RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 RNASEH2CQ8TDP1 164 aaKnown RBP11.1□□□□□ -0.63
SLC28A1-201ENST00000286749 FOXJ2Q9P0K8 574 aa11.1□□□□□ -0.63
SLC28A1-201ENST00000286749 TMEM30CPA0ZSE6 113 aa11.1□□□□□ -0.63
SLC28A1-201ENST00000286749 C9orf172C9J069 976 aa11.1□□□□□ -0.63
SLC28A1-201ENST00000286749 TFF1P04155 84 aa11.1□□□□□ -0.63
SLC28A1-201ENST00000286749 ACP1P24666 158 aa11.1□□□□□ -0.63
SLC28A1-201ENST00000286749 MEOX1P50221 254 aa11.1□□□□□ -0.63
SLC28A1-201ENST00000286749 EIF4EBP1Q13541 118 aaPredicted RBP11.1□□□□□ -0.63
SLC28A1-201ENST00000286749 LPAL2Q16609 132 aa11.1□□□□□ -0.63
SLC28A1-201ENST00000286749 TMEM37Q8WXS4 190 aa11.1□□□□□ -0.63
SLC28A1-201ENST00000286749 NEIL1Q96FI4 390 aaPredicted RBP11.1□□□□□ -0.63
SLC28A1-201ENST00000286749 FUT9Q9Y231 359 aa11.1□□□□□ -0.63
SLC28A1-201ENST00000286749 C1QTNF9BB2RNN3 333 aa11.09□□□□□ -0.63
SLC28A1-201ENST00000286749 WNT9BO14905 357 aa11.09□□□□□ -0.63
SLC28A1-201ENST00000286749 RBMXL2O75526 392 aaKnown RBP11.09□□□□□ -0.63
SLC28A1-201ENST00000286749 RNF224P0DH78 156 aa11.09□□□□□ -0.63
SLC28A1-201ENST00000286749 FAM3BP58499 235 aaPredicted RBP11.09□□□□□ -0.63
SLC28A1-201ENST00000286749 AESQ08117 197 aa11.09□□□□□ -0.63
SLC28A1-201ENST00000286749 CATR1Q13166 79 aa11.09□□□□□ -0.63
SLC28A1-201ENST00000286749 COA6Q5JTJ3 125 aaKnown RBP11.09□□□□□ -0.63
SLC28A1-201ENST00000286749 DCAF10Q5QP82 559 aa11.09□□□□□ -0.63
SLC28A1-201ENST00000286749 CXorf67Q86X51 503 aaPredicted RBP11.09□□□□□ -0.63
SLC28A1-201ENST00000286749 ZNF709Q8N972 641 aa11.09□□□□□ -0.63
SLC28A1-201ENST00000286749 ZBTB34Q8NCN2 500 aa11.09□□□□□ -0.63
SLC28A1-201ENST00000286749 OR2T10Q8NGZ9 312 aa11.09□□□□□ -0.63
SLC28A1-201ENST00000286749 TMEM170AQ8WVE7 144 aa11.09□□□□□ -0.63
SLC28A1-201ENST00000286749 ANAPC16Q96DE5 110 aa11.09□□□□□ -0.63
SLC28A1-201ENST00000286749 HBZP02008 142 aa11.09□□□□□ -0.63
SLC28A1-201ENST00000286749 BMP5P22003 454 aa11.09□□□□□ -0.63
SLC28A1-201ENST00000286749 NUBP1P53384 320 aa11.09□□□□□ -0.63
SLC28A1-201ENST00000286749 LINC00205P59089 165 aa11.09□□□□□ -0.63
SLC28A1-201ENST00000286749 PRSS8Q16651 343 aa11.09□□□□□ -0.63
SLC28A1-201ENST00000286749 SLC25A40Q8TBP6 338 aa11.09□□□□□ -0.63
SLC28A1-201ENST00000286749 IER2Q9BTL4 223 aa11.09□□□□□ -0.63
SLC28A1-201ENST00000286749 SPRY4Q9C004 299 aa11.09□□□□□ -0.63
SLC28A1-201ENST00000286749 GALR2O43603 387 aaPredicted RBP11.08□□□□□ -0.64
SLC28A1-201ENST00000286749 PAX1P15863 534 aa11.08□□□□□ -0.64
SLC28A1-201ENST00000286749 NPPCP23582 126 aa11.08□□□□□ -0.64
SLC28A1-201ENST00000286749 CHRNA7P36544 502 aa11.08□□□□□ -0.64
SLC28A1-201ENST00000286749 ACTL10Q5JWF8 245 aa11.08□□□□□ -0.64
SLC28A1-201ENST00000286749 ZNF826PQ6ZT77 177 aa11.08□□□□□ -0.64
SLC28A1-201ENST00000286749 H2BFWTQ7Z2G1 175 aa11.08□□□□□ -0.64
SLC28A1-201ENST00000286749 ZPBPQ9BS86 351 aa11.08□□□□□ -0.64
SLC28A1-201ENST00000286749 DEFB127Q9H1M4 99 aa11.08□□□□□ -0.64
SLC28A1-201ENST00000286749 ZNF705GA8MUZ8 300 aaPredicted RBP11.08□□□□□ -0.64
SLC28A1-201ENST00000286749 C11orf94C9JXX5 98 aa11.08□□□□□ -0.64
SLC28A1-201ENST00000286749 MKRN2OSH3BPM6 223 aa11.08□□□□□ -0.64
SLC28A1-201ENST00000286749 LAMTOR5O43504 91 aa11.08□□□□□ -0.64
SLC28A1-201ENST00000286749 GGCTO75223 188 aaKnown RBP11.08□□□□□ -0.64
SLC28A1-201ENST00000286749 CLDN14O95500 239 aa11.08□□□□□ -0.64
SLC28A1-201ENST00000286749 ZNF766Q5HY98 468 aa11.08□□□□□ -0.64
SLC28A1-201ENST00000286749 UBALD2Q8IYN6 164 aa11.08□□□□□ -0.64
SLC28A1-201ENST00000286749 MRGPRDQ8TDS7 321 aa11.08□□□□□ -0.64
SLC28A1-201ENST00000286749 NINJ1Q92982 152 aa11.08□□□□□ -0.64
SLC28A1-201ENST00000286749 ACY3Q96HD9 319 aa11.08□□□□□ -0.64
SLC28A1-201ENST00000286749 MRPL37Q9BZE1 423 aaKnown RBP11.08□□□□□ -0.64
SLC28A1-201ENST00000286749 PTPRBP23467 1997 aa11.08□□□□□ -0.64
SLC28A1-201ENST00000286749 HCFC1P51610 2035 aa11.08□□□□□ -0.64
SLC28A1-201ENST00000286749 WDFY4Q6ZS81 3184 aa11.08□□□□□ -0.64
SLC28A1-201ENST00000286749 OOEPA6NGQ2 149 aa11.07□□□□□ -0.64
SLC28A1-201ENST00000286749 CRYAAP02489 173 aa11.07□□□□□ -0.64
SLC28A1-201ENST00000286749 EGR1P18146 543 aa11.07□□□□□ -0.64
SLC28A1-201ENST00000286749 CDC34P49427 236 aaPredicted RBP11.07□□□□□ -0.64
SLC28A1-201ENST00000286749 PSG7Q13046 419 aa11.07□□□□□ -0.64
SLC28A1-201ENST00000286749 FIP1L1Q6UN15 594 aaKnown RBP11.07□□□□□ -0.64
SLC28A1-201ENST00000286749 ZNF664Q8N3J9 261 aa11.07□□□□□ -0.64
SLC28A1-201ENST00000286749 AURKAIP1Q9NWT8 199 aaPredicted RBP11.07□□□□□ -0.64
SLC28A1-201ENST00000286749 IGHV3-43A0A0B4J1X8 118 aa11.07□□□□□ -0.64
SLC28A1-201ENST00000286749 RAB29O14966 203 aa11.07□□□□□ -0.64
SLC28A1-201ENST00000286749 SP1P08047 785 aa11.07□□□□□ -0.64
SLC28A1-201ENST00000286749 IGHV3-43DP0DP04 118 aa11.07□□□□□ -0.64
SLC28A1-201ENST00000286749 MPLP40238 635 aa11.07□□□□□ -0.64
SLC28A1-201ENST00000286749 GABRA2P47869 451 aa11.07□□□□□ -0.64
SLC28A1-201ENST00000286749 PDLIM4P50479 330 aa11.07□□□□□ -0.64
SLC28A1-201ENST00000286749 MRPL49Q13405 166 aaKnown RBP11.07□□□□□ -0.64
SLC28A1-201ENST00000286749 VWC2Q2TAL6 325 aa11.07□□□□□ -0.64
SLC28A1-201ENST00000286749 GCSAMLQ5JQS6 135 aa11.07□□□□□ -0.64
SLC28A1-201ENST00000286749 Q6ZR03 302 aa11.07□□□□□ -0.64
SLC28A1-201ENST00000286749 COQ2Q96H96 371 aa11.07□□□□□ -0.64
SLC28A1-201ENST00000286749 CIB3Q96Q77 187 aaPredicted RBP11.07□□□□□ -0.64
SLC28A1-201ENST00000286749 OR6C3Q9NZP0 311 aa11.07□□□□□ -0.64
SLC28A1-201ENST00000286749 LINC00473A8K010 186 aa11.06□□□□□ -0.64
SLC28A1-201ENST00000286749 C17orf112F2Z3M2 114 aa11.06□□□□□ -0.64
SLC28A1-201ENST00000286749 VENTXO95231 258 aa11.06□□□□□ -0.64
SLC28A1-201ENST00000286749 SRP14P37108 136 aaKnown RBP11.06□□□□□ -0.64
SLC28A1-201ENST00000286749 MPV17P39210 176 aa11.06□□□□□ -0.64
SLC28A1-201ENST00000286749 UBE2G2P60604 165 aa11.06□□□□□ -0.64
SLC28A1-201ENST00000286749 GNB2P62879 340 aa11.06□□□□□ -0.64
SLC28A1-201ENST00000286749 SLC10A1Q14973 349 aa11.06□□□□□ -0.64
SLC28A1-201ENST00000286749 SLC35E4Q6ICL7 350 aa11.06□□□□□ -0.64
SLC28A1-201ENST00000286749 TPRX1Q8N7U7 411 aa11.06□□□□□ -0.64
SLC28A1-201ENST00000286749 DDA1Q9BW61 102 aa11.06□□□□□ -0.64
SLC28A1-201ENST00000286749 HES4Q9HCC6 221 aa11.06□□□□□ -0.64
SLC28A1-201ENST00000286749 OBP2BQ9NPH6 170 aa11.06□□□□□ -0.64
SLC28A1-201ENST00000286749 TRAV38-1A0A0B4J264 116 aa11.06□□□□□ -0.64
SLC28A1-201ENST00000286749 A0A1W2PNU3 283 aaPredicted RBP11.06□□□□□ -0.64
SLC28A1-201ENST00000286749 A8MWP6 167 aa11.06□□□□□ -0.64
SLC28A1-201ENST00000286749 SLC31A2O15432 143 aa11.06□□□□□ -0.64
SLC28A1-201ENST00000286749 NDUFB7P17568 137 aa11.06□□□□□ -0.64
SLC28A1-201ENST00000286749 SSTR5P35346 364 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms