RNA–Protein interactions for RNA: ENST00000298454.3

VSTM4-201, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VSTM4, Length 2,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-201ENST00000298454 TMEM200BQ69YZ2 307 aa18.74■□□□□ 0.59
VSTM4-201ENST00000298454 TAS2R3Q9NYW6 316 aa18.74■□□□□ 0.59
VSTM4-201ENST00000298454 RPUSD1Q9UJJ7 312 aaKnown RBP18.74■□□□□ 0.59
VSTM4-201ENST00000298454 HCFC1P51610 2035 aa18.73■□□□□ 0.59
VSTM4-201ENST00000298454 EIF5AL1Q6IS14 154 aaKnown RBP18.73■□□□□ 0.59
VSTM4-201ENST00000298454 TMEM217Q8N7C4 229 aa18.73■□□□□ 0.59
VSTM4-201ENST00000298454 RAB40CQ96S21 281 aa18.73■□□□□ 0.59
VSTM4-201ENST00000298454 ARV1Q9H2C2 271 aa18.73■□□□□ 0.59
VSTM4-201ENST00000298454 COA4Q9NYJ1 87 aa18.73■□□□□ 0.59
VSTM4-201ENST00000298454 SAA2-SAA4A0A096LPE2 208 aa18.72■□□□□ 0.59
VSTM4-201ENST00000298454 BORCS7-ASMTA0A0B4J1R7 106 aa18.72■□□□□ 0.59
VSTM4-201ENST00000298454 TOR1AO14656 332 aa18.72■□□□□ 0.59
VSTM4-201ENST00000298454 SAA2P0DJI9 122 aaPredicted RBP18.72■□□□□ 0.59
VSTM4-201ENST00000298454 MIDNQ504T8 468 aa18.72■□□□□ 0.59
VSTM4-201ENST00000298454 LYG1Q8N1E2 194 aa18.72■□□□□ 0.59
VSTM4-201ENST00000298454 OR1S2Q8NGQ3 325 aa18.72■□□□□ 0.59
VSTM4-201ENST00000298454 LRRC20Q8TCA0 184 aa18.72■□□□□ 0.59
VSTM4-201ENST00000298454 ITLN2Q8WWU7 325 aaPredicted RBP18.72■□□□□ 0.59
VSTM4-201ENST00000298454 KAAG1Q9UBP8 84 aa18.72■□□□□ 0.59
VSTM4-201ENST00000298454 HIVEP3Q5T1R4 2406 aa18.72■□□□□ 0.59
VSTM4-201ENST00000298454 ATG12O94817 140 aa18.72■□□□□ 0.59
VSTM4-201ENST00000298454 OR5C1Q8NGR4 320 aa18.72■□□□□ 0.59
VSTM4-201ENST00000298454 CD300LFQ8TDQ1 290 aa18.72■□□□□ 0.59
VSTM4-201ENST00000298454 ZNF714Q96N38 554 aa18.72■□□□□ 0.59
VSTM4-201ENST00000298454 GAL3ST2Q9H3Q3 398 aa18.72■□□□□ 0.59
VSTM4-201ENST00000298454 ZNRD1Q9P1U0 126 aa18.72■□□□□ 0.59
VSTM4-201ENST00000298454 GAB2Q9UQC2 676 aa18.72■□□□□ 0.59
VSTM4-201ENST00000298454 LRBAP50851 2863 aa18.72■□□□□ 0.59
VSTM4-201ENST00000298454 MARCH11A6NNE9 402 aa18.71■□□□□ 0.59
VSTM4-201ENST00000298454 ZNF705EA8MWA4 302 aaPredicted RBP18.71■□□□□ 0.59
VSTM4-201ENST00000298454 PPOXP50336 477 aa18.71■□□□□ 0.59
VSTM4-201ENST00000298454 DYNLT3P51808 116 aa18.71■□□□□ 0.59
VSTM4-201ENST00000298454 RPL23AP62750 156 aaKnown RBP18.71■□□□□ 0.59
VSTM4-201ENST00000298454 ZNF251Q9BRH9 671 aa18.71■□□□□ 0.59
VSTM4-201ENST00000298454 LAMP3Q9UQV4 416 aa18.71■□□□□ 0.59
VSTM4-201ENST00000298454 WSB1Q9Y6I7 421 aa18.71■□□□□ 0.59
VSTM4-201ENST00000298454 RAB29O14966 203 aa18.71■□□□□ 0.59
VSTM4-201ENST00000298454 TXNL1O43396 289 aa18.71■□□□□ 0.59
VSTM4-201ENST00000298454 FGF2P09038 288 aa18.71■□□□□ 0.59
VSTM4-201ENST00000298454 H2BFWTQ7Z2G1 175 aa18.71■□□□□ 0.59
VSTM4-201ENST00000298454 GINS3Q9BRX5 216 aa18.71■□□□□ 0.59
VSTM4-201ENST00000298454 LPAR3Q9UBY5 353 aa18.71■□□□□ 0.59
VSTM4-201ENST00000298454 TMEM267Q0VDI3 215 aaPredicted RBP18.7■□□□□ 0.58
VSTM4-201ENST00000298454 HSD17B13Q7Z5P4 300 aaPredicted RBP18.7■□□□□ 0.58
VSTM4-201ENST00000298454 HSD17B11Q8NBQ5 300 aa18.7■□□□□ 0.58
VSTM4-201ENST00000298454 R3HDM4Q96D70 268 aa18.7■□□□□ 0.58
VSTM4-201ENST00000298454 SH3BGRL3Q9H299 93 aa18.7■□□□□ 0.58
VSTM4-201ENST00000298454 ABCA4P78363 2273 aa18.7■□□□□ 0.58
VSTM4-201ENST00000298454 UBE2KP61086 200 aa18.69■□□□□ 0.58
VSTM4-201ENST00000298454 MRPS11P82912 194 aaKnown RBP18.69■□□□□ 0.58
VSTM4-201ENST00000298454 TNFRSF9Q07011 255 aa18.69■□□□□ 0.58
VSTM4-201ENST00000298454 BAXQ07812 192 aa18.69■□□□□ 0.58
VSTM4-201ENST00000298454 TMEM30BQ3MIR4 351 aa18.69■□□□□ 0.58
VSTM4-201ENST00000298454 DDB2Q92466 427 aa18.69■□□□□ 0.58
VSTM4-201ENST00000298454 S1PR3Q99500 378 aa18.69■□□□□ 0.58
VSTM4-201ENST00000298454 PSENENQ9NZ42 101 aa18.69■□□□□ 0.58
VSTM4-201ENST00000298454 NDUFA2O43678 99 aa18.69■□□□□ 0.58
VSTM4-201ENST00000298454 LY6HO94772 140 aa18.69■□□□□ 0.58
VSTM4-201ENST00000298454 HPRT1P00492 218 aa18.69■□□□□ 0.58
VSTM4-201ENST00000298454 SULT1A2P50226 295 aa18.69■□□□□ 0.58
VSTM4-201ENST00000298454 SLC25A48Q6ZT89 311 aaKnown RBP18.69■□□□□ 0.58
VSTM4-201ENST00000298454 CTNNBIP1Q9NSA3 81 aaPredicted RBP18.69■□□□□ 0.58
VSTM4-201ENST00000298454 HSPB7Q9UBY9 170 aa18.69■□□□□ 0.58
VSTM4-201ENST00000298454 A8MXK9 166 aa18.68■□□□□ 0.58
VSTM4-201ENST00000298454 FAM90A26D6RGX4 464 aa18.68■□□□□ 0.58
VSTM4-201ENST00000298454 SOD3P08294 240 aa18.68■□□□□ 0.58
VSTM4-201ENST00000298454 HEPN1Q6WQI6 88 aa18.68■□□□□ 0.58
VSTM4-201ENST00000298454 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.68■□□□□ 0.58
VSTM4-201ENST00000298454 MARVELD3Q96A59 401 aa18.68■□□□□ 0.58
VSTM4-201ENST00000298454 RBMXL1Q96E39 390 aaKnown RBP18.68■□□□□ 0.58
VSTM4-201ENST00000298454 RBKSQ9H477 322 aa18.68■□□□□ 0.58
VSTM4-201ENST00000298454 CBLN4Q9NTU7 201 aa18.68■□□□□ 0.58
VSTM4-201ENST00000298454 PRELID3BQ9Y3B1 194 aa18.68■□□□□ 0.58
VSTM4-201ENST00000298454 YLPM1P49750 1951 aaKnown RBP18.68■□□□□ 0.58
VSTM4-201ENST00000298454 MED6O75586 246 aa18.68■□□□□ 0.58
VSTM4-201ENST00000298454 PLA2G5P39877 138 aa18.68■□□□□ 0.58
VSTM4-201ENST00000298454 SSX9Q7RTT3 188 aa18.68■□□□□ 0.58
VSTM4-201ENST00000298454 VKORC1L1Q8N0U8 176 aa18.68■□□□□ 0.58
VSTM4-201ENST00000298454 EIF4E3Q8N5X7 224 aaKnown RBP18.68■□□□□ 0.58
VSTM4-201ENST00000298454 SPP1P10451 314 aa18.67■□□□□ 0.58
VSTM4-201ENST00000298454 DAOP14920 347 aa18.67■□□□□ 0.58
VSTM4-201ENST00000298454 ZNF266Q14584 549 aa18.67■□□□□ 0.58
VSTM4-201ENST00000298454 STX12Q86Y82 276 aa18.67■□□□□ 0.58
VSTM4-201ENST00000298454 OR10A7Q8NGE5 316 aa18.67■□□□□ 0.58
VSTM4-201ENST00000298454 SMIM8Q96KF7 97 aa18.67■□□□□ 0.58
VSTM4-201ENST00000298454 SESN1Q9Y6P5 492 aa18.67■□□□□ 0.58
VSTM4-201ENST00000298454 HRNRQ86YZ3 2850 aaPredicted RBP18.67■□□□□ 0.58
VSTM4-201ENST00000298454 A0A1W2PPR1 153 aa18.66■□□□□ 0.58
VSTM4-201ENST00000298454 SEC11BP0C7V7 166 aa18.66■□□□□ 0.58
VSTM4-201ENST00000298454 SULT1A1P50225 295 aa18.66■□□□□ 0.58
VSTM4-201ENST00000298454 C11orf71Q6IPW1 123 aa18.66■□□□□ 0.58
VSTM4-201ENST00000298454 LINC00052Q96N35 136 aa18.66■□□□□ 0.58
VSTM4-201ENST00000298454 RBFOX2O43251 390 aaKnown RBP eCLIP18.66■□□□□ 0.58
VSTM4-201ENST00000298454 RBMXL2O75526 392 aaKnown RBP18.66■□□□□ 0.58
VSTM4-201ENST00000298454 OR9G9P0C7N8 305 aa18.66■□□□□ 0.58
VSTM4-201ENST00000298454 METTL15P1P0C7V9 234 aa18.66■□□□□ 0.58
VSTM4-201ENST00000298454 AVPI1Q5T686 147 aa18.66■□□□□ 0.58
VSTM4-201ENST00000298454 ZNF383Q8NA42 475 aa18.66■□□□□ 0.58
VSTM4-201ENST00000298454 RAB1BQ9H0U4 201 aa18.66■□□□□ 0.58
VSTM4-201ENST00000298454 RFNGQ9Y644 331 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms