RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 DCAF12Q5T6F0 453 aa12.64□□□□□ -0.39
SPIDR-201ENST00000297423 TMEM211Q6ICI0 200 aa12.64□□□□□ -0.39
SPIDR-201ENST00000297423 SSMEM1Q8WWF3 244 aa12.64□□□□□ -0.39
SPIDR-201ENST00000297423 SIGLEC12Q96PQ1 595 aa12.64□□□□□ -0.39
SPIDR-201ENST00000297423 TMEM242Q9NWH2 141 aa12.64□□□□□ -0.39
SPIDR-201ENST00000297423 VPS13AQ96RL7 3174 aa12.64□□□□□ -0.39
SPIDR-201ENST00000297423 A0A0U1RQV5 110 aa12.64□□□□□ -0.39
SPIDR-201ENST00000297423 F2Z2F3 143 aa12.64□□□□□ -0.39
SPIDR-201ENST00000297423 IGKV1D-33P01593 117 aa12.64□□□□□ -0.39
SPIDR-201ENST00000297423 IGKV1-33P01594 117 aa12.64□□□□□ -0.39
SPIDR-201ENST00000297423 RANP62826 216 aaKnown RBP12.64□□□□□ -0.39
SPIDR-201ENST00000297423 Q56UQ5 140 aa12.64□□□□□ -0.39
SPIDR-201ENST00000297423 PARD6GQ9BYG4 376 aaPredicted RBP12.64□□□□□ -0.39
SPIDR-201ENST00000297423 CTXND1A0A1B0GTU2 59 aa12.64□□□□□ -0.39
SPIDR-201ENST00000297423 CA6P23280 308 aa12.64□□□□□ -0.39
SPIDR-201ENST00000297423 TMEM164Q5U3C3 297 aa12.64□□□□□ -0.39
SPIDR-201ENST00000297423 LOXL4Q96JB6 756 aa12.64□□□□□ -0.39
SPIDR-201ENST00000297423 AQP7P3A6NL99 342 aa12.63□□□□□ -0.39
SPIDR-201ENST00000297423 SH2D1BO14796 132 aa12.63□□□□□ -0.39
SPIDR-201ENST00000297423 CXCL13O43927 109 aa12.63□□□□□ -0.39
SPIDR-201ENST00000297423 SERF2P84101 59 aa12.63□□□□□ -0.39
SPIDR-201ENST00000297423 FXYD3Q14802 87 aa12.63□□□□□ -0.39
SPIDR-201ENST00000297423 OR8I2Q8N0Y5 310 aa12.63□□□□□ -0.39
SPIDR-201ENST00000297423 WDYHV1Q96HA8 205 aa12.63□□□□□ -0.39
SPIDR-201ENST00000297423 CELSR3Q9NYQ7 3312 aa12.63□□□□□ -0.39
SPIDR-201ENST00000297423 DEFB108AA8MXU0 73 aa12.63□□□□□ -0.39
SPIDR-201ENST00000297423 ZIC3O60481 467 aa12.63□□□□□ -0.39
SPIDR-201ENST00000297423 ACTL10Q5JWF8 245 aa12.63□□□□□ -0.39
SPIDR-201ENST00000297423 Q6ZWC4 215 aa12.63□□□□□ -0.39
SPIDR-201ENST00000297423 TGIF2LYQ8IUE0 185 aa12.63□□□□□ -0.39
SPIDR-201ENST00000297423 WIPI2Q9Y4P8 454 aa12.63□□□□□ -0.39
SPIDR-201ENST00000297423 ACACAQ13085 2346 aa12.63□□□□□ -0.39
SPIDR-201ENST00000297423 ABCA4P78363 2273 aa12.63□□□□□ -0.39
SPIDR-201ENST00000297423 GDF9O60383 454 aa12.63□□□□□ -0.39
SPIDR-201ENST00000297423 IGHEP01854 428 aa12.63□□□□□ -0.39
SPIDR-201ENST00000297423 CEACAM6P40199 344 aa12.63□□□□□ -0.39
SPIDR-201ENST00000297423 RFESDQ8TAC1 157 aa12.63□□□□□ -0.39
SPIDR-201ENST00000297423 ZDHHC16Q969W1 377 aa12.63□□□□□ -0.39
SPIDR-201ENST00000297423 ARL2-SNX15V9GYD0 113 aa12.63□□□□□ -0.39
SPIDR-201ENST00000297423 DEGS1O15121 323 aa12.62□□□□□ -0.39
SPIDR-201ENST00000297423 SYNGR1O43759 233 aa12.62□□□□□ -0.39
SPIDR-201ENST00000297423 MSX1P28360 303 aa12.62□□□□□ -0.39
SPIDR-201ENST00000297423 FOLR3P41439 243 aa12.62□□□□□ -0.39
SPIDR-201ENST00000297423 HLA-DRB5Q30154 266 aa12.62□□□□□ -0.39
SPIDR-201ENST00000297423 ARL6IP6Q8N6S5 226 aa12.62□□□□□ -0.39
SPIDR-201ENST00000297423 NINJ1Q92982 152 aa12.62□□□□□ -0.39
SPIDR-201ENST00000297423 UHRF2Q96PU4 802 aa12.62□□□□□ -0.39
SPIDR-201ENST00000297423 LNP1A1A4G5 178 aa12.62□□□□□ -0.39
SPIDR-201ENST00000297423 UCP1P25874 307 aa12.62□□□□□ -0.39
SPIDR-201ENST00000297423 TCTAP57738 103 aa12.62□□□□□ -0.39
SPIDR-201ENST00000297423 DNLZQ5SXM8 178 aa12.62□□□□□ -0.39
SPIDR-201ENST00000297423 LOXL2Q9Y4K0 774 aa12.62□□□□□ -0.39
SPIDR-201ENST00000297423 TMEM210A6NLX4 147 aa12.62□□□□□ -0.39
SPIDR-201ENST00000297423 RAC2P15153 192 aa12.62□□□□□ -0.39
SPIDR-201ENST00000297423 PRDX4Q13162 271 aa12.62□□□□□ -0.39
SPIDR-201ENST00000297423 LRRC75BQ2VPJ9 315 aa12.62□□□□□ -0.39
SPIDR-201ENST00000297423 NMSQ5H8A3 153 aa12.62□□□□□ -0.39
SPIDR-201ENST00000297423 TMEM56Q96MV1 263 aa12.62□□□□□ -0.39
SPIDR-201ENST00000297423 HEYLQ9NQ87 328 aaPredicted RBP12.62□□□□□ -0.39
SPIDR-201ENST00000297423 TBL2Q9Y4P3 447 aaKnown RBP12.62□□□□□ -0.39
SPIDR-201ENST00000297423 TMEM56-RWDD3S4R434 201 aa12.62□□□□□ -0.39
SPIDR-201ENST00000297423 CEACAM8P31997 349 aaPredicted RBP12.62□□□□□ -0.39
SPIDR-201ENST00000297423 HES3Q5TGS1 186 aa12.62□□□□□ -0.39
SPIDR-201ENST00000297423 LCN12Q6JVE5 192 aa12.62□□□□□ -0.39
SPIDR-201ENST00000297423 STPG4Q8N801 248 aa12.62□□□□□ -0.39
SPIDR-201ENST00000297423 FREM1Q5H8C1 2179 aa12.61□□□□□ -0.39
SPIDR-201ENST00000297423 IGHV3-43A0A0B4J1X8 118 aa12.61□□□□□ -0.39
SPIDR-201ENST00000297423 TNFSF13O75888 250 aa12.61□□□□□ -0.39
SPIDR-201ENST00000297423 IGHV3-43DP0DP04 118 aa12.61□□□□□ -0.39
SPIDR-201ENST00000297423 SRP14P37108 136 aaKnown RBP12.61□□□□□ -0.39
SPIDR-201ENST00000297423 OIT3Q8WWZ8 545 aa12.61□□□□□ -0.39
SPIDR-201ENST00000297423 ALKBH7Q9BT30 221 aaPredicted RBP12.61□□□□□ -0.39
SPIDR-201ENST00000297423 BET1LQ9NYM9 111 aa12.61□□□□□ -0.39
SPIDR-201ENST00000297423 OR2W1Q9Y3N9 320 aa12.61□□□□□ -0.39
SPIDR-201ENST00000297423 IGLV3-12A0A075B6K2 115 aa12.61□□□□□ -0.39
SPIDR-201ENST00000297423 ZG16O60844 167 aa12.61□□□□□ -0.39
SPIDR-201ENST00000297423 MRPS11P82912 194 aaKnown RBP12.61□□□□□ -0.39
SPIDR-201ENST00000297423 PLEKHA3Q9HB20 300 aa12.61□□□□□ -0.39
SPIDR-201ENST00000297423 M0QZ24 198 aa12.61□□□□□ -0.39
SPIDR-201ENST00000297423 NTN3O00634 580 aaPredicted RBP12.61□□□□□ -0.39
SPIDR-201ENST00000297423 LINC00614P0C842 121 aa12.61□□□□□ -0.39
SPIDR-201ENST00000297423 ZNF883P0CG24 379 aa12.61□□□□□ -0.39
SPIDR-201ENST00000297423 ZNF114Q8NC26 417 aa12.61□□□□□ -0.39
SPIDR-201ENST00000297423 AKIRIN1Q9H9L7 192 aaPredicted RBP12.61□□□□□ -0.39
SPIDR-201ENST00000297423 H0Y980 276 aa12.6□□□□□ -0.39
SPIDR-201ENST00000297423 UMODP07911 640 aa12.6□□□□□ -0.39
SPIDR-201ENST00000297423 CCL1P22362 96 aa12.6□□□□□ -0.39
SPIDR-201ENST00000297423 H2BFWTQ7Z2G1 175 aa12.6□□□□□ -0.39
SPIDR-201ENST00000297423 SFRP2Q96HF1 295 aa12.6□□□□□ -0.39
SPIDR-201ENST00000297423 FOXB1Q99853 325 aa12.6□□□□□ -0.39
SPIDR-201ENST00000297423 LAMTOR2Q9Y2Q5 125 aa12.6□□□□□ -0.39
SPIDR-201ENST00000297423 ADAMTS9Q9P2N4 1935 aa12.6□□□□□ -0.39
SPIDR-201ENST00000297423 C17orf112F2Z3M2 114 aa12.6□□□□□ -0.39
SPIDR-201ENST00000297423 RPL19P84098 196 aaKnown RBP12.6□□□□□ -0.39
SPIDR-201ENST00000297423 PSG4Q00888 419 aa12.6□□□□□ -0.39
SPIDR-201ENST00000297423 ASPHD1Q5U4P2 390 aa12.6□□□□□ -0.39
SPIDR-201ENST00000297423 FGFRL1Q8N441 504 aa12.6□□□□□ -0.39
SPIDR-201ENST00000297423 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.6□□□□□ -0.399e-7■■■■■ 29.4
SPIDR-201ENST00000297423 RAB29O14966 203 aa12.6□□□□□ -0.39
SPIDR-201ENST00000297423 HSBP1O75506 76 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms