RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 COL10A1Q03692 680 aa6.62□□□□□ -1.35
SF3B3-201ENST00000302516 KCNS1Q96KK3 526 aa6.62□□□□□ -1.35
SF3B3-201ENST00000302516 GPA33Q99795 319 aa6.62□□□□□ -1.35
SF3B3-201ENST00000302516 TMUB1Q9BVT8 246 aa6.62□□□□□ -1.35
SF3B3-201ENST00000302516 CA7P43166 264 aa6.62□□□□□ -1.35
SF3B3-201ENST00000302516 ZNF146Q15072 292 aa6.62□□□□□ -1.35
SF3B3-201ENST00000302516 CLEC5AQ9NY25 188 aa6.62□□□□□ -1.35
SF3B3-201ENST00000302516 PLA2G3Q9NZ20 509 aa6.62□□□□□ -1.35
SF3B3-201ENST00000302516 CHD3Q12873 2000 aaKnown RBP6.61□□□□□ -1.35
SF3B3-201ENST00000302516 TGIF2-C20orf24A0A0A6YYL0 155 aa6.61□□□□□ -1.35
SF3B3-201ENST00000302516 A8MXK9 166 aa6.61□□□□□ -1.35
SF3B3-201ENST00000302516 LGALS3P17931 250 aaKnown RBP6.61□□□□□ -1.35
SF3B3-201ENST00000302516 KCNMB1Q16558 191 aa6.61□□□□□ -1.35
SF3B3-201ENST00000302516 ZNF658BQ4V348 819 aaPredicted RBP6.61□□□□□ -1.35
SF3B3-201ENST00000302516 TMEM177Q53S58 311 aa6.61□□□□□ -1.35
SF3B3-201ENST00000302516 ZNF506Q5JVG8 444 aa6.61□□□□□ -1.35
SF3B3-201ENST00000302516 FAM53AQ6NSI3 398 aaPredicted RBP6.61□□□□□ -1.35
SF3B3-201ENST00000302516 NUDT3O95989 172 aa6.61□□□□□ -1.35
SF3B3-201ENST00000302516 LIPFP07098 398 aa6.61□□□□□ -1.35
SF3B3-201ENST00000302516 HBBP68871 147 aa6.61□□□□□ -1.35
SF3B3-201ENST00000302516 C21orf62-AS1Q17RA5 79 aa6.61□□□□□ -1.35
SF3B3-201ENST00000302516 TCF23Q7RTU1 214 aa6.61□□□□□ -1.35
SF3B3-201ENST00000302516 TMEM252Q8N6L7 170 aa6.61□□□□□ -1.35
SF3B3-201ENST00000302516 PRDM14Q9GZV8 571 aa6.61□□□□□ -1.35
SF3B3-201ENST00000302516 KLHDC2Q9Y2U9 406 aa6.61□□□□□ -1.35
SF3B3-201ENST00000302516 CRXO43186 299 aaPredicted RBP6.61□□□□□ -1.35
SF3B3-201ENST00000302516 KLK2P20151 261 aa6.61□□□□□ -1.35
SF3B3-201ENST00000302516 UNQ9370/PRO34162Q6UXP9 181 aa6.61□□□□□ -1.35
SF3B3-201ENST00000302516 SELENOHQ8IZQ5 122 aaKnown RBP6.61□□□□□ -1.35
SF3B3-201ENST00000302516 P2RY4P51582 365 aa6.61□□□□□ -1.35
SF3B3-201ENST00000302516 POC1AQ8NBT0 407 aa6.61□□□□□ -1.35
SF3B3-201ENST00000302516 RARRES2Q99969 163 aa6.61□□□□□ -1.35
SF3B3-201ENST00000302516 PRSS27Q9BQR3 290 aa6.61□□□□□ -1.35
SF3B3-201ENST00000302516 TSPAN7P41732 249 aa6.61□□□□□ -1.35
SF3B3-201ENST00000302516 GAB4Q2WGN9 574 aa6.61□□□□□ -1.35
SF3B3-201ENST00000302516 C19orf54Q5BKX5 351 aa6.61□□□□□ -1.35
SF3B3-201ENST00000302516 MS4A5Q9H3V2 200 aa6.61□□□□□ -1.35
SF3B3-201ENST00000302516 TMEM140Q9NV12 185 aa6.61□□□□□ -1.35
SF3B3-201ENST00000302516 RTP5Q14D33 572 aa6.61□□□□□ -1.35
SF3B3-201ENST00000302516 LHX8Q68G74 356 aa6.61□□□□□ -1.35
SF3B3-201ENST00000302516 Q6AWC8 147 aa6.61□□□□□ -1.35
SF3B3-201ENST00000302516 MMD2Q8IY49 270 aa6.61□□□□□ -1.35
SF3B3-201ENST00000302516 SLC25A38Q96DW6 304 aa6.61□□□□□ -1.35
SF3B3-201ENST00000302516 PLPPR2Q96GM1 343 aa6.61□□□□□ -1.35
SF3B3-201ENST00000302516 MARCH11A6NNE9 402 aa6.61□□□□□ -1.35
SF3B3-201ENST00000302516 B4E171 279 aa6.61□□□□□ -1.35
SF3B3-201ENST00000302516 F12P00748 615 aaPredicted RBP6.61□□□□□ -1.35
SF3B3-201ENST00000302516 TRGC1P0CF51 173 aa6.61□□□□□ -1.35
SF3B3-201ENST00000302516 H2BFSP57053 126 aa6.61□□□□□ -1.35
SF3B3-201ENST00000302516 RPL31P62899 125 aaKnown RBP6.61□□□□□ -1.35
SF3B3-201ENST00000302516 Q96M66 194 aa6.61□□□□□ -1.35
SF3B3-201ENST00000302516 SOD3P08294 240 aa6.61□□□□□ -1.35
SF3B3-201ENST00000302516 WDR25Q64LD2 544 aaPredicted RBP6.61□□□□□ -1.35
SF3B3-201ENST00000302516 ZNF841Q6ZN19 808 aa6.61□□□□□ -1.35
SF3B3-201ENST00000302516 ZNF502Q8TBZ5 544 aa6.61□□□□□ -1.35
SF3B3-201ENST00000302516 CHODLQ9H9P2 273 aa6.61□□□□□ -1.35
SF3B3-201ENST00000302516 MBD1Q9UIS9 605 aaPredicted RBP6.61□□□□□ -1.35
SF3B3-201ENST00000302516 SPTA1P02549 2419 aa6.6□□□□□ -1.35
SF3B3-201ENST00000302516 COX5BP10606 129 aa6.6□□□□□ -1.35
SF3B3-201ENST00000302516 SPINK14Q6IE38 97 aa6.6□□□□□ -1.35
SF3B3-201ENST00000302516 KCNK17Q96T54 332 aa6.6□□□□□ -1.35
SF3B3-201ENST00000302516 PLSCR2Q9NRY7 297 aa6.6□□□□□ -1.35
SF3B3-201ENST00000302516 UBE2L6O14933 153 aa6.6□□□□□ -1.35
SF3B3-201ENST00000302516 LINC00869P0C866 280 aa6.6□□□□□ -1.35
SF3B3-201ENST00000302516 EFNB1P98172 346 aa6.6□□□□□ -1.35
SF3B3-201ENST00000302516 RHOVQ96L33 236 aa6.6□□□□□ -1.35
SF3B3-201ENST00000302516 NDUFA2O43678 99 aa6.6□□□□□ -1.35
SF3B3-201ENST00000302516 IL4P05112 153 aa6.6□□□□□ -1.35
SF3B3-201ENST00000302516 PRDX2P32119 198 aa6.6□□□□□ -1.35
SF3B3-201ENST00000302516 PTGDSP41222 190 aa6.6□□□□□ -1.35
SF3B3-201ENST00000302516 ZNF137PP52743 207 aa6.6□□□□□ -1.35
SF3B3-201ENST00000302516 FAM216AQ8WUB2 273 aa6.6□□□□□ -1.35
SF3B3-201ENST00000302516 HIST1H2BAQ96A08 127 aa6.6□□□□□ -1.35
SF3B3-201ENST00000302516 TMEM56-RWDD3S4R434 201 aa6.6□□□□□ -1.35
SF3B3-201ENST00000302516 LOC389332A0A1B0GUA5 103 aa6.6□□□□□ -1.35
SF3B3-201ENST00000302516 A0A1W2PR80 420 aa6.6□□□□□ -1.35
SF3B3-201ENST00000302516 PRF1P14222 555 aa6.6□□□□□ -1.35
SF3B3-201ENST00000302516 HINT1P49773 126 aaPredicted RBP6.6□□□□□ -1.35
SF3B3-201ENST00000302516 RIPPLY2Q5TAB7 128 aa6.6□□□□□ -1.35
SF3B3-201ENST00000302516 DYNLRB2Q8TF09 96 aa6.6□□□□□ -1.35
SF3B3-201ENST00000302516 TLNRD1Q9H1K6 362 aa6.6□□□□□ -1.35
SF3B3-201ENST00000302516 HELZP42694 1942 aaKnown RBP6.6□□□□□ -1.35
SF3B3-201ENST00000302516 LOC107984156A0A0G2JMH3 177 aa6.6□□□□□ -1.35
SF3B3-201ENST00000302516 ARL17AQ8IVW1 177 aa6.6□□□□□ -1.35
SF3B3-201ENST00000302516 NEUROG1Q92886 237 aa6.6□□□□□ -1.35
SF3B3-201ENST00000302516 HEATR5AQ86XA9 2040 aa6.6□□□□□ -1.35
SF3B3-201ENST00000302516 A0A1B0GV90 55 aa6.6□□□□□ -1.35
SF3B3-201ENST00000302516 LRRK1Q38SD2 2015 aa6.6□□□□□ -1.35
SF3B3-201ENST00000302516 ABHD3Q8WU67 409 aa6.6□□□□□ -1.35
SF3B3-201ENST00000302516 DNAJC4Q9NNZ3 241 aa6.6□□□□□ -1.35
SF3B3-201ENST00000302516 MAGEA5P43359 124 aa6.6□□□□□ -1.35
SF3B3-201ENST00000302516 RND3P61587 244 aa6.6□□□□□ -1.35
SF3B3-201ENST00000302516 MDP1Q86V88 176 aa6.6□□□□□ -1.35
SF3B3-201ENST00000302516 TUBA4BQ9H853 241 aa6.6□□□□□ -1.35
SF3B3-201ENST00000302516 PHLDA3Q9Y5J5 127 aa6.6□□□□□ -1.35
SF3B3-201ENST00000302516 SAMD13Q5VXD3 122 aa6.59□□□□□ -1.35
SF3B3-201ENST00000302516 EBLN2Q6P2I7 272 aa6.59□□□□□ -1.35
SF3B3-201ENST00000302516 SHISA5Q8N114 240 aa6.59□□□□□ -1.35
SF3B3-201ENST00000302516 TINAGQ9UJW2 476 aa6.59□□□□□ -1.35
SF3B3-201ENST00000302516 RAXQ9Y2V3 346 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms