RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 RHBDL1O75783 438 aa9.66□□□□□ -0.86
TRUB1-201ENST00000298746 VENTXO95231 258 aa9.66□□□□□ -0.86
TRUB1-201ENST00000298746 CHRNB4P30926 498 aa9.66□□□□□ -0.86
TRUB1-201ENST00000298746 CDKN1AP38936 164 aa9.66□□□□□ -0.86
TRUB1-201ENST00000298746 CCL7P80098 99 aa9.66□□□□□ -0.86
TRUB1-201ENST00000298746 MMDQ15546 238 aa9.66□□□□□ -0.86
TRUB1-201ENST00000298746 ABLIM2Q6H8Q1 611 aa9.66□□□□□ -0.86
TRUB1-201ENST00000298746 OR1L6Q8NGR2 347 aa9.66□□□□□ -0.86
TRUB1-201ENST00000298746 RFESDQ8TAC1 157 aa9.66□□□□□ -0.86
TRUB1-201ENST00000298746 IFI44Q8TCB0 444 aa9.66□□□□□ -0.86
TRUB1-201ENST00000298746 NPCDR1Q9BY65 106 aa9.66□□□□□ -0.86
TRUB1-201ENST00000298746 FAM90A10PA6NDY2 464 aa9.66□□□□□ -0.86
TRUB1-201ENST00000298746 FAM90A18PA6NE21 464 aa9.66□□□□□ -0.86
TRUB1-201ENST00000298746 FAM90A16PA6NEW6 464 aa9.66□□□□□ -0.86
TRUB1-201ENST00000298746 FAM90A20PA6NIJ5 464 aa9.66□□□□□ -0.86
TRUB1-201ENST00000298746 FAM90A8PA6NJQ4 464 aa9.66□□□□□ -0.86
TRUB1-201ENST00000298746 FAM90A7PA6NKC0 464 aa9.66□□□□□ -0.86
TRUB1-201ENST00000298746 FAM90A22PA8MWA6 464 aa9.66□□□□□ -0.86
TRUB1-201ENST00000298746 FAM90A12PA8MX19 464 aa9.66□□□□□ -0.86
TRUB1-201ENST00000298746 FAM90A5PA8MXJ8 464 aa9.66□□□□□ -0.86
TRUB1-201ENST00000298746 DEFB108AA8MXU0 73 aa9.66□□□□□ -0.86
TRUB1-201ENST00000298746 FAM90A23PA8MXZ1 464 aa9.66□□□□□ -0.86
TRUB1-201ENST00000298746 FAM90A15PP0C7V4 464 aa9.66□□□□□ -0.86
TRUB1-201ENST00000298746 FAM90A13PP0C7W8 464 aa9.66□□□□□ -0.86
TRUB1-201ENST00000298746 FAM90A14PP0C7W9 464 aa9.66□□□□□ -0.86
TRUB1-201ENST00000298746 FAM90A24PP0C7X0 464 aa9.66□□□□□ -0.86
TRUB1-201ENST00000298746 SOX8P57073 446 aa9.66□□□□□ -0.86
TRUB1-201ENST00000298746 GNG3P63215 75 aa9.66□□□□□ -0.86
TRUB1-201ENST00000298746 ETFRF1Q6IPR1 90 aa9.66□□□□□ -0.86
TRUB1-201ENST00000298746 C17orf82Q86X59 251 aaPredicted RBP9.66□□□□□ -0.86
TRUB1-201ENST00000298746 ZNF295-AS1Q8N0V1 137 aa9.66□□□□□ -0.86
TRUB1-201ENST00000298746 ATOH7Q8N100 152 aa9.66□□□□□ -0.86
TRUB1-201ENST00000298746 SSMEM1Q8WWF3 244 aa9.66□□□□□ -0.86
TRUB1-201ENST00000298746 APOBEC3DQ96AK3 386 aaPredicted RBP9.66□□□□□ -0.86
TRUB1-201ENST00000298746 SF3B5Q9BWJ5 86 aaKnown RBP9.66□□□□□ -0.86
TRUB1-201ENST00000298746 EYSQ5T1H1 3165 aa9.66□□□□□ -0.86
TRUB1-201ENST00000298746 PRRC2CQ9Y520 2896 aaKnown RBP9.65□□□□□ -0.86
TRUB1-201ENST00000298746 CFAP54Q96N23 3096 aa9.65□□□□□ -0.86
TRUB1-201ENST00000298746 PDE6DO43924 150 aa9.65□□□□□ -0.86
TRUB1-201ENST00000298746 RAMP3O60896 148 aa9.65□□□□□ -0.86
TRUB1-201ENST00000298746 GNB1P62873 340 aa9.65□□□□□ -0.86
TRUB1-201ENST00000298746 ATP6V1FQ16864 119 aa9.65□□□□□ -0.86
TRUB1-201ENST00000298746 CARFQ8N187 725 aa9.65□□□□□ -0.86
TRUB1-201ENST00000298746 CCDC74BQ96LY2 380 aa9.65□□□□□ -0.86
TRUB1-201ENST00000298746 UHRF2Q96PU4 802 aa9.65□□□□□ -0.86
TRUB1-201ENST00000298746 OCIAD1Q9NX40 245 aa9.65□□□□□ -0.86
TRUB1-201ENST00000298746 PPP1R14DQ9NXH3 145 aa9.65□□□□□ -0.86
TRUB1-201ENST00000298746 IGHV3-43A0A0B4J1X8 118 aa9.65□□□□□ -0.86
TRUB1-201ENST00000298746 IGHV3-43DP0DP04 118 aa9.65□□□□□ -0.86
TRUB1-201ENST00000298746 GABRA2P47869 451 aa9.65□□□□□ -0.86
TRUB1-201ENST00000298746 PAFAH1B2P68402 229 aa9.65□□□□□ -0.86
TRUB1-201ENST00000298746 WDR74Q6RFH5 385 aaPredicted RBP9.65□□□□□ -0.86
TRUB1-201ENST00000298746 PXMP4Q9Y6I8 212 aa9.65□□□□□ -0.86
TRUB1-201ENST00000298746 IGLV3-12A0A075B6K2 115 aa9.65□□□□□ -0.87
TRUB1-201ENST00000298746 TRAV24A0A0B4J272 114 aa9.65□□□□□ -0.87
TRUB1-201ENST00000298746 Q6ZWC4 215 aa9.65□□□□□ -0.87
TRUB1-201ENST00000298746 ZNF114Q8NC26 417 aa9.65□□□□□ -0.87
TRUB1-201ENST00000298746 ZNF784Q8NCA9 323 aaPredicted RBP9.65□□□□□ -0.87
TRUB1-201ENST00000298746 ABCA1O95477 2261 aa9.65□□□□□ -0.87
TRUB1-201ENST00000298746 ODAMA1E959 279 aa9.64□□□□□ -0.87
TRUB1-201ENST00000298746 TNFSF13O75888 250 aa9.64□□□□□ -0.87
TRUB1-201ENST00000298746 S1PR2O95136 353 aa9.64□□□□□ -0.87
TRUB1-201ENST00000298746 PDLIM4P50479 330 aa9.64□□□□□ -0.87
TRUB1-201ENST00000298746 TRA2AQ13595 282 aaKnown RBP eCLIP9.64□□□□□ -0.87
TRUB1-201ENST00000298746 SPATA45Q537H7 98 aa9.64□□□□□ -0.87
TRUB1-201ENST00000298746 FOXL2NBQ6ZUU3 175 aa9.64□□□□□ -0.87
TRUB1-201ENST00000298746 CXorf67Q86X51 503 aaPredicted RBP9.64□□□□□ -0.87
TRUB1-201ENST00000298746 OR1L1Q8NH94 360 aa9.64□□□□□ -0.87
TRUB1-201ENST00000298746 WIPI2Q9Y4P8 454 aa9.64□□□□□ -0.87
TRUB1-201ENST00000298746 PRR14LQ5THK1 2151 aa9.64□□□□□ -0.87
TRUB1-201ENST00000298746 ZNF318Q5VUA4 2279 aa9.64□□□□□ -0.87
TRUB1-201ENST00000298746 A0A0G2JMM0 328 aa9.64□□□□□ -0.87
TRUB1-201ENST00000298746 SCO2A0A1W2PP80 73 aa9.64□□□□□ -0.87
TRUB1-201ENST00000298746 A0A1W2PPB8 328 aa9.64□□□□□ -0.87
TRUB1-201ENST00000298746 A0A1W2PRS3 328 aa9.64□□□□□ -0.87
TRUB1-201ENST00000298746 KIR3DP1A8MWS1 328 aa9.64□□□□□ -0.87
TRUB1-201ENST00000298746 ZNF253O75346 499 aa9.64□□□□□ -0.87
TRUB1-201ENST00000298746 ACTL6BO94805 426 aa9.64□□□□□ -0.87
TRUB1-201ENST00000298746 ARL14EPLP0DKL9 152 aa9.64□□□□□ -0.87
TRUB1-201ENST00000298746 MGST1P10620 155 aaKnown RBP9.64□□□□□ -0.87
TRUB1-201ENST00000298746 BRS3P32247 399 aa9.64□□□□□ -0.87
TRUB1-201ENST00000298746 HINT1P49773 126 aaPredicted RBP9.64□□□□□ -0.87
TRUB1-201ENST00000298746 ZNF585BQ52M93 769 aa9.64□□□□□ -0.87
TRUB1-201ENST00000298746 FBXO46Q6PJ61 603 aaPredicted RBP9.64□□□□□ -0.87
TRUB1-201ENST00000298746 MED12LQ86YW9 2145 aa9.64□□□□□ -0.87
TRUB1-201ENST00000298746 OR5P3Q8WZ94 311 aa9.64□□□□□ -0.87
TRUB1-201ENST00000298746 BORCS7Q96B45 105 aa9.64□□□□□ -0.87
TRUB1-201ENST00000298746 WNT10AQ9GZT5 417 aa9.64□□□□□ -0.87
TRUB1-201ENST00000298746 KIR2DL5BA0A0G2JN68 375 aa9.63□□□□□ -0.87
TRUB1-201ENST00000298746 KIR2DL5BA0A0G2JPC4 375 aa9.63□□□□□ -0.87
TRUB1-201ENST00000298746 IGHV3-13P01766 116 aa9.63□□□□□ -0.87
TRUB1-201ENST00000298746 IGHV3-7P01780 117 aa9.63□□□□□ -0.87
TRUB1-201ENST00000298746 RFPL3SP0C7P2 107 aa9.63□□□□□ -0.87
TRUB1-201ENST00000298746 PAX1P15863 534 aa9.63□□□□□ -0.87
TRUB1-201ENST00000298746 ALKBH2Q6NS38 261 aa9.63□□□□□ -0.87
TRUB1-201ENST00000298746 OR8I2Q8N0Y5 310 aa9.63□□□□□ -0.87
TRUB1-201ENST00000298746 KIR2DL5AQ8N109 375 aa9.63□□□□□ -0.87
TRUB1-201ENST00000298746 C12orf49Q9H741 205 aa9.63□□□□□ -0.87
TRUB1-201ENST00000298746 TIMM8BQ9Y5J9 83 aaPredicted RBP9.63□□□□□ -0.87
TRUB1-201ENST00000298746 LRP4O75096 1905 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms