RNA–Protein interactions for RNA: ENST00000301280.9

CHAF1A-201, Transcript of chromatin assembly factor 1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAF1A, Length 3,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-201ENST00000301280 OR2V2Q96R30 315 aa13.1□□□□□ -0.31
CHAF1A-201ENST00000301280 TANC2Q9HCD6 1990 aa13.09□□□□□ -0.31
CHAF1A-201ENST00000301280 CYB5R3P00387 301 aaPredicted RBP13.09□□□□□ -0.31
CHAF1A-201ENST00000301280 UCP1P25874 307 aa13.09□□□□□ -0.31
CHAF1A-201ENST00000301280 DLX1P56177 255 aa13.09□□□□□ -0.31
CHAF1A-201ENST00000301280 RPS23P62266 143 aaKnown RBP13.09□□□□□ -0.31
CHAF1A-201ENST00000301280 WDR25Q64LD2 544 aaPredicted RBP13.09□□□□□ -0.31
CHAF1A-201ENST00000301280 RAB39BQ96DA2 213 aa13.09□□□□□ -0.31
CHAF1A-201ENST00000301280 MUCL1Q96DR8 90 aa13.09□□□□□ -0.31
CHAF1A-201ENST00000301280 TMEM30CPA0ZSE6 113 aa13.09□□□□□ -0.31
CHAF1A-201ENST00000301280 CYB5BO43169 146 aa13.09□□□□□ -0.31
CHAF1A-201ENST00000301280 SLC38A11Q08AI6 406 aa13.09□□□□□ -0.31
CHAF1A-201ENST00000301280 PRAMEF5Q5TYX0 476 aa13.09□□□□□ -0.31
CHAF1A-201ENST00000301280 S100A9P06702 114 aaKnown RBP13.08□□□□□ -0.31
CHAF1A-201ENST00000301280 GPR12P47775 334 aa13.08□□□□□ -0.31
CHAF1A-201ENST00000301280 DLK1P80370 383 aa13.08□□□□□ -0.31
CHAF1A-201ENST00000301280 IL24Q13007 206 aa13.08□□□□□ -0.31
CHAF1A-201ENST00000301280 PLA2G2CQ5R387 149 aa13.08□□□□□ -0.31
CHAF1A-201ENST00000301280 Q6P435 159 aa13.08□□□□□ -0.31
CHAF1A-201ENST00000301280 KDF1Q8NAX2 398 aaPredicted RBP13.08□□□□□ -0.31
CHAF1A-201ENST00000301280 SSMEM1Q8WWF3 244 aa13.08□□□□□ -0.31
CHAF1A-201ENST00000301280 TUBA4BQ9H853 241 aa13.08□□□□□ -0.31
CHAF1A-201ENST00000301280 CREBBPQ92793 2442 aa13.08□□□□□ -0.32
CHAF1A-201ENST00000301280 H1FOOQ8IZA3 346 aaPredicted RBP13.08□□□□□ -0.32
CHAF1A-201ENST00000301280 FAM185AQ8N0U4 392 aa13.08□□□□□ -0.32
CHAF1A-201ENST00000301280 ITLN1Q8WWA0 313 aa13.08□□□□□ -0.32
CHAF1A-201ENST00000301280 GINS3Q9BRX5 216 aa13.08□□□□□ -0.32
CHAF1A-201ENST00000301280 NIPSNAP3BQ9BS92 247 aa13.08□□□□□ -0.32
CHAF1A-201ENST00000301280 GGACTQ9BVM4 153 aa13.08□□□□□ -0.32
CHAF1A-201ENST00000301280 NMSQ5H8A3 153 aa13.08□□□□□ -0.32
CHAF1A-201ENST00000301280 Q6ZT83 130 aa13.08□□□□□ -0.32
CHAF1A-201ENST00000301280 ZNF709Q8N972 641 aa13.08□□□□□ -0.32
CHAF1A-201ENST00000301280 H1FXQ92522 213 aaKnown RBP13.08□□□□□ -0.32
CHAF1A-201ENST00000301280 FAM122AQ96E09 287 aa13.08□□□□□ -0.32
CHAF1A-201ENST00000301280 H0Y980 276 aa13.07□□□□□ -0.32
CHAF1A-201ENST00000301280 FGF7P21781 194 aa13.07□□□□□ -0.32
CHAF1A-201ENST00000301280 PAX9P55771 341 aa13.07□□□□□ -0.32
CHAF1A-201ENST00000301280 PYY3Q5JQD4 70 aa13.07□□□□□ -0.32
CHAF1A-201ENST00000301280 C9orf152Q5JTZ5 239 aa13.07□□□□□ -0.32
CHAF1A-201ENST00000301280 HIPK2Q9H2X6 1198 aa13.07□□□□□ -0.32
CHAF1A-201ENST00000301280 TRBV6-6A0A0A6YYG2 114 aa13.07□□□□□ -0.32
CHAF1A-201ENST00000301280 TGIF2-C20orf24A0A0A6YYL0 155 aa13.07□□□□□ -0.32
CHAF1A-201ENST00000301280 ACTL6BO94805 426 aa13.07□□□□□ -0.32
CHAF1A-201ENST00000301280 ZNF585BQ52M93 769 aa13.07□□□□□ -0.32
CHAF1A-201ENST00000301280 LYG1Q8N1E2 194 aa13.07□□□□□ -0.32
CHAF1A-201ENST00000301280 CCL13Q99616 98 aa13.07□□□□□ -0.32
CHAF1A-201ENST00000301280 ATP5SQ99766 215 aa13.07□□□□□ -0.32
CHAF1A-201ENST00000301280 RBKSQ9H477 322 aa13.07□□□□□ -0.32
CHAF1A-201ENST00000301280 NAV3Q8IVL0 2385 aa13.07□□□□□ -0.32
CHAF1A-201ENST00000301280 ARHGAP32A7KAX9 2087 aa13.07□□□□□ -0.32
CHAF1A-201ENST00000301280 AP4M1O00189 453 aa13.06□□□□□ -0.32
CHAF1A-201ENST00000301280 HSPB1P04792 205 aaKnown RBP13.06□□□□□ -0.32
CHAF1A-201ENST00000301280 PRDX2P32119 198 aa13.06□□□□□ -0.32
CHAF1A-201ENST00000301280 TLE4Q04727 773 aa13.06□□□□□ -0.32
CHAF1A-201ENST00000301280 TFF3Q07654 80 aa13.06□□□□□ -0.32
CHAF1A-201ENST00000301280 NCR3LG1Q68D85 454 aa13.06□□□□□ -0.32
CHAF1A-201ENST00000301280 ABHD12Q8N2K0 398 aa13.06□□□□□ -0.32
CHAF1A-201ENST00000301280 LIN7CQ9NUP9 197 aaKnown RBP13.06□□□□□ -0.32
CHAF1A-201ENST00000301280 EIF2S3P41091 472 aaKnown RBP13.06□□□□□ -0.32
CHAF1A-201ENST00000301280 FOXC1Q12948 553 aa13.06□□□□□ -0.32
CHAF1A-201ENST00000301280 WDR82Q6UXN9 313 aa13.06□□□□□ -0.32
CHAF1A-201ENST00000301280 HEPN1Q6WQI6 88 aa13.06□□□□□ -0.32
CHAF1A-201ENST00000301280 C22orf34Q6ZV56 151 aa13.06□□□□□ -0.32
CHAF1A-201ENST00000301280 SSX7Q7RTT5 188 aa13.06□□□□□ -0.32
CHAF1A-201ENST00000301280 OR8G5Q8NG78 346 aa13.06□□□□□ -0.32
CHAF1A-201ENST00000301280 OR4F5Q8NH21 305 aa13.06□□□□□ -0.32
CHAF1A-201ENST00000301280 SNIP1Q8TAD8 396 aaKnown RBP13.06□□□□□ -0.32
CHAF1A-201ENST00000301280 TMEM56Q96MV1 263 aa13.06□□□□□ -0.32
CHAF1A-201ENST00000301280 OR4F4Q96R69 305 aa13.06□□□□□ -0.32
CHAF1A-201ENST00000301280 TMEM56-RWDD3S4R434 201 aa13.06□□□□□ -0.32
CHAF1A-201ENST00000301280 TRAV38-1A0A0B4J264 116 aa13.06□□□□□ -0.32
CHAF1A-201ENST00000301280 ODAMA1E959 279 aa13.06□□□□□ -0.32
CHAF1A-201ENST00000301280 LINC00473A8K010 186 aa13.06□□□□□ -0.32
CHAF1A-201ENST00000301280 ID3Q02535 119 aa13.06□□□□□ -0.32
CHAF1A-201ENST00000301280 RTP5Q14D33 572 aa13.06□□□□□ -0.32
CHAF1A-201ENST00000301280 MSMPQ1L6U9 139 aa13.06□□□□□ -0.32
CHAF1A-201ENST00000301280 BHLHA15Q7RTS1 189 aaPredicted RBP13.06□□□□□ -0.32
CHAF1A-201ENST00000301280 CCL17Q92583 94 aa13.06□□□□□ -0.32
CHAF1A-201ENST00000301280 COQ2Q96H96 371 aa13.06□□□□□ -0.32
CHAF1A-201ENST00000301280 A0A1B0GW64 132 aa13.05□□□□□ -0.32
CHAF1A-201ENST00000301280 SPINT2O43291 252 aa13.05□□□□□ -0.32
CHAF1A-201ENST00000301280 CLDN14O95500 239 aa13.05□□□□□ -0.32
CHAF1A-201ENST00000301280 MAP1LC3B2A6NCE7 125 aa13.05□□□□□ -0.32
CHAF1A-201ENST00000301280 GYPAP02724 150 aa13.05□□□□□ -0.32
CHAF1A-201ENST00000301280 CXCL1P09341 107 aa13.05□□□□□ -0.32
CHAF1A-201ENST00000301280 PGA5P0DJD9 388 aa13.05□□□□□ -0.32
CHAF1A-201ENST00000301280 HBG1P69891 147 aa13.05□□□□□ -0.32
CHAF1A-201ENST00000301280 HBG2P69892 147 aa13.05□□□□□ -0.32
CHAF1A-201ENST00000301280 ZNF600Q6ZNG1 722 aa13.05□□□□□ -0.32
CHAF1A-201ENST00000301280 OR5D13Q8NGL4 314 aa13.05□□□□□ -0.32
CHAF1A-201ENST00000301280 MAP1LC3BQ9GZQ8 125 aa13.05□□□□□ -0.32
CHAF1A-201ENST00000301280 RIMS4Q9H426 269 aaPredicted RBP13.05□□□□□ -0.32
CHAF1A-201ENST00000301280 TRAV3A0A0B4J244 114 aa13.05□□□□□ -0.32
CHAF1A-201ENST00000301280 IGHV2OR16-5A0A0B4J2B6 119 aa13.05□□□□□ -0.32
CHAF1A-201ENST00000301280 K7N7A8 449 aa13.05□□□□□ -0.32
CHAF1A-201ENST00000301280 TMPRSS2O15393 492 aa13.05□□□□□ -0.32
CHAF1A-201ENST00000301280 GFI1BQ5VTD9 330 aa13.05□□□□□ -0.32
CHAF1A-201ENST00000301280 COMMD1Q8N668 190 aa13.05□□□□□ -0.32
CHAF1A-201ENST00000301280 MALSU1Q96EH3 234 aa13.05□□□□□ -0.32
CHAF1A-201ENST00000301280 IGHV1-18A0A0C4DH31 117 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms