RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 VWCEQ96DN2 955 aa10.95□□□□□ -0.66
PTCD1-201ENST00000292478 IGLV3-12A0A075B6K2 115 aa10.95□□□□□ -0.66
PTCD1-201ENST00000292478 CSN3P07498 182 aa10.95□□□□□ -0.66
PTCD1-201ENST00000292478 LINC00869P0C866 280 aa10.95□□□□□ -0.66
PTCD1-201ENST00000292478 CLDN18P56856 261 aa10.95□□□□□ -0.66
PTCD1-201ENST00000292478 PKIAP61925 76 aa10.95□□□□□ -0.66
PTCD1-201ENST00000292478 OR4A5Q8NH83 315 aa10.95□□□□□ -0.66
PTCD1-201ENST00000292478 OR9G1Q8NH87 305 aa10.95□□□□□ -0.66
PTCD1-201ENST00000292478 ATG2BQ96BY7 2078 aa10.95□□□□□ -0.66
PTCD1-201ENST00000292478 LOC101059948A0A1B0GTJ6 334 aa10.95□□□□□ -0.66
PTCD1-201ENST00000292478 SYNGR3O43761 229 aa10.95□□□□□ -0.66
PTCD1-201ENST00000292478 OR4C12Q96R67 309 aa10.95□□□□□ -0.66
PTCD1-201ENST00000292478 PSMG3Q9BT73 122 aaPredicted RBP10.95□□□□□ -0.66
PTCD1-201ENST00000292478 A0A087X0M5 115 aa10.95□□□□□ -0.66
PTCD1-201ENST00000292478 A0A0G2JK05 382 aa10.95□□□□□ -0.66
PTCD1-201ENST00000292478 hCG_38984A0A1B0GV85 526 aa10.95□□□□□ -0.66
PTCD1-201ENST00000292478 A0A1B0GX30 115 aa10.95□□□□□ -0.66
PTCD1-201ENST00000292478 MARCH11A6NNE9 402 aa10.95□□□□□ -0.66
PTCD1-201ENST00000292478 BMPR1BO00238 502 aa10.95□□□□□ -0.66
PTCD1-201ENST00000292478 RND3P61587 244 aa10.95□□□□□ -0.66
PTCD1-201ENST00000292478 IZUMO4Q1ZYL8 232 aa10.95□□□□□ -0.66
PTCD1-201ENST00000292478 DGAT2L7PQ6IED9 249 aa10.95□□□□□ -0.66
PTCD1-201ENST00000292478 OR52M1Q8NGK5 317 aa10.95□□□□□ -0.66
PTCD1-201ENST00000292478 SDHCQ99643 169 aaPredicted RBP10.95□□□□□ -0.66
PTCD1-201ENST00000292478 PCGF1Q9BSM1 259 aa10.95□□□□□ -0.66
PTCD1-201ENST00000292478 FOXD3Q9UJU5 478 aaPredicted RBP10.95□□□□□ -0.66
PTCD1-201ENST00000292478 KCNAB3O43448 404 aa10.94□□□□□ -0.66
PTCD1-201ENST00000292478 CLEC2AQ6UVW9 174 aa10.94□□□□□ -0.66
PTCD1-201ENST00000292478 STPG3Q8N7X2 389 aa10.94□□□□□ -0.66
PTCD1-201ENST00000292478 OR2D3Q8NGH3 330 aa10.94□□□□□ -0.66
PTCD1-201ENST00000292478 PLSCR2Q9NRY7 297 aa10.94□□□□□ -0.66
PTCD1-201ENST00000292478 IL36RNQ9UBH0 155 aa10.94□□□□□ -0.66
PTCD1-201ENST00000292478 RNF115Q9Y4L5 304 aa10.94□□□□□ -0.66
PTCD1-201ENST00000292478 A0A1W2PS18 150 aa10.94□□□□□ -0.66
PTCD1-201ENST00000292478 ZNF146Q15072 292 aa10.94□□□□□ -0.66
PTCD1-201ENST00000292478 GUCA2BQ16661 112 aa10.94□□□□□ -0.66
PTCD1-201ENST00000292478 ZNF818PQ6ZRF7 136 aa10.94□□□□□ -0.66
PTCD1-201ENST00000292478 TGFBR3LH3BV60 316 aa10.94□□□□□ -0.66
PTCD1-201ENST00000292478 ID4P47928 161 aa10.94□□□□□ -0.66
PTCD1-201ENST00000292478 UNC119Q13432 240 aa10.94□□□□□ -0.66
PTCD1-201ENST00000292478 TIMM23BQ5SRD1 257 aa10.94□□□□□ -0.66
PTCD1-201ENST00000292478 PUSL1Q8N0Z8 303 aaKnown RBP10.94□□□□□ -0.66
PTCD1-201ENST00000292478 MYOZ3Q8TDC0 251 aa10.94□□□□□ -0.66
PTCD1-201ENST00000292478 FAM216AQ8WUB2 273 aa10.94□□□□□ -0.66
PTCD1-201ENST00000292478 IL17BQ9UHF5 180 aa10.94□□□□□ -0.66
PTCD1-201ENST00000292478 ANKRD36A6QL64 1941 aa10.94□□□□□ -0.66
PTCD1-201ENST00000292478 NDUFB4O95168 129 aa10.93□□□□□ -0.66
PTCD1-201ENST00000292478 HOXA4Q00056 320 aaPredicted RBP10.93□□□□□ -0.66
PTCD1-201ENST00000292478 ZNF273Q14593 569 aa10.93□□□□□ -0.66
PTCD1-201ENST00000292478 BPIFA4PQ86YQ2 179 aa10.93□□□□□ -0.66
PTCD1-201ENST00000292478 OR11H4Q8NGC9 324 aa10.93□□□□□ -0.66
PTCD1-201ENST00000292478 MRPL32Q9BYC8 188 aaKnown RBP10.93□□□□□ -0.66
PTCD1-201ENST00000292478 FOXJ2Q9P0K8 574 aa10.93□□□□□ -0.66
PTCD1-201ENST00000292478 IFITM2Q01629 132 aa10.93□□□□□ -0.66
PTCD1-201ENST00000292478 PRNTQ86SH4 94 aa10.93□□□□□ -0.66
PTCD1-201ENST00000292478 OR4C13Q8NGP0 309 aa10.93□□□□□ -0.66
PTCD1-201ENST00000292478 NPBWR2P48146 333 aa10.93□□□□□ -0.66
PTCD1-201ENST00000292478 PPOXP50336 477 aa10.93□□□□□ -0.66
PTCD1-201ENST00000292478 SMAGPQ0VAQ4 97 aa10.93□□□□□ -0.66
PTCD1-201ENST00000292478 IMMP1LQ96LU5 166 aa10.93□□□□□ -0.66
PTCD1-201ENST00000292478 C1QTNF5Q9BXJ0 243 aa10.93□□□□□ -0.66
PTCD1-201ENST00000292478 GLRXP35754 106 aa10.93□□□□□ -0.66
PTCD1-201ENST00000292478 CSRP2Q16527 193 aa10.93□□□□□ -0.66
PTCD1-201ENST00000292478 MRPL14Q6P1L8 145 aaKnown RBP10.93□□□□□ -0.66
PTCD1-201ENST00000292478 B9A039 149 aa10.93□□□□□ -0.66
PTCD1-201ENST00000292478 TBX6O95947 436 aaPredicted RBP10.93□□□□□ -0.66
PTCD1-201ENST00000292478 C8orf88P0DMB2 117 aa10.93□□□□□ -0.66
PTCD1-201ENST00000292478 LTBP1Q14766 1721 aa10.93□□□□□ -0.66
PTCD1-201ENST00000292478 IBA57Q5T440 356 aaKnown RBP10.93□□□□□ -0.66
PTCD1-201ENST00000292478 DNAJC4Q9NNZ3 241 aa10.93□□□□□ -0.66
PTCD1-201ENST00000292478 TNFRSF19Q9NS68 423 aa10.93□□□□□ -0.66
PTCD1-201ENST00000292478 SHISA3A0PJX4 238 aa10.92□□□□□ -0.66
PTCD1-201ENST00000292478 TMEM189A5PLL7 270 aa10.92□□□□□ -0.66
PTCD1-201ENST00000292478 ZIC3O60481 467 aa10.92□□□□□ -0.66
PTCD1-201ENST00000292478 HLA-DQA1P01909 254 aa10.92□□□□□ -0.66
PTCD1-201ENST00000292478 CEBPDP49716 269 aaPredicted RBP10.92□□□□□ -0.66
PTCD1-201ENST00000292478 PCSK4Q6UW60 755 aa10.92□□□□□ -0.66
PTCD1-201ENST00000292478 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.92□□□□□ -0.66
PTCD1-201ENST00000292478 GALNT14Q96FL9 552 aa10.92□□□□□ -0.66
PTCD1-201ENST00000292478 QTRT1Q9BXR0 403 aaKnown RBP10.92□□□□□ -0.66
PTCD1-201ENST00000292478 IGLV3-32A0A0A0MS00 114 aa10.92□□□□□ -0.66
PTCD1-201ENST00000292478 ERVH48-1M5A8F1 160 aa10.92□□□□□ -0.66
PTCD1-201ENST00000292478 KBTBD11O94819 623 aa10.92□□□□□ -0.66
PTCD1-201ENST00000292478 ZNF708P17019 499 aa10.92□□□□□ -0.66
PTCD1-201ENST00000292478 RPL7P18124 248 aaKnown RBP10.92□□□□□ -0.66
PTCD1-201ENST00000292478 MFAP4P55083 255 aa10.92□□□□□ -0.66
PTCD1-201ENST00000292478 RPS20P60866 119 aaKnown RBP10.92□□□□□ -0.66
PTCD1-201ENST00000292478 PSG9Q00887 426 aa10.92□□□□□ -0.66
PTCD1-201ENST00000292478 DRAM1Q8N682 238 aa10.92□□□□□ -0.66
PTCD1-201ENST00000292478 EFEMP2O95967 443 aa10.92□□□□□ -0.66
PTCD1-201ENST00000292478 RAB9AP51151 201 aa10.92□□□□□ -0.66
PTCD1-201ENST00000292478 VWA1Q6PCB0 445 aa10.92□□□□□ -0.66
PTCD1-201ENST00000292478 METTL26Q96S19 204 aa10.92□□□□□ -0.66
PTCD1-201ENST00000292478 MRPL37Q9BZE1 423 aaKnown RBP10.92□□□□□ -0.66
PTCD1-201ENST00000292478 LPAR2Q9HBW0 351 aa10.92□□□□□ -0.66
PTCD1-201ENST00000292478 TCF19Q9Y242 345 aa10.92□□□□□ -0.66
PTCD1-201ENST00000292478 S1PR2O95136 353 aa10.92□□□□□ -0.66
PTCD1-201ENST00000292478 IGFBP3P17936 291 aaPredicted RBP10.92□□□□□ -0.66
PTCD1-201ENST00000292478 LTBRP36941 435 aa10.92□□□□□ -0.66
PTCD1-201ENST00000292478 MFAP2P55001 183 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms