RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 LYPD2Q6UXB3 125 aa8.72□□□□□ -1.01
CLP1-201ENST00000302731 ODF3L1Q8IXM7 274 aa8.72□□□□□ -1.01
CLP1-201ENST00000302731 TMED6Q8WW62 240 aa8.72□□□□□ -1.01
CLP1-201ENST00000302731 NEU4Q8WWR8 484 aaPredicted RBP8.72□□□□□ -1.01
CLP1-201ENST00000302731 DDB2Q92466 427 aa8.72□□□□□ -1.01
CLP1-201ENST00000302731 SAT2Q96F10 170 aaPredicted RBP8.72□□□□□ -1.01
CLP1-201ENST00000302731 CXorf58Q96LI9 332 aa8.72□□□□□ -1.01
CLP1-201ENST00000302731 ZNF251Q9BRH9 671 aa8.72□□□□□ -1.01
CLP1-201ENST00000302731 GINS3Q9BRX5 216 aa8.72□□□□□ -1.01
CLP1-201ENST00000302731 REG4Q9BYZ8 158 aa8.72□□□□□ -1.01
CLP1-201ENST00000302731 CTSZQ9UBR2 303 aa8.72□□□□□ -1.01
CLP1-201ENST00000302731 HSPB7Q9UBY9 170 aa8.72□□□□□ -1.01
CLP1-201ENST00000302731 ARID1AO14497 2285 aa8.72□□□□□ -1.01
CLP1-201ENST00000302731 SAA2-SAA4A0A096LPE2 208 aa8.72□□□□□ -1.01
CLP1-201ENST00000302731 MARCH11A6NNE9 402 aa8.72□□□□□ -1.01
CLP1-201ENST00000302731 NUDT19A8MXV4 375 aa8.72□□□□□ -1.01
CLP1-201ENST00000302731 SLC31A2O15432 143 aa8.72□□□□□ -1.01
CLP1-201ENST00000302731 TXNL1O43396 289 aa8.72□□□□□ -1.01
CLP1-201ENST00000302731 KRASP01116 189 aa8.72□□□□□ -1.01
CLP1-201ENST00000302731 IGHV2-70P01814 119 aa8.72□□□□□ -1.01
CLP1-201ENST00000302731 SAA2P0DJI9 122 aaPredicted RBP8.72□□□□□ -1.01
CLP1-201ENST00000302731 G6PCP35575 357 aa8.72□□□□□ -1.01
CLP1-201ENST00000302731 UQCRFS1P47985 274 aa8.72□□□□□ -1.01
CLP1-201ENST00000302731 SULT1A2P50226 295 aa8.72□□□□□ -1.01
CLP1-201ENST00000302731 AANATQ16613 207 aa8.72□□□□□ -1.01
CLP1-201ENST00000302731 AARDQ4LEZ3 155 aa8.72□□□□□ -1.01
CLP1-201ENST00000302731 H2BFWTQ7Z2G1 175 aa8.72□□□□□ -1.01
CLP1-201ENST00000302731 STX12Q86Y82 276 aa8.72□□□□□ -1.01
CLP1-201ENST00000302731 ZNF596Q8TC21 504 aa8.72□□□□□ -1.01
CLP1-201ENST00000302731 S1PR3Q99500 378 aa8.72□□□□□ -1.01
CLP1-201ENST00000302731 SESN1Q9Y6P5 492 aa8.72□□□□□ -1.01
CLP1-201ENST00000302731 ANKHD1Q8IWZ3 2542 aaKnown RBP8.71□□□□□ -1.01
CLP1-201ENST00000302731 A0A087X0M5 115 aa8.71□□□□□ -1.02
CLP1-201ENST00000302731 A0A1B0GX30 115 aa8.71□□□□□ -1.02
CLP1-201ENST00000302731 MMP23AO75900 390 aa8.71□□□□□ -1.02
CLP1-201ENST00000302731 DANCRP0C864 163 aa8.71□□□□□ -1.02
CLP1-201ENST00000302731 SPP1P10451 314 aa8.71□□□□□ -1.02
CLP1-201ENST00000302731 IGFBP2P18065 325 aa8.71□□□□□ -1.02
CLP1-201ENST00000302731 COL8A2P25067 703 aa8.71□□□□□ -1.02
CLP1-201ENST00000302731 NFYBP25208 207 aa8.71□□□□□ -1.02
CLP1-201ENST00000302731 SULT1A1P50225 295 aa8.71□□□□□ -1.02
CLP1-201ENST00000302731 UBE2KP61086 200 aa8.71□□□□□ -1.02
CLP1-201ENST00000302731 TNFRSF9Q07011 255 aa8.71□□□□□ -1.02
CLP1-201ENST00000302731 IZUMO4Q1ZYL8 232 aa8.71□□□□□ -1.02
CLP1-201ENST00000302731 TMEM155Q4W5P6 130 aa8.71□□□□□ -1.02
CLP1-201ENST00000302731 RPL39P5Q59GN2 51 aa8.71□□□□□ -1.02
CLP1-201ENST00000302731 OR2B11Q5JQS5 317 aa8.71□□□□□ -1.02
CLP1-201ENST00000302731 PRAMEF5Q5TYX0 476 aa8.71□□□□□ -1.02
CLP1-201ENST00000302731 FAM71F2Q6NXP2 309 aa8.71□□□□□ -1.02
CLP1-201ENST00000302731 ZNF295-AS1Q8N0V1 137 aa8.71□□□□□ -1.02
CLP1-201ENST00000302731 STPG2Q8N412 459 aa8.71□□□□□ -1.02
CLP1-201ENST00000302731 LINC00311Q8N616 119 aa8.71□□□□□ -1.02
CLP1-201ENST00000302731 OR4S2Q8NH73 311 aa8.71□□□□□ -1.02
CLP1-201ENST00000302731 R3HDM4Q96D70 268 aa8.71□□□□□ -1.02
CLP1-201ENST00000302731 BSCL2Q96G97 398 aaPredicted RBP8.71□□□□□ -1.02
CLP1-201ENST00000302731 SMIM3Q9BZL3 60 aa8.71□□□□□ -1.02
CLP1-201ENST00000302731 WFDC1Q9HC57 220 aa8.71□□□□□ -1.02
CLP1-201ENST00000302731 USF3Q68DE3 2245 aa8.71□□□□□ -1.02
CLP1-201ENST00000302731 ROS1P08922 2347 aa8.71□□□□□ -1.02
CLP1-201ENST00000302731 CHD8Q9HCK8 2581 aa8.71□□□□□ -1.02
CLP1-201ENST00000302731 DIDO1Q9BTC0 2240 aaKnown RBP8.7□□□□□ -1.02
CLP1-201ENST00000302731 COL6A6A6NMZ7 2263 aa8.7□□□□□ -1.02
CLP1-201ENST00000302731 FCGR3BO75015 233 aa8.7□□□□□ -1.02
CLP1-201ENST00000302731 DFFBO76075 338 aa8.7□□□□□ -1.02
CLP1-201ENST00000302731 GOSR1O95249 250 aa8.7□□□□□ -1.02
CLP1-201ENST00000302731 FGF2P09038 288 aa8.7□□□□□ -1.02
CLP1-201ENST00000302731 NQO2P16083 231 aa8.7□□□□□ -1.02
CLP1-201ENST00000302731 RAB5CP51148 216 aa8.7□□□□□ -1.02
CLP1-201ENST00000302731 DLX6P56179 175 aa8.7□□□□□ -1.02
CLP1-201ENST00000302731 BLOC1S1P78537 153 aa8.7□□□□□ -1.02
CLP1-201ENST00000302731 TAGLNQ01995 201 aaKnown RBP8.7□□□□□ -1.02
CLP1-201ENST00000302731 UTF1Q5T230 341 aa8.7□□□□□ -1.02
CLP1-201ENST00000302731 LYG1Q8N1E2 194 aa8.7□□□□□ -1.02
CLP1-201ENST00000302731 OR52E5Q8NH55 327 aa8.7□□□□□ -1.02
CLP1-201ENST00000302731 H1FXQ92522 213 aaKnown RBP8.7□□□□□ -1.02
CLP1-201ENST00000302731 CIB3Q96Q77 187 aaPredicted RBP8.7□□□□□ -1.02
CLP1-201ENST00000302731 PSENENQ9NZ42 101 aa8.7□□□□□ -1.02
CLP1-201ENST00000302731 RALYQ9UKM9 306 aaKnown RBP8.7□□□□□ -1.02
CLP1-201ENST00000302731 PKDREJQ9NTG1 2253 aa8.7□□□□□ -1.02
CLP1-201ENST00000302731 A0A1W2PPH5 198 aa8.69□□□□□ -1.02
CLP1-201ENST00000302731 RAB19A4D1S5 217 aa8.69□□□□□ -1.02
CLP1-201ENST00000302731 A8MXK9 166 aa8.69□□□□□ -1.02
CLP1-201ENST00000302731 I3L521 148 aa8.69□□□□□ -1.02
CLP1-201ENST00000302731 SCAF4O95104 1147 aaKnown RBP8.69□□□□□ -1.02
CLP1-201ENST00000302731 NXPH3O95157 252 aa8.69□□□□□ -1.02
CLP1-201ENST00000302731 SOD3P08294 240 aa8.69□□□□□ -1.02
CLP1-201ENST00000302731 CCL3L1P16619 93 aa8.69□□□□□ -1.02
CLP1-201ENST00000302731 LINC00205P59089 165 aa8.69□□□□□ -1.02
CLP1-201ENST00000302731 ERVK-16P61578 105 aa8.69□□□□□ -1.02
CLP1-201ENST00000302731 POU2AF1Q16633 256 aa8.69□□□□□ -1.02
CLP1-201ENST00000302731 PDLIM3Q53GG5 364 aaPredicted RBP8.69□□□□□ -1.02
CLP1-201ENST00000302731 TOR2AQ5JU69 321 aa8.69□□□□□ -1.02
CLP1-201ENST00000302731 DHRS7BQ6IAN0 325 aaPredicted RBP8.69□□□□□ -1.02
CLP1-201ENST00000302731 CLEC9AQ6UXN8 241 aa8.69□□□□□ -1.02
CLP1-201ENST00000302731 ZNF841Q6ZN19 808 aa8.69□□□□□ -1.02
CLP1-201ENST00000302731 ZNF833PQ6ZTB9 187 aa8.69□□□□□ -1.02
CLP1-201ENST00000302731 OR1S2Q8NGQ3 325 aa8.69□□□□□ -1.02
CLP1-201ENST00000302731 OR5C1Q8NGR4 320 aa8.69□□□□□ -1.02
CLP1-201ENST00000302731 LEAP2Q969E1 77 aa8.69□□□□□ -1.02
CLP1-201ENST00000302731 TIMD4Q96H15 378 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms