2A-201ENST00000304494 TPSG1Q9NRR2 321 aa20.57■□□□□ 0.88
CDKN2A-201ENST00000304494 SOX15O60248 233 aa20.56■□□□□ 0.88
CDKN2A-201ENST00000304494 IGLV2-23P01705 113 aa20.56■□□□□ 0.88
CDKN2A-201ENST00000304494 HLA-DQB1P01920 261 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms