RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 CST9LP1Q5W188 147 aa7.78□□□□□ -1.16
PRDM9-201ENST00000296682 ZNF787Q6DD87 383 aa7.78□□□□□ -1.16
PRDM9-201ENST00000296682 OR10P1Q8NGE3 313 aa7.78□□□□□ -1.16
PRDM9-201ENST00000296682 RBKSQ9H477 322 aa7.78□□□□□ -1.16
PRDM9-201ENST00000296682 PARP11Q9NR21 331 aa7.78□□□□□ -1.16
PRDM9-201ENST00000296682 SLC25A15Q9Y619 301 aa7.78□□□□□ -1.16
PRDM9-201ENST00000296682 TMEM210A6NLX4 147 aa7.77□□□□□ -1.16
PRDM9-201ENST00000296682 GAPDHP04406 335 aaKnown RBP7.77□□□□□ -1.16
PRDM9-201ENST00000296682 OR4A8P0C604 315 aa7.77□□□□□ -1.16
PRDM9-201ENST00000296682 HOXA1P49639 335 aaPredicted RBP7.77□□□□□ -1.16
PRDM9-201ENST00000296682 ARL16Q0P5N6 197 aa7.77□□□□□ -1.16
PRDM9-201ENST00000296682 NMSQ5H8A3 153 aa7.77□□□□□ -1.16
PRDM9-201ENST00000296682 UTF1Q5T230 341 aa7.77□□□□□ -1.16
PRDM9-201ENST00000296682 TMEM108Q6UXF1 575 aa7.77□□□□□ -1.16
PRDM9-201ENST00000296682 MOB1BQ7L9L4 216 aa7.77□□□□□ -1.16
PRDM9-201ENST00000296682 LINC01560Q8TB33 94 aa7.77□□□□□ -1.16
PRDM9-201ENST00000296682 NEUROG1Q92886 237 aa7.77□□□□□ -1.16
PRDM9-201ENST00000296682 R3HDM4Q96D70 268 aa7.77□□□□□ -1.16
PRDM9-201ENST00000296682 TMPRSS5Q9H3S3 457 aa7.77□□□□□ -1.16
PRDM9-201ENST00000296682 ENY2Q9NPA8 101 aa7.77□□□□□ -1.16
PRDM9-201ENST00000296682 RPRMQ9NS64 109 aa7.77□□□□□ -1.16
PRDM9-201ENST00000296682 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.77□□□□□ -1.16
PRDM9-201ENST00000296682 STRAPQ9Y3F4 350 aaKnown RBP7.77□□□□□ -1.16
PRDM9-201ENST00000296682 A0A1W2PPH5 198 aa7.77□□□□□ -1.17
PRDM9-201ENST00000296682 A0A1W2PRD5 423 aa7.77□□□□□ -1.17
PRDM9-201ENST00000296682 A0A1W2PRF3 423 aa7.77□□□□□ -1.17
PRDM9-201ENST00000296682 A0A1W2PRM7 423 aa7.77□□□□□ -1.17
PRDM9-201ENST00000296682 DFFBO76075 338 aa7.77□□□□□ -1.17
PRDM9-201ENST00000296682 MDKP21741 143 aaPredicted RBP7.77□□□□□ -1.17
PRDM9-201ENST00000296682 FGF7P21781 194 aa7.77□□□□□ -1.17
PRDM9-201ENST00000296682 SULT1A1P50225 295 aa7.77□□□□□ -1.17
PRDM9-201ENST00000296682 ID3Q02535 119 aa7.77□□□□□ -1.17
PRDM9-201ENST00000296682 ZNF146Q15072 292 aa7.77□□□□□ -1.17
PRDM9-201ENST00000296682 ZNF585BQ52M93 769 aa7.77□□□□□ -1.17
PRDM9-201ENST00000296682 C11orf53Q8IXP5 236 aa7.77□□□□□ -1.17
PRDM9-201ENST00000296682 ABHD12Q8N2K0 398 aa7.77□□□□□ -1.17
PRDM9-201ENST00000296682 GCSAMQ8N6F7 178 aa7.77□□□□□ -1.17
PRDM9-201ENST00000296682 DTD1Q8TEA8 209 aa7.77□□□□□ -1.17
PRDM9-201ENST00000296682 SMIM8Q96KF7 97 aa7.77□□□□□ -1.17
PRDM9-201ENST00000296682 MEGF10Q96KG7 1140 aa7.77□□□□□ -1.17
PRDM9-201ENST00000296682 RAB40CQ96S21 281 aa7.77□□□□□ -1.17
PRDM9-201ENST00000296682 IGHV3-72A0A0B4J1Y9 119 aa7.77□□□□□ -1.17
PRDM9-201ENST00000296682 A0A1B0GU03 582 aa7.77□□□□□ -1.17
PRDM9-201ENST00000296682 RBFOX3A6NFN3 312 aa7.77□□□□□ -1.17
PRDM9-201ENST00000296682 LINC00473A8K010 186 aa7.77□□□□□ -1.17
PRDM9-201ENST00000296682 TRIM77I1YAP6 450 aa7.77□□□□□ -1.17
PRDM9-201ENST00000296682 CRYBA1P05813 215 aa7.77□□□□□ -1.17
PRDM9-201ENST00000296682 MYOD1P15172 320 aa7.77□□□□□ -1.17
PRDM9-201ENST00000296682 ZNF880Q6PDB4 577 aa7.77□□□□□ -1.17
PRDM9-201ENST00000296682 LINC00596Q86U02 117 aa7.77□□□□□ -1.17
PRDM9-201ENST00000296682 CYB561D1Q8N8Q1 229 aa7.77□□□□□ -1.17
PRDM9-201ENST00000296682 GNPNAT1Q96EK6 184 aaPredicted RBP7.77□□□□□ -1.17
PRDM9-201ENST00000296682 ATP5SQ99766 215 aa7.77□□□□□ -1.17
PRDM9-201ENST00000296682 PATZ1Q9HBE1 687 aaKnown RBP7.77□□□□□ -1.17
PRDM9-201ENST00000296682 PRELID3BQ9Y3B1 194 aa7.77□□□□□ -1.17
PRDM9-201ENST00000296682 SPP1P10451 314 aa7.76□□□□□ -1.17
PRDM9-201ENST00000296682 CD40P25942 277 aa7.76□□□□□ -1.17
PRDM9-201ENST00000296682 SNCAP37840 140 aa7.76□□□□□ -1.17
PRDM9-201ENST00000296682 MZT1Q08AG7 82 aa7.76□□□□□ -1.17
PRDM9-201ENST00000296682 C4orf17Q53FE4 359 aa7.76□□□□□ -1.17
PRDM9-201ENST00000296682 BTNL8Q6UX41 500 aa7.76□□□□□ -1.17
PRDM9-201ENST00000296682 DOLPP1Q86YN1 238 aa7.76□□□□□ -1.17
PRDM9-201ENST00000296682 SPACA3Q8IXA5 215 aa7.76□□□□□ -1.17
PRDM9-201ENST00000296682 SSMEM1Q8WWF3 244 aa7.76□□□□□ -1.17
PRDM9-201ENST00000296682 CHD3Q12873 2000 aaKnown RBP7.76□□□□□ -1.17
PRDM9-201ENST00000296682 IGKV1D-17A0A075B6S4 117 aa7.76□□□□□ -1.17
PRDM9-201ENST00000296682 TRGV10A0A0A0MS01 117 aa7.76□□□□□ -1.17
PRDM9-201ENST00000296682 J3QW42 95 aa7.76□□□□□ -1.17
PRDM9-201ENST00000296682 ACAA1P09110 424 aaPredicted RBP7.76□□□□□ -1.17
PRDM9-201ENST00000296682 RND3P61587 244 aa7.76□□□□□ -1.17
PRDM9-201ENST00000296682 BSPH1Q075Z2 132 aa7.76□□□□□ -1.17
PRDM9-201ENST00000296682 GUSBP1Q15486 140 aa7.76□□□□□ -1.17
PRDM9-201ENST00000296682 PDZD11Q5EBL8 140 aa7.76□□□□□ -1.17
PRDM9-201ENST00000296682 TIMM23BQ5SRD1 257 aa7.76□□□□□ -1.17
PRDM9-201ENST00000296682 ZNF645Q8N7E2 425 aa7.76□□□□□ -1.17
PRDM9-201ENST00000296682 SEC11CQ9BY50 192 aa7.76□□□□□ -1.17
PRDM9-201ENST00000296682 RNF7Q9UBF6 113 aa7.76□□□□□ -1.17
PRDM9-201ENST00000296682 MARCH11A6NNE9 402 aa7.76□□□□□ -1.17
PRDM9-201ENST00000296682 FAM157AC9JC47 383 aa7.76□□□□□ -1.17
PRDM9-201ENST00000296682 SLC31A2O15432 143 aa7.76□□□□□ -1.17
PRDM9-201ENST00000296682 ACTL6BO94805 426 aa7.76□□□□□ -1.17
PRDM9-201ENST00000296682 PDLIM3Q53GG5 364 aaPredicted RBP7.76□□□□□ -1.17
PRDM9-201ENST00000296682 IGF2-ASQ6U949 168 aa7.76□□□□□ -1.17
PRDM9-201ENST00000296682 Q6ZS92 163 aa7.76□□□□□ -1.17
PRDM9-201ENST00000296682 QTRT1Q9BXR0 403 aaKnown RBP7.76□□□□□ -1.17
PRDM9-201ENST00000296682 SLC35B3Q9H1N7 401 aa7.76□□□□□ -1.17
PRDM9-201ENST00000296682 KPTNQ9Y664 436 aa7.76□□□□□ -1.17
PRDM9-201ENST00000296682 VSTM5A8MXK1 200 aa7.75□□□□□ -1.17
PRDM9-201ENST00000296682 CCL3L1P16619 93 aa7.75□□□□□ -1.17
PRDM9-201ENST00000296682 GLRXP35754 106 aa7.75□□□□□ -1.17
PRDM9-201ENST00000296682 ERVK11-1P61568 191 aa7.75□□□□□ -1.17
PRDM9-201ENST00000296682 MRPS11P82912 194 aaKnown RBP7.75□□□□□ -1.17
PRDM9-201ENST00000296682 ADIRFQ15847 76 aa7.75□□□□□ -1.17
PRDM9-201ENST00000296682 EDARADDQ8WWZ3 215 aa7.75□□□□□ -1.17
PRDM9-201ENST00000296682 SAP30LQ9HAJ7 183 aa7.75□□□□□ -1.17
PRDM9-201ENST00000296682 SMCO4Q9NRQ5 59 aa7.75□□□□□ -1.17
PRDM9-201ENST00000296682 TACC2O95359 2948 aa7.75□□□□□ -1.17
PRDM9-201ENST00000296682 KALRNO60229 2985 aa7.75□□□□□ -1.17
PRDM9-201ENST00000296682 A0A0G2JNJ9 132 aa7.75□□□□□ -1.17
PRDM9-201ENST00000296682 A0A1W2PPV4 95 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms