RNA–Protein interactions for RNA: ENST00000291300.8

HIF3A-203, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-203ENST00000291300 ZNF251Q9BRH9 671 aa13.75□□□□□ -0.21
HIF3A-203ENST00000291300 ARV1Q9H2C2 271 aa13.75□□□□□ -0.21
HIF3A-203ENST00000291300 LINC00574Q9H8X3 128 aa13.75□□□□□ -0.21
HIF3A-203ENST00000291300 JTBO76095 146 aa13.74□□□□□ -0.21
HIF3A-203ENST00000291300 PVALBP20472 110 aaPredicted RBP13.74□□□□□ -0.21
HIF3A-203ENST00000291300 TMEM267Q0VDI3 215 aaPredicted RBP13.74□□□□□ -0.21
HIF3A-203ENST00000291300 VKORC1L1Q8N0U8 176 aa13.74□□□□□ -0.21
HIF3A-203ENST00000291300 UBAC2Q8NBM4 344 aa13.74□□□□□ -0.21
HIF3A-203ENST00000291300 PFDN2Q9UHV9 154 aa13.74□□□□□ -0.21
HIF3A-203ENST00000291300 C19orf84I3L1E1 186 aa13.73□□□□□ -0.21
HIF3A-203ENST00000291300 SYNGR2O43760 224 aa13.73□□□□□ -0.21
HIF3A-203ENST00000291300 SOD3P08294 240 aa13.73□□□□□ -0.21
HIF3A-203ENST00000291300 DYNLT3P51808 116 aa13.73□□□□□ -0.21
HIF3A-203ENST00000291300 LRRC46Q96FV0 321 aa13.73□□□□□ -0.21
HIF3A-203ENST00000291300 LINC00052Q96N35 136 aa13.73□□□□□ -0.21
HIF3A-203ENST00000291300 RPUSD1Q9UJJ7 312 aaKnown RBP13.73□□□□□ -0.21
HIF3A-203ENST00000291300 LINC00312Q9Y6C7 94 aa13.73□□□□□ -0.21
HIF3A-203ENST00000291300 hADV38S2A0JD32 116 aa13.73□□□□□ -0.21
HIF3A-203ENST00000291300 FGF2P09038 288 aa13.73□□□□□ -0.21
HIF3A-203ENST00000291300 LYG1Q8N1E2 194 aa13.73□□□□□ -0.21
HIF3A-203ENST00000291300 HSD17B11Q8NBQ5 300 aa13.73□□□□□ -0.21
HIF3A-203ENST00000291300 OR5C1Q8NGR4 320 aa13.73□□□□□ -0.21
HIF3A-203ENST00000291300 USP24Q9UPU5 2620 aa13.72□□□□□ -0.21
HIF3A-203ENST00000291300 ARL16Q0P5N6 197 aa13.72□□□□□ -0.21
HIF3A-203ENST00000291300 HFEQ30201 348 aa13.72□□□□□ -0.21
HIF3A-203ENST00000291300 SPINK9Q5DT21 86 aa13.72□□□□□ -0.21
HIF3A-203ENST00000291300 HAPLN4Q86UW8 402 aa13.72□□□□□ -0.21
HIF3A-203ENST00000291300 DDB2Q92466 427 aa13.72□□□□□ -0.21
HIF3A-203ENST00000291300 ZNF705EA8MWA4 302 aaPredicted RBP13.72□□□□□ -0.21
HIF3A-203ENST00000291300 TXNL1O43396 289 aa13.72□□□□□ -0.21
HIF3A-203ENST00000291300 NDUFB3O43676 98 aa13.72□□□□□ -0.21
HIF3A-203ENST00000291300 OR9G9P0C7N8 305 aa13.72□□□□□ -0.21
HIF3A-203ENST00000291300 MMP9P14780 707 aa13.72□□□□□ -0.21
HIF3A-203ENST00000291300 AVPI1Q5T686 147 aa13.72□□□□□ -0.21
HIF3A-203ENST00000291300 SSX9Q7RTT3 188 aa13.72□□□□□ -0.21
HIF3A-203ENST00000291300 RNF141Q8WVD5 230 aa13.72□□□□□ -0.21
HIF3A-203ENST00000291300 FAM122AQ96E09 287 aa13.72□□□□□ -0.21
HIF3A-203ENST00000291300 RBKSQ9H477 322 aa13.72□□□□□ -0.21
HIF3A-203ENST00000291300 LPAR3Q9UBY5 353 aa13.72□□□□□ -0.21
HIF3A-203ENST00000291300 TMEM8BA6NDV4 472 aa13.71□□□□□ -0.21
HIF3A-203ENST00000291300 MARCH11A6NNE9 402 aa13.71□□□□□ -0.21
HIF3A-203ENST00000291300 A8MXK9 166 aa13.71□□□□□ -0.21
HIF3A-203ENST00000291300 DLX1P56177 255 aa13.71□□□□□ -0.21
HIF3A-203ENST00000291300 C4orf17Q53FE4 359 aa13.71□□□□□ -0.21
HIF3A-203ENST00000291300 ZNF383Q8NA42 475 aa13.71□□□□□ -0.21
HIF3A-203ENST00000291300 ZDHHC16Q969W1 377 aa13.71□□□□□ -0.21
HIF3A-203ENST00000291300 R3HDM4Q96D70 268 aa13.71□□□□□ -0.21
HIF3A-203ENST00000291300 GINS3Q9BRX5 216 aa13.71□□□□□ -0.21
HIF3A-203ENST00000291300 TRAV3A0A0B4J244 114 aa13.7□□□□□ -0.22
HIF3A-203ENST00000291300 TOR1AO14656 332 aa13.7□□□□□ -0.22
HIF3A-203ENST00000291300 ITGB1BP1O14713 200 aa13.7□□□□□ -0.22
HIF3A-203ENST00000291300 C1QL1O75973 258 aa13.7□□□□□ -0.22
HIF3A-203ENST00000291300 FHITP49789 147 aa13.7□□□□□ -0.22
HIF3A-203ENST00000291300 TNFRSF9Q07011 255 aa13.7□□□□□ -0.22
HIF3A-203ENST00000291300 LRRC10Q5BKY1 277 aa13.7□□□□□ -0.22
HIF3A-203ENST00000291300 STPG2Q8N412 459 aa13.7□□□□□ -0.22
HIF3A-203ENST00000291300 ZNF714Q96N38 554 aa13.7□□□□□ -0.22
HIF3A-203ENST00000291300 SLC25A31Q9H0C2 315 aa13.7□□□□□ -0.22
HIF3A-203ENST00000291300 PSENENQ9NZ42 101 aa13.7□□□□□ -0.22
HIF3A-203ENST00000291300 TET2Q6N021 2002 aaPredicted RBP13.7□□□□□ -0.22
HIF3A-203ENST00000291300 TACC2O95359 2948 aa13.7□□□□□ -0.22
HIF3A-203ENST00000291300 MED6O75586 246 aa13.7□□□□□ -0.22
HIF3A-203ENST00000291300 METTL15P1P0C7V9 234 aa13.7□□□□□ -0.22
HIF3A-203ENST00000291300 SULT1A2P50226 295 aa13.7□□□□□ -0.22
HIF3A-203ENST00000291300 OR2B8PP59922 312 aa13.7□□□□□ -0.22
HIF3A-203ENST00000291300 UBE2KP61086 200 aa13.7□□□□□ -0.22
HIF3A-203ENST00000291300 MRPS11P82912 194 aaKnown RBP13.7□□□□□ -0.22
HIF3A-203ENST00000291300 SRSF3P84103 164 aaKnown RBP13.7□□□□□ -0.22
HIF3A-203ENST00000291300 PRB3Q04118 309 aaPredicted RBP13.7□□□□□ -0.22
HIF3A-203ENST00000291300 MEF2CQ06413 473 aaPredicted RBP13.7□□□□□ -0.22
HIF3A-203ENST00000291300 C11orf71Q6IPW1 123 aa13.7□□□□□ -0.22
HIF3A-203ENST00000291300 SLC25A48Q6ZT89 311 aaKnown RBP13.7□□□□□ -0.22
HIF3A-203ENST00000291300 H2BFWTQ7Z2G1 175 aa13.7□□□□□ -0.22
HIF3A-203ENST00000291300 HSD17B13Q7Z5P4 300 aaPredicted RBP13.7□□□□□ -0.22
HIF3A-203ENST00000291300 RAB40CQ96S21 281 aa13.7□□□□□ -0.22
HIF3A-203ENST00000291300 COA4Q9NYJ1 87 aa13.7□□□□□ -0.22
HIF3A-203ENST00000291300 TAS2R3Q9NYW6 316 aa13.7□□□□□ -0.22
HIF3A-203ENST00000291300 KAAG1Q9UBP8 84 aa13.7□□□□□ -0.22
HIF3A-203ENST00000291300 CACNA1BQ00975 2339 aa13.7□□□□□ -0.22
HIF3A-203ENST00000291300 MALRD1Q5VYJ5 2156 aa13.7□□□□□ -0.22
HIF3A-203ENST00000291300 COL12A1Q99715 3063 aa13.7□□□□□ -0.22
HIF3A-203ENST00000291300 SCO1O75880 301 aa13.69□□□□□ -0.22
HIF3A-203ENST00000291300 SPP1P10451 314 aa13.69□□□□□ -0.22
HIF3A-203ENST00000291300 RAB7AP51149 207 aa13.69□□□□□ -0.22
HIF3A-203ENST00000291300 DLX6P56179 175 aa13.69□□□□□ -0.22
HIF3A-203ENST00000291300 EIF5AP63241 154 aaKnown RBP13.69□□□□□ -0.22
HIF3A-203ENST00000291300 PXDC1Q5TGL8 231 aa13.69□□□□□ -0.22
HIF3A-203ENST00000291300 QTRT1Q9BXR0 403 aaKnown RBP13.69□□□□□ -0.22
HIF3A-203ENST00000291300 FAM212BQ9NTI7 297 aaPredicted RBP13.69□□□□□ -0.22
HIF3A-203ENST00000291300 HSPB7Q9UBY9 170 aa13.69□□□□□ -0.22
HIF3A-203ENST00000291300 WSB1Q9Y6I7 421 aa13.69□□□□□ -0.22
HIF3A-203ENST00000291300 BORCS7-ASMTA0A0B4J1R7 106 aa13.69□□□□□ -0.22
HIF3A-203ENST00000291300 PIGBOS1A0A0B4J2F0 54 aa13.69□□□□□ -0.22
HIF3A-203ENST00000291300 RAB29O14966 203 aa13.69□□□□□ -0.22
HIF3A-203ENST00000291300 IGHV2-70P01814 119 aa13.69□□□□□ -0.22
HIF3A-203ENST00000291300 RPS16P62249 146 aaKnown RBP13.69□□□□□ -0.22
HIF3A-203ENST00000291300 RUNX1Q01196 453 aa13.69□□□□□ -0.22
HIF3A-203ENST00000291300 TAGLNQ01995 201 aaKnown RBP13.69□□□□□ -0.22
HIF3A-203ENST00000291300 AKR1C1Q04828 323 aa13.69□□□□□ -0.22
HIF3A-203ENST00000291300 SPANXN5Q5MJ07 72 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms