RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 ACACBO00763 2458 aa10.21□□□□□ -0.77
SYNGAP1-201ENST00000293748 LOC102724200A0A096LPH7 203 aaPredicted RBP10.21□□□□□ -0.77
SYNGAP1-201ENST00000293748 IFI6P09912 130 aa10.21□□□□□ -0.77
SYNGAP1-201ENST00000293748 ASAH2BP0C7U1 165 aa10.21□□□□□ -0.77
SYNGAP1-201ENST00000293748 CCL2P13500 99 aa10.21□□□□□ -0.77
SYNGAP1-201ENST00000293748 PRSS12P56730 875 aa10.21□□□□□ -0.77
SYNGAP1-201ENST00000293748 TNFAIP6P98066 277 aaPredicted RBP10.21□□□□□ -0.77
SYNGAP1-201ENST00000293748 OR4X1Q8NH49 305 aa10.21□□□□□ -0.77
SYNGAP1-201ENST00000293748 PCGF1Q9BSM1 259 aa10.21□□□□□ -0.77
SYNGAP1-201ENST00000293748 ZNF665Q9H7R5 613 aa10.21□□□□□ -0.77
SYNGAP1-201ENST00000293748 AURKAIP1Q9NWT8 199 aaPredicted RBP10.21□□□□□ -0.77
SYNGAP1-201ENST00000293748 MEX3AA1L020 520 aaKnown RBP10.21□□□□□ -0.78
SYNGAP1-201ENST00000293748 KCNAB3O43448 404 aa10.21□□□□□ -0.78
SYNGAP1-201ENST00000293748 CD1BP29016 333 aa10.21□□□□□ -0.78
SYNGAP1-201ENST00000293748 NPVFQ9HCQ7 196 aa10.21□□□□□ -0.78
SYNGAP1-201ENST00000293748 RALYQ9UKM9 306 aaKnown RBP10.21□□□□□ -0.78
SYNGAP1-201ENST00000293748 REV3LO60673 3130 aa10.21□□□□□ -0.78
SYNGAP1-201ENST00000293748 H0YL77 283 aa10.21□□□□□ -0.78
SYNGAP1-201ENST00000293748 ZNF83P51522 516 aa10.21□□□□□ -0.78
SYNGAP1-201ENST00000293748 ABHD14AQ9BUJ0 271 aa10.21□□□□□ -0.78
SYNGAP1-201ENST00000293748 A0A1W2PR80 420 aa10.2□□□□□ -0.78
SYNGAP1-201ENST00000293748 MS4A18H0YCH9 400 aa10.2□□□□□ -0.78
SYNGAP1-201ENST00000293748 MS4A18Q3C1V0 323 aa10.2□□□□□ -0.78
SYNGAP1-201ENST00000293748 GFRALQ6UXV0 394 aa10.2□□□□□ -0.78
SYNGAP1-201ENST00000293748 RFLNBQ8N5W9 214 aa10.2□□□□□ -0.78
SYNGAP1-201ENST00000293748 APCDD1LQ8NCL9 501 aa10.2□□□□□ -0.78
SYNGAP1-201ENST00000293748 HDHD3Q9BSH5 251 aaPredicted RBP10.2□□□□□ -0.78
SYNGAP1-201ENST00000293748 ICE1Q9Y2F5 2266 aa10.2□□□□□ -0.78
SYNGAP1-201ENST00000293748 CDIPTO14735 213 aa10.2□□□□□ -0.78
SYNGAP1-201ENST00000293748 CD8AP01732 235 aa10.2□□□□□ -0.78
SYNGAP1-201ENST00000293748 ISG15P05161 165 aa10.2□□□□□ -0.78
SYNGAP1-201ENST00000293748 HIST1H1BP16401 226 aaKnown RBP10.2□□□□□ -0.78
SYNGAP1-201ENST00000293748 KLK2P20151 261 aa10.2□□□□□ -0.78
SYNGAP1-201ENST00000293748 SPATA45Q537H7 98 aa10.2□□□□□ -0.78
SYNGAP1-201ENST00000293748 NFAM1Q8NET5 270 aaPredicted RBP10.2□□□□□ -0.78
SYNGAP1-201ENST00000293748 OR8A1Q8NGG7 326 aa10.2□□□□□ -0.78
SYNGAP1-201ENST00000293748 AICDAQ9GZX7 198 aa10.2□□□□□ -0.78
SYNGAP1-201ENST00000293748 GLRX2Q9NS18 164 aa10.2□□□□□ -0.78
SYNGAP1-201ENST00000293748 UFC1Q9Y3C8 167 aa10.2□□□□□ -0.78
SYNGAP1-201ENST00000293748 A0A0C4DFX4 3053 aa10.2□□□□□ -0.78
SYNGAP1-201ENST00000293748 CENPVL1A0A0U1RR11 272 aa10.2□□□□□ -0.78
SYNGAP1-201ENST00000293748 C1QCP02747 245 aa10.2□□□□□ -0.78
SYNGAP1-201ENST00000293748 OR1K1Q8NGR3 316 aa10.2□□□□□ -0.78
SYNGAP1-201ENST00000293748 ZNF721Q8TF20 911 aa10.2□□□□□ -0.78
SYNGAP1-201ENST00000293748 AQP3Q92482 292 aa10.2□□□□□ -0.78
SYNGAP1-201ENST00000293748 NUDT16L1Q9BRJ7 211 aaKnown RBP10.2□□□□□ -0.78
SYNGAP1-201ENST00000293748 HRKO00198 91 aa10.19□□□□□ -0.78
SYNGAP1-201ENST00000293748 SYNGR1O43759 233 aa10.19□□□□□ -0.78
SYNGAP1-201ENST00000293748 UPK3AO75631 287 aa10.19□□□□□ -0.78
SYNGAP1-201ENST00000293748 NDUFB4O95168 129 aa10.19□□□□□ -0.78
SYNGAP1-201ENST00000293748 CA2P00918 260 aa10.19□□□□□ -0.78
SYNGAP1-201ENST00000293748 DANCRP0C864 163 aa10.19□□□□□ -0.78
SYNGAP1-201ENST00000293748 MEOX1P50221 254 aa10.19□□□□□ -0.78
SYNGAP1-201ENST00000293748 OR1L8Q8NGR8 309 aa10.19□□□□□ -0.78
SYNGAP1-201ENST00000293748 SDHCQ99643 169 aaPredicted RBP10.19□□□□□ -0.78
SYNGAP1-201ENST00000293748 RSG1Q9BU20 258 aa10.19□□□□□ -0.78
SYNGAP1-201ENST00000293748 PARD6GQ9BYG4 376 aaPredicted RBP10.19□□□□□ -0.78
SYNGAP1-201ENST00000293748 CARHSP1Q9Y2V2 147 aaKnown RBP10.19□□□□□ -0.78
SYNGAP1-201ENST00000293748 GOSR1O95249 250 aa10.19□□□□□ -0.78
SYNGAP1-201ENST00000293748 NGFRP08138 427 aa10.19□□□□□ -0.78
SYNGAP1-201ENST00000293748 PCP4P48539 62 aa10.19□□□□□ -0.78
SYNGAP1-201ENST00000293748 RND3P61587 244 aa10.19□□□□□ -0.78
SYNGAP1-201ENST00000293748 GABRA6Q16445 453 aa10.19□□□□□ -0.78
SYNGAP1-201ENST00000293748 TNXAQ16473 311 aa10.19□□□□□ -0.78
SYNGAP1-201ENST00000293748 MYOZ3Q8TDC0 251 aa10.19□□□□□ -0.78
SYNGAP1-201ENST00000293748 RHOVQ96L33 236 aa10.19□□□□□ -0.78
SYNGAP1-201ENST00000293748 GGACTQ9BVM4 153 aa10.19□□□□□ -0.78
SYNGAP1-201ENST00000293748 UNC80Q8N2C7 3258 aa10.19□□□□□ -0.78
SYNGAP1-201ENST00000293748 C3orf80F5H4A9 247 aa10.19□□□□□ -0.78
SYNGAP1-201ENST00000293748 Q5BKY6 102 aa10.19□□□□□ -0.78
SYNGAP1-201ENST00000293748 SLC35E4Q6ICL7 350 aa10.19□□□□□ -0.78
SYNGAP1-201ENST00000293748 IGFL3Q6UXB1 125 aa10.19□□□□□ -0.78
SYNGAP1-201ENST00000293748 AP5S1Q9NUS5 200 aa10.19□□□□□ -0.78
SYNGAP1-201ENST00000293748 A8MXK9 166 aa10.19□□□□□ -0.78
SYNGAP1-201ENST00000293748 PIN1P1O15428 100 aa10.19□□□□□ -0.78
SYNGAP1-201ENST00000293748 TBX6O95947 436 aaPredicted RBP10.19□□□□□ -0.78
SYNGAP1-201ENST00000293748 CELA2AP08217 269 aa10.19□□□□□ -0.78
SYNGAP1-201ENST00000293748 FABP2P12104 132 aa10.19□□□□□ -0.78
SYNGAP1-201ENST00000293748 HINT1P49773 126 aaPredicted RBP10.19□□□□□ -0.78
SYNGAP1-201ENST00000293748 DLX1P56177 255 aa10.19□□□□□ -0.78
SYNGAP1-201ENST00000293748 KRTCAP3Q53RY4 240 aa10.19□□□□□ -0.78
SYNGAP1-201ENST00000293748 TAF15Q92804 592 aaKnown RBP eCLIP10.19□□□□□ -0.78
SYNGAP1-201ENST00000293748 GPR35Q9HC97 309 aa10.19□□□□□ -0.78
SYNGAP1-201ENST00000293748 CISD1Q9NZ45 108 aaKnown RBP10.19□□□□□ -0.78
SYNGAP1-201ENST00000293748 PIPOXQ9P0Z9 390 aa10.19□□□□□ -0.78
SYNGAP1-201ENST00000293748 WIPI2Q9Y4P8 454 aa10.19□□□□□ -0.78
SYNGAP1-201ENST00000293748 HEATR5BQ9P2D3 2071 aa10.19□□□□□ -0.78
SYNGAP1-201ENST00000293748 PTPRBP23467 1997 aa10.18□□□□□ -0.78
SYNGAP1-201ENST00000293748 SPTA1P02549 2419 aa10.18□□□□□ -0.78
SYNGAP1-201ENST00000293748 TRAV38-1A0A0B4J264 116 aa10.18□□□□□ -0.78
SYNGAP1-201ENST00000293748 A0A0B4J293 547 aa10.18□□□□□ -0.78
SYNGAP1-201ENST00000293748 FAM90A10PA6NDY2 464 aa10.18□□□□□ -0.78
SYNGAP1-201ENST00000293748 FAM90A18PA6NE21 464 aa10.18□□□□□ -0.78
SYNGAP1-201ENST00000293748 FAM90A16PA6NEW6 464 aa10.18□□□□□ -0.78
SYNGAP1-201ENST00000293748 FAM90A20PA6NIJ5 464 aa10.18□□□□□ -0.78
SYNGAP1-201ENST00000293748 FAM90A8PA6NJQ4 464 aa10.18□□□□□ -0.78
SYNGAP1-201ENST00000293748 FAM90A7PA6NKC0 464 aa10.18□□□□□ -0.78
SYNGAP1-201ENST00000293748 TMEM210A6NLX4 147 aa10.18□□□□□ -0.78
SYNGAP1-201ENST00000293748 FAM90A22PA8MWA6 464 aa10.18□□□□□ -0.78
SYNGAP1-201ENST00000293748 FAM90A12PA8MX19 464 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms