RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 YRDCQ86U90 279 aaKnown RBP10.1□□□□□ -0.79
SNIP1-201ENST00000296215 ZNF519Q8TB69 540 aa10.1□□□□□ -0.79
SNIP1-201ENST00000296215 VGLL1Q99990 258 aa10.1□□□□□ -0.79
SNIP1-201ENST00000296215 WFDC6Q9BQY6 131 aa10.1□□□□□ -0.79
SNIP1-201ENST00000296215 MRPL27Q9P0M9 148 aaKnown RBP10.1□□□□□ -0.79
SNIP1-201ENST00000296215 TRBV5-7A0A0A0MS05 114 aa10.1□□□□□ -0.79
SNIP1-201ENST00000296215 A0A0J9YW62 118 aa10.1□□□□□ -0.79
SNIP1-201ENST00000296215 LOC389332A0A1B0GUA5 103 aa10.1□□□□□ -0.79
SNIP1-201ENST00000296215 TMEM50AO95807 157 aa10.1□□□□□ -0.79
SNIP1-201ENST00000296215 EML2O95834 649 aa10.1□□□□□ -0.79
SNIP1-201ENST00000296215 ABCA7Q8IZY2 2146 aa10.1□□□□□ -0.79
SNIP1-201ENST00000296215 CICQ96RK0 1608 aaPredicted RBP10.1□□□□□ -0.79
SNIP1-201ENST00000296215 C22orf39Q6P5X5 142 aa10.1□□□□□ -0.79
SNIP1-201ENST00000296215 PTH2Q96A98 100 aa10.1□□□□□ -0.79
SNIP1-201ENST00000296215 GPR82Q96P67 336 aa10.1□□□□□ -0.79
SNIP1-201ENST00000296215 PRSS37A4D1T9 235 aa10.09□□□□□ -0.79
SNIP1-201ENST00000296215 CRYGCP07315 174 aa10.09□□□□□ -0.79
SNIP1-201ENST00000296215 HERVK_113P61574 105 aa10.09□□□□□ -0.79
SNIP1-201ENST00000296215 FADS6Q8N9I5 356 aa10.09□□□□□ -0.79
SNIP1-201ENST00000296215 ZC2HC1AQ96GY0 325 aa10.09□□□□□ -0.79
SNIP1-201ENST00000296215 KCNK17Q96T54 332 aa10.09□□□□□ -0.79
SNIP1-201ENST00000296215 SLC25A33Q9BSK2 321 aa10.09□□□□□ -0.79
SNIP1-201ENST00000296215 ERG28Q9UKR5 140 aa10.09□□□□□ -0.79
SNIP1-201ENST00000296215 TMEM150CB9EJG8 249 aa10.09□□□□□ -0.79
SNIP1-201ENST00000296215 DHHO43323 396 aa10.09□□□□□ -0.79
SNIP1-201ENST00000296215 SMIM10L2AP0DMW4 78 aa10.09□□□□□ -0.79
SNIP1-201ENST00000296215 SMIM10L2BP0DMW5 78 aa10.09□□□□□ -0.79
SNIP1-201ENST00000296215 ATP5G2Q06055 141 aa10.09□□□□□ -0.79
SNIP1-201ENST00000296215 KISS1Q15726 138 aa10.09□□□□□ -0.79
SNIP1-201ENST00000296215 C1orf162Q8NEQ5 155 aaPredicted RBP10.09□□□□□ -0.79
SNIP1-201ENST00000296215 LYPD6BQ8NI32 183 aa10.09□□□□□ -0.79
SNIP1-201ENST00000296215 ZNF764Q96H86 408 aaPredicted RBP10.09□□□□□ -0.79
SNIP1-201ENST00000296215 TUBGCP6Q96RT7 1819 aa10.09□□□□□ -0.79
SNIP1-201ENST00000296215 TRAV1-1A0A0B4J248 108 aa10.09□□□□□ -0.79
SNIP1-201ENST00000296215 SPAARA0A1B0GVQ0 90 aa10.09□□□□□ -0.79
SNIP1-201ENST00000296215 P01737 135 aa10.09□□□□□ -0.79
SNIP1-201ENST00000296215 PRSS57Q6UWY2 283 aa10.09□□□□□ -0.79
SNIP1-201ENST00000296215 DNM1P46Q6ZS02 220 aa10.09□□□□□ -0.79
SNIP1-201ENST00000296215 SH2D6Q7Z4S9 175 aa10.09□□□□□ -0.79
SNIP1-201ENST00000296215 PP6455Q8WZ26 134 aa10.09□□□□□ -0.79
SNIP1-201ENST00000296215 HSD17B10Q99714 261 aaKnown RBP10.09□□□□□ -0.79
SNIP1-201ENST00000296215 RTBDNQ9BSG5 229 aaPredicted RBP10.09□□□□□ -0.79
SNIP1-201ENST00000296215 PIK3C2AO00443 1686 aa10.09□□□□□ -0.79
SNIP1-201ENST00000296215 KIR2DS3K7RE56 304 aa10.08□□□□□ -0.8
SNIP1-201ENST00000296215 HOXD9P28356 352 aaPredicted RBP10.08□□□□□ -0.8
SNIP1-201ENST00000296215 KIR2DS3Q14952 304 aa10.08□□□□□ -0.8
SNIP1-201ENST00000296215 TNXAQ16473 311 aa10.08□□□□□ -0.8
SNIP1-201ENST00000296215 GAGE2AQ6NT46 116 aa10.08□□□□□ -0.8
SNIP1-201ENST00000296215 A8MWL6 223 aa10.08□□□□□ -0.8
SNIP1-201ENST00000296215 CEACAM4O75871 244 aa10.08□□□□□ -0.8
SNIP1-201ENST00000296215 PRNPP04156 253 aa10.08□□□□□ -0.8
SNIP1-201ENST00000296215 SPSB3Q6PJ21 355 aa10.08□□□□□ -0.8
SNIP1-201ENST00000296215 MAFAQ8NHW3 353 aaPredicted RBP10.08□□□□□ -0.8
SNIP1-201ENST00000296215 IL36GQ9NZH8 169 aa10.08□□□□□ -0.8
SNIP1-201ENST00000296215 PPYP01298 95 aa10.08□□□□□ -0.8
SNIP1-201ENST00000296215 PRR31Q5SQ13 230 aa10.08□□□□□ -0.8
SNIP1-201ENST00000296215 ALKAL1Q6UXT8 129 aa10.08□□□□□ -0.8
SNIP1-201ENST00000296215 PPP1R27Q86WC6 154 aa10.08□□□□□ -0.8
SNIP1-201ENST00000296215 PPDPFLQ8WWR9 84 aa10.08□□□□□ -0.8
SNIP1-201ENST00000296215 ZNF840PA6NDX5 716 aa10.08□□□□□ -0.8
SNIP1-201ENST00000296215 PRSS29PA6NIE9 313 aa10.08□□□□□ -0.8
SNIP1-201ENST00000296215 FNDC10F2Z333 226 aa10.08□□□□□ -0.8
SNIP1-201ENST00000296215 LYL1P12980 280 aa10.08□□□□□ -0.8
SNIP1-201ENST00000296215 RIGQ13278 110 aa10.08□□□□□ -0.8
SNIP1-201ENST00000296215 TMEM187Q14656 261 aa10.08□□□□□ -0.8
SNIP1-201ENST00000296215 PSMG4Q5JS54 123 aa10.08□□□□□ -0.8
SNIP1-201ENST00000296215 NT5CQ8TCD5 201 aa10.08□□□□□ -0.8
SNIP1-201ENST00000296215 TSKUQ8WUA8 353 aa10.08□□□□□ -0.8
SNIP1-201ENST00000296215 DLX4Q92988 240 aaPredicted RBP10.08□□□□□ -0.8
SNIP1-201ENST00000296215 SSBP3Q9BWW4 388 aaPredicted RBP10.08□□□□□ -0.8
SNIP1-201ENST00000296215 A0A0B4J2E0 115 aa10.07□□□□□ -0.8
SNIP1-201ENST00000296215 SMIM35A0A1B0GVV1 85 aa10.07□□□□□ -0.8
SNIP1-201ENST00000296215 A0A1B0GX12 115 aa10.07□□□□□ -0.8
SNIP1-201ENST00000296215 OPRK1P41145 380 aa10.07□□□□□ -0.8
SNIP1-201ENST00000296215 AGMATQ9BSE5 352 aa10.07□□□□□ -0.8
SNIP1-201ENST00000296215 CCDC88CQ9P219 2028 aa10.07□□□□□ -0.8
SNIP1-201ENST00000296215 SYS1-DBNDD2H3BUS1 97 aa10.07□□□□□ -0.8
SNIP1-201ENST00000296215 NGFRP08138 427 aa10.07□□□□□ -0.8
SNIP1-201ENST00000296215 SP7Q8TDD2 431 aaPredicted RBP10.07□□□□□ -0.8
SNIP1-201ENST00000296215 KISS1RQ969F8 398 aaPredicted RBP10.07□□□□□ -0.8
SNIP1-201ENST00000296215 TXNIPQ9H3M7 391 aa10.07□□□□□ -0.8
SNIP1-201ENST00000296215 PRTFDC1Q9NRG1 225 aa10.07□□□□□ -0.8
SNIP1-201ENST00000296215 JPT1Q9UK76 154 aa10.07□□□□□ -0.8
SNIP1-201ENST00000296215 COL5A2P05997 1499 aaPredicted RBP10.07□□□□□ -0.8
SNIP1-201ENST00000296215 PDE4DIPQ5VU43 2346 aa10.07□□□□□ -0.8
SNIP1-201ENST00000296215 DUX1O43812 170 aa10.07□□□□□ -0.8
SNIP1-201ENST00000296215 COX6CP09669 75 aa10.07□□□□□ -0.8
SNIP1-201ENST00000296215 TMEM230Q96A57 120 aa10.07□□□□□ -0.8
SNIP1-201ENST00000296215 DUX5Q96PT3 197 aa10.07□□□□□ -0.8
SNIP1-201ENST00000296215 INSL6Q9Y581 213 aa10.07□□□□□ -0.8
SNIP1-201ENST00000296215 KIR2DS5A0A0G2JLQ3 304 aa10.06□□□□□ -0.8
SNIP1-201ENST00000296215 A0A0G2JNG1 304 aa10.06□□□□□ -0.8
SNIP1-201ENST00000296215 RPL31P62899 125 aaKnown RBP10.06□□□□□ -0.8
SNIP1-201ENST00000296215 RPL8P62917 257 aaKnown RBP10.06□□□□□ -0.8
SNIP1-201ENST00000296215 KIR2DS5Q14953 304 aa10.06□□□□□ -0.8
SNIP1-201ENST00000296215 GAPTQ8N292 157 aa10.06□□□□□ -0.8
SNIP1-201ENST00000296215 COMMD5Q9GZQ3 224 aa10.06□□□□□ -0.8
SNIP1-201ENST00000296215 RFNGQ9Y644 331 aa10.06□□□□□ -0.8
SNIP1-201ENST00000296215 LMO7Q8WWI1 1683 aa10.06□□□□□ -0.8
SNIP1-201ENST00000296215 H3BMG7 143 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms