RNA–Protein interactions for RNA: ENST00000292729.12

USP41-201, Transcript of ubiquitin specific peptidase 41, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene USP41, Length 920 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-201ENST00000292729 PSORS1C1Q9UIG5 152 aa7.8□□□□□ -1.16
USP41-201ENST00000292729 VPS13DQ5THJ4 4388 aa7.8□□□□□ -1.16
USP41-201ENST00000292729 FAM90A7PA6NKC0 464 aa7.79□□□□□ -1.16
USP41-201ENST00000292729 FAM90A23PA8MXZ1 464 aa7.79□□□□□ -1.16
USP41-201ENST00000292729 SPRY2O43597 315 aa7.79□□□□□ -1.16
USP41-201ENST00000292729 GPX5O75715 221 aa7.79□□□□□ -1.16
USP41-201ENST00000292729 CDK1P06493 297 aa7.79□□□□□ -1.16
USP41-201ENST00000292729 TCTAP57738 103 aa7.79□□□□□ -1.16
USP41-201ENST00000292729 PPP3R1P63098 170 aa7.79□□□□□ -1.16
USP41-201ENST00000292729 ANKRD55Q3KP44 614 aa7.79□□□□□ -1.16
USP41-201ENST00000292729 SLC22A6Q4U2R8 563 aa7.79□□□□□ -1.16
USP41-201ENST00000292729 FAM209BQ5JX69 171 aa7.79□□□□□ -1.16
USP41-201ENST00000292729 DDI2Q5TDH0 399 aa7.79□□□□□ -1.16
USP41-201ENST00000292729 DMKNQ6E0U4 476 aaPredicted RBP7.79□□□□□ -1.16
USP41-201ENST00000292729 GLDNQ6ZMI3 551 aaPredicted RBP7.79□□□□□ -1.16
USP41-201ENST00000292729 SYS1Q8N2H4 156 aa7.79□□□□□ -1.16
USP41-201ENST00000292729 OR13F1Q8NGS4 319 aa7.79□□□□□ -1.16
USP41-201ENST00000292729 MUL1Q969V5 352 aa7.79□□□□□ -1.16
USP41-201ENST00000292729 SULT4A1Q9BR01 284 aa7.79□□□□□ -1.16
USP41-201ENST00000292729 MRPS18AQ9NVS2 196 aaKnown RBP7.79□□□□□ -1.16
USP41-201ENST00000292729 TAS2R4Q9NYW5 299 aa7.79□□□□□ -1.16
USP41-201ENST00000292729 RSL24D1Q9UHA3 163 aaKnown RBP7.79□□□□□ -1.16
USP41-201ENST00000292729 PEX16Q9Y5Y5 336 aa7.79□□□□□ -1.16
USP41-201ENST00000292729 DNAH6Q9C0G6 4158 aa7.79□□□□□ -1.16
USP41-201ENST00000292729 A0A1W2PP11 408 aa7.78□□□□□ -1.16
USP41-201ENST00000292729 MSGN1A6NI15 193 aa7.78□□□□□ -1.16
USP41-201ENST00000292729 UBE2CO00762 179 aa7.78□□□□□ -1.16
USP41-201ENST00000292729 FOLR2P14207 255 aa7.78□□□□□ -1.16
USP41-201ENST00000292729 CPEP16870 476 aa7.78□□□□□ -1.16
USP41-201ENST00000292729 DCKP27707 260 aa7.78□□□□□ -1.16
USP41-201ENST00000292729 MAP2K4P45985 399 aa7.78□□□□□ -1.16
USP41-201ENST00000292729 APOC4P55056 127 aa7.78□□□□□ -1.16
USP41-201ENST00000292729 RPL39P5Q59GN2 51 aa7.78□□□□□ -1.16
USP41-201ENST00000292729 UBE2UQ5VVX9 321 aa7.78□□□□□ -1.16
USP41-201ENST00000292729 XAF1Q6GPH4 301 aa7.78□□□□□ -1.16
USP41-201ENST00000292729 AHSA2Q719I0 299 aa7.78□□□□□ -1.16
USP41-201ENST00000292729 ZNF367Q7RTV3 350 aa7.78□□□□□ -1.16
USP41-201ENST00000292729 OR52B4Q8NGK2 314 aa7.78□□□□□ -1.16
USP41-201ENST00000292729 RAB2BQ8WUD1 216 aa7.78□□□□□ -1.16
USP41-201ENST00000292729 THRSPQ92748 146 aa7.78□□□□□ -1.16
USP41-201ENST00000292729 WDR89Q96FK6 387 aaPredicted RBP7.78□□□□□ -1.16
USP41-201ENST00000292729 PDCD1LG2Q9BQ51 273 aa7.78□□□□□ -1.16
USP41-201ENST00000292729 PTTG2Q9NZH5 202 aa7.78□□□□□ -1.16
USP41-201ENST00000292729 ABCA13Q86UQ4 5058 aa7.78□□□□□ -1.16
USP41-201ENST00000292729 C2orf70A6NJV1 201 aa7.77□□□□□ -1.17
USP41-201ENST00000292729 PTGES3LE9PB15 166 aa7.77□□□□□ -1.17
USP41-201ENST00000292729 BMPR1BO00238 502 aa7.77□□□□□ -1.17
USP41-201ENST00000292729 ITGB1BP1O14713 200 aa7.77□□□□□ -1.17
USP41-201ENST00000292729 ST8SIA5O15466 376 aa7.77□□□□□ -1.17
USP41-201ENST00000292729 FUT3P21217 361 aa7.77□□□□□ -1.17
USP41-201ENST00000292729 BDKRB2P30411 391 aa7.77□□□□□ -1.17
USP41-201ENST00000292729 SOX2P48431 317 aa7.77□□□□□ -1.17
USP41-201ENST00000292729 TMBIM6P55061 237 aa7.77□□□□□ -1.17
USP41-201ENST00000292729 RPS16P62249 146 aaKnown RBP7.77□□□□□ -1.17
USP41-201ENST00000292729 PRR20EP86478 221 aa7.77□□□□□ -1.17
USP41-201ENST00000292729 PRR20CP86479 221 aa7.77□□□□□ -1.17
USP41-201ENST00000292729 PRR20DP86480 221 aa7.77□□□□□ -1.17
USP41-201ENST00000292729 PRR20BP86481 221 aa7.77□□□□□ -1.17
USP41-201ENST00000292729 PRR20AP86496 221 aa7.77□□□□□ -1.17
USP41-201ENST00000292729 NEDD8Q15843 81 aa7.77□□□□□ -1.17
USP41-201ENST00000292729 PDPNQ86YL7 162 aa7.77□□□□□ -1.17
USP41-201ENST00000292729 MRPL30Q8TCC3 161 aaKnown RBP7.77□□□□□ -1.17
USP41-201ENST00000292729 GPR148Q8TDV2 347 aa7.77□□□□□ -1.17
USP41-201ENST00000292729 CCDC90BQ9GZT6 254 aa7.77□□□□□ -1.17
USP41-201ENST00000292729 PARP12Q9H0J9 701 aaKnown RBP7.77□□□□□ -1.17
USP41-201ENST00000292729 ACOT13Q9NPJ3 140 aa7.77□□□□□ -1.17
USP41-201ENST00000292729 COA4Q9NYJ1 87 aa7.77□□□□□ -1.17
USP41-201ENST00000292729 ABRACLQ9P1F3 81 aa7.77□□□□□ -1.17
USP41-201ENST00000292729 EXOGQ9Y2C4 368 aaKnown RBP7.77□□□□□ -1.17
USP41-201ENST00000292729 PKHD1P08F94 4074 aa7.76□□□□□ -1.17
USP41-201ENST00000292729 A0A1B0GVY2 172 aa7.76□□□□□ -1.17
USP41-201ENST00000292729 UBE2QL1A1L167 161 aa7.76□□□□□ -1.17
USP41-201ENST00000292729 CCDC160A6NGH7 325 aa7.76□□□□□ -1.17
USP41-201ENST00000292729 FAM223BA6NKX1 122 aa7.76□□□□□ -1.17
USP41-201ENST00000292729 LGALS9O00182 355 aa7.76□□□□□ -1.17
USP41-201ENST00000292729 TUSC2O75896 110 aa7.76□□□□□ -1.17
USP41-201ENST00000292729 GBX2P52951 348 aaPredicted RBP7.76□□□□□ -1.17
USP41-201ENST00000292729 DEFA5Q01523 94 aa7.76□□□□□ -1.17
USP41-201ENST00000292729 ZNF45Q02386 682 aa7.76□□□□□ -1.17
USP41-201ENST00000292729 ST3GAL4Q11206 333 aa7.76□□□□□ -1.17
USP41-201ENST00000292729 IRF3Q14653 427 aa7.76□□□□□ -1.17
USP41-201ENST00000292729 HMGN3Q15651 99 aa7.76□□□□□ -1.17
USP41-201ENST00000292729 SMN1Q16637 294 aaKnown RBP7.76□□□□□ -1.17
USP41-201ENST00000292729 ZNF57Q68EA5 555 aaPredicted RBP7.76□□□□□ -1.17
USP41-201ENST00000292729 FAM223AQ8IWN6 122 aa7.76□□□□□ -1.17
USP41-201ENST00000292729 GGHQ92820 318 aa7.76□□□□□ -1.17
USP41-201ENST00000292729 RNF183Q96D59 192 aa7.76□□□□□ -1.17
USP41-201ENST00000292729 TMEM80Q96HE8 168 aa7.76□□□□□ -1.17
USP41-201ENST00000292729 OR14A2Q96R54 314 aa7.76□□□□□ -1.17
USP41-201ENST00000292729 MND1Q9BWT6 205 aa7.76□□□□□ -1.17
USP41-201ENST00000292729 MFFQ9GZY8 342 aa7.76□□□□□ -1.17
USP41-201ENST00000292729 ISG20L2Q9H9L3 353 aaKnown RBP7.76□□□□□ -1.17
USP41-201ENST00000292729 FGF20Q9NP95 211 aaPredicted RBP7.76□□□□□ -1.17
USP41-201ENST00000292729 DIMT1Q9UNQ2 313 aaKnown RBP7.76□□□□□ -1.17
USP41-201ENST00000292729 EXOSC1Q9Y3B2 195 aaKnown RBP7.76□□□□□ -1.17
USP41-201ENST00000292729 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.75□□□□□ -1.17
USP41-201ENST00000292729 KIR2DL5BA0A0G2JN68 375 aa7.75□□□□□ -1.17
USP41-201ENST00000292729 KIR2DL5BA0A0G2JPC4 375 aa7.75□□□□□ -1.17
USP41-201ENST00000292729 APOA2P02652 100 aa7.75□□□□□ -1.17
USP41-201ENST00000292729 IGKV1-16P04430 117 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms