RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 FXYD6-FXYD2A0A087WZ82 144 aa12.31□□□□□ -0.44
CCDC140-201ENST00000295226 A0A0D9SG52 128 aa12.31□□□□□ -0.44
CCDC140-201ENST00000295226 ANKRD34BA5PLL1 514 aa12.31□□□□□ -0.44
CCDC140-201ENST00000295226 J3QLI3 93 aa12.31□□□□□ -0.44
CCDC140-201ENST00000295226 MPC2O95563 127 aa12.31□□□□□ -0.44
CCDC140-201ENST00000295226 DIRAS3O95661 229 aa12.31□□□□□ -0.44
CCDC140-201ENST00000295226 AKR1C4P17516 323 aa12.31□□□□□ -0.44
CCDC140-201ENST00000295226 VAMP1P23763 118 aa12.31□□□□□ -0.44
CCDC140-201ENST00000295226 BAMBIQ13145 260 aa12.31□□□□□ -0.44
CCDC140-201ENST00000295226 DIAPH2-AS1Q14236 149 aa12.31□□□□□ -0.44
CCDC140-201ENST00000295226 ZNF345Q14585 488 aa12.31□□□□□ -0.44
CCDC140-201ENST00000295226 SLC25A48Q6ZT89 311 aaKnown RBP12.31□□□□□ -0.44
CCDC140-201ENST00000295226 LHFPL4Q7Z7J7 247 aa12.31□□□□□ -0.44
CCDC140-201ENST00000295226 RBMXL1Q96E39 390 aaKnown RBP12.31□□□□□ -0.44
CCDC140-201ENST00000295226 GPHA2Q96T91 129 aa12.31□□□□□ -0.44
CCDC140-201ENST00000295226 AGMATQ9BSE5 352 aa12.31□□□□□ -0.44
CCDC140-201ENST00000295226 TOLLIPQ9H0E2 274 aa12.31□□□□□ -0.44
CCDC140-201ENST00000295226 FXYD6Q9H0Q3 95 aa12.31□□□□□ -0.44
CCDC140-201ENST00000295226 DBX1A6NMT0 343 aa12.3□□□□□ -0.44
CCDC140-201ENST00000295226 SFT2D2O95562 160 aa12.3□□□□□ -0.44
CCDC140-201ENST00000295226 IGLV1-47P01700 117 aa12.3□□□□□ -0.44
CCDC140-201ENST00000295226 LUMP51884 338 aaPredicted RBP12.3□□□□□ -0.44
CCDC140-201ENST00000295226 HERV-K104P61576 105 aa12.3□□□□□ -0.44
CCDC140-201ENST00000295226 EXOSC2Q13868 293 aaKnown RBP12.3□□□□□ -0.44
CCDC140-201ENST00000295226 TMEM30BQ3MIR4 351 aa12.3□□□□□ -0.44
CCDC140-201ENST00000295226 NCR3LG1Q68D85 454 aa12.3□□□□□ -0.44
CCDC140-201ENST00000295226 TMUB2Q71RG4 321 aa12.3□□□□□ -0.44
CCDC140-201ENST00000295226 LYG1Q8N1E2 194 aa12.3□□□□□ -0.44
CCDC140-201ENST00000295226 OR11H6Q8NGC7 330 aa12.3□□□□□ -0.44
CCDC140-201ENST00000295226 OR10X1Q8NGY0 326 aa12.3□□□□□ -0.44
CCDC140-201ENST00000295226 MFFQ9GZY8 342 aa12.3□□□□□ -0.44
CCDC140-201ENST00000295226 OR2D2Q9H210 308 aa12.3□□□□□ -0.44
CCDC140-201ENST00000295226 IFI27L2Q9H2X8 130 aa12.3□□□□□ -0.44
CCDC140-201ENST00000295226 C5orf66Q9H5L9 145 aa12.3□□□□□ -0.44
CCDC140-201ENST00000295226 RAB18Q9NP72 206 aa12.3□□□□□ -0.44
CCDC140-201ENST00000295226 CCL28Q9NRJ3 127 aa12.3□□□□□ -0.44
CCDC140-201ENST00000295226 C14orf166Q9Y224 244 aaKnown RBP12.3□□□□□ -0.44
CCDC140-201ENST00000295226 MAST4O15021 2626 aa12.3□□□□□ -0.44
CCDC140-201ENST00000295226 F8P00451 2351 aa12.3□□□□□ -0.44
CCDC140-201ENST00000295226 HSD17B6O14756 317 aa12.29□□□□□ -0.44
CCDC140-201ENST00000295226 OR2F2O95006 317 aa12.29□□□□□ -0.44
CCDC140-201ENST00000295226 PI3P19957 117 aa12.29□□□□□ -0.44
CCDC140-201ENST00000295226 UBE2E1P51965 193 aa12.29□□□□□ -0.44
CCDC140-201ENST00000295226 PRRX1P54821 245 aa12.29□□□□□ -0.44
CCDC140-201ENST00000295226 LINC00205P59089 165 aa12.29□□□□□ -0.44
CCDC140-201ENST00000295226 OR2F1Q13607 317 aa12.29□□□□□ -0.44
CCDC140-201ENST00000295226 RPL39P5Q59GN2 51 aa12.29□□□□□ -0.44
CCDC140-201ENST00000295226 GSG1LQ6UXU4 331 aa12.29□□□□□ -0.44
CCDC140-201ENST00000295226 ODF3L1Q8IXM7 274 aa12.29□□□□□ -0.44
CCDC140-201ENST00000295226 OR8H3Q8N146 312 aa12.29□□□□□ -0.44
CCDC140-201ENST00000295226 ADAD2Q8NCV1 583 aaKnown RBP12.29□□□□□ -0.44
CCDC140-201ENST00000295226 OR4P4Q8NGL7 312 aa12.29□□□□□ -0.44
CCDC140-201ENST00000295226 MOB3AQ96BX8 217 aa12.29□□□□□ -0.44
CCDC140-201ENST00000295226 C5orf30Q96GV9 206 aa12.29□□□□□ -0.44
CCDC140-201ENST00000295226 SLC5A7Q9GZV3 580 aa12.29□□□□□ -0.44
CCDC140-201ENST00000295226 ZFHX3Q15911 3703 aa12.29□□□□□ -0.44
CCDC140-201ENST00000295226 IGHV1-69DA0A0B4J2H0 117 aa12.29□□□□□ -0.44
CCDC140-201ENST00000295226 ODF3BA8MYP8 253 aa12.29□□□□□ -0.44
CCDC140-201ENST00000295226 B3GALNT1O75752 331 aa12.29□□□□□ -0.44
CCDC140-201ENST00000295226 IGHV1-69P01742 117 aa12.29□□□□□ -0.44
CCDC140-201ENST00000295226 REG1BP48304 166 aa12.29□□□□□ -0.44
CCDC140-201ENST00000295226 HLA-DRB5Q30154 266 aa12.29□□□□□ -0.44
CCDC140-201ENST00000295226 FAM120AOSQ5T036 256 aa12.29□□□□□ -0.44
CCDC140-201ENST00000295226 GPR157Q5UAW9 335 aa12.29□□□□□ -0.44
CCDC140-201ENST00000295226 C11orf87Q6NUJ2 197 aa12.29□□□□□ -0.44
CCDC140-201ENST00000295226 CLEC9AQ6UXN8 241 aa12.29□□□□□ -0.44
CCDC140-201ENST00000295226 ZNF546Q86UE3 836 aa12.29□□□□□ -0.44
CCDC140-201ENST00000295226 EDARADDQ8WWZ3 215 aa12.29□□□□□ -0.44
CCDC140-201ENST00000295226 C22orf15Q8WYQ4 148 aa12.29□□□□□ -0.44
CCDC140-201ENST00000295226 NMES1Q9C002 83 aa12.29□□□□□ -0.44
CCDC140-201ENST00000295226 ARL6Q9H0F7 186 aa12.29□□□□□ -0.44
CCDC140-201ENST00000295226 ANK3Q12955 4377 aaKnown RBP12.28□□□□□ -0.44
CCDC140-201ENST00000295226 SAA2-SAA4A0A096LPE2 208 aa12.28□□□□□ -0.44
CCDC140-201ENST00000295226 BUB1B-PAK6H3BSN5 160 aa12.28□□□□□ -0.44
CCDC140-201ENST00000295226 NPFFO15130 113 aa12.28□□□□□ -0.44
CCDC140-201ENST00000295226 PROP1O75360 226 aa12.28□□□□□ -0.44
CCDC140-201ENST00000295226 IGLV2-14P01704 120 aa12.28□□□□□ -0.44
CCDC140-201ENST00000295226 CTSDP07339 412 aaPredicted RBP12.28□□□□□ -0.44
CCDC140-201ENST00000295226 SAA2P0DJI9 122 aaPredicted RBP12.28□□□□□ -0.44
CCDC140-201ENST00000295226 PGAM2P15259 253 aa12.28□□□□□ -0.44
CCDC140-201ENST00000295226 GNRHRP30968 328 aa12.28□□□□□ -0.44
CCDC140-201ENST00000295226 SAA4P35542 130 aa12.28□□□□□ -0.44
CCDC140-201ENST00000295226 SLC51BQ86UW2 128 aa12.28□□□□□ -0.44
CCDC140-201ENST00000295226 LINC00311Q8N616 119 aa12.28□□□□□ -0.44
CCDC140-201ENST00000295226 BEND2Q8NDZ0 799 aa12.28□□□□□ -0.44
CCDC140-201ENST00000295226 THAP6Q8TBB0 222 aa12.28□□□□□ -0.44
CCDC140-201ENST00000295226 ZNF596Q8TC21 504 aa12.28□□□□□ -0.44
CCDC140-201ENST00000295226 CASTOR1Q8WTX7 329 aa12.28□□□□□ -0.44
CCDC140-201ENST00000295226 WDR89Q96FK6 387 aaPredicted RBP12.28□□□□□ -0.44
CCDC140-201ENST00000295226 RTBDNQ9BSG5 229 aaPredicted RBP12.28□□□□□ -0.44
CCDC140-201ENST00000295226 HILPDAQ9Y5L2 63 aa12.28□□□□□ -0.44
CCDC140-201ENST00000295226 MXRA5Q9NR99 2828 aa12.28□□□□□ -0.44
CCDC140-201ENST00000295226 TRAV14DV4A0A0A6YYC5 116 aa12.27□□□□□ -0.45
CCDC140-201ENST00000295226 TNFSF12O43508 249 aa12.27□□□□□ -0.45
CCDC140-201ENST00000295226 FOSL1P15407 271 aa12.27□□□□□ -0.45
CCDC140-201ENST00000295226 GPR12P47775 334 aa12.27□□□□□ -0.45
CCDC140-201ENST00000295226 LGALS4P56470 323 aa12.27□□□□□ -0.45
CCDC140-201ENST00000295226 Q3ZCU0 254 aa12.27□□□□□ -0.45
CCDC140-201ENST00000295226 PHLDA2Q53GA4 152 aa12.27□□□□□ -0.45
CCDC140-201ENST00000295226 ZNF818PQ6ZRF7 136 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms