RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 C1orf210Q8IVY1 113 aa14.18□□□□□ -0.14
SH3RF1-201ENST00000284637 TMEM250H0YL14 139 aa14.18□□□□□ -0.14
SH3RF1-201ENST00000284637 THY1P04216 161 aa14.18□□□□□ -0.14
SH3RF1-201ENST00000284637 RPS11P62280 158 aaKnown RBP eCLIP14.18□□□□□ -0.14
SH3RF1-201ENST00000284637 MIC13Q5XKP0 118 aa14.18□□□□□ -0.14
SH3RF1-201ENST00000284637 HEPN1Q6WQI6 88 aa14.18□□□□□ -0.14
SH3RF1-201ENST00000284637 PRNTQ86SH4 94 aa14.18□□□□□ -0.14
SH3RF1-201ENST00000284637 SELENOHQ8IZQ5 122 aaKnown RBP14.18□□□□□ -0.14
SH3RF1-201ENST00000284637 OR10S1Q8NGN2 331 aa14.18□□□□□ -0.14
SH3RF1-201ENST00000284637 OR2H2O95918 312 aa14.18□□□□□ -0.14
SH3RF1-201ENST00000284637 PLAUP00749 431 aa14.18□□□□□ -0.14
SH3RF1-201ENST00000284637 IL9P15248 144 aa14.18□□□□□ -0.14
SH3RF1-201ENST00000284637 CACNA1DQ01668 2161 aa14.18□□□□□ -0.14
SH3RF1-201ENST00000284637 Q5PR19 223 aa14.18□□□□□ -0.14
SH3RF1-201ENST00000284637 OR1L1Q8NH94 360 aa14.18□□□□□ -0.14
SH3RF1-201ENST00000284637 C14orf144Q96I85 54 aa14.18□□□□□ -0.14
SH3RF1-201ENST00000284637 A0A1B0GTI1 187 aa14.17□□□□□ -0.14
SH3RF1-201ENST00000284637 DPRXA6NFQ7 191 aa14.17□□□□□ -0.14
SH3RF1-201ENST00000284637 FHL5Q5TD97 284 aa14.17□□□□□ -0.14
SH3RF1-201ENST00000284637 INO80CQ6PI98 192 aaPredicted RBP14.17□□□□□ -0.14
SH3RF1-201ENST00000284637 DOLPP1Q86YN1 238 aa14.17□□□□□ -0.14
SH3RF1-201ENST00000284637 TMUB1Q9BVT8 246 aa14.17□□□□□ -0.14
SH3RF1-201ENST00000284637 NDUFS8O00217 210 aa14.17□□□□□ -0.14
SH3RF1-201ENST00000284637 SNCGO76070 127 aa14.17□□□□□ -0.14
SH3RF1-201ENST00000284637 NMUP48645 174 aa14.17□□□□□ -0.14
SH3RF1-201ENST00000284637 PYY3Q5JQD4 70 aa14.17□□□□□ -0.14
SH3RF1-201ENST00000284637 NR2C2APQ86WQ0 139 aa14.17□□□□□ -0.14
SH3RF1-201ENST00000284637 C1QL4Q86Z23 238 aa14.17□□□□□ -0.14
SH3RF1-201ENST00000284637 WDR54Q9H977 334 aa14.17□□□□□ -0.14
SH3RF1-201ENST00000284637 RAMP1O60894 148 aa14.17□□□□□ -0.14
SH3RF1-201ENST00000284637 NPIPB7O75200 414 aa14.17□□□□□ -0.14
SH3RF1-201ENST00000284637 LGALS7P47929 136 aa14.17□□□□□ -0.14
SH3RF1-201ENST00000284637 IBA57Q5T440 356 aaKnown RBP14.17□□□□□ -0.14
SH3RF1-201ENST00000284637 MAFAQ8NHW3 353 aaPredicted RBP14.17□□□□□ -0.14
SH3RF1-201ENST00000284637 AP5S1Q9NUS5 200 aa14.17□□□□□ -0.14
SH3RF1-201ENST00000284637 F8VVB4 439 aa14.17□□□□□ -0.14
SH3RF1-201ENST00000284637 F8VWA3 439 aa14.17□□□□□ -0.14
SH3RF1-201ENST00000284637 TRIP6Q15654 476 aaKnown RBP14.17□□□□□ -0.14
SH3RF1-201ENST00000284637 ZNF826PQ6ZT77 177 aa14.17□□□□□ -0.14
SH3RF1-201ENST00000284637 BIVMQ86UB2 503 aa14.17□□□□□ -0.14
SH3RF1-201ENST00000284637 RAB1CQ92928 201 aa14.17□□□□□ -0.14
SH3RF1-201ENST00000284637 SNRNP40Q96DI7 357 aaKnown RBP14.17□□□□□ -0.14
SH3RF1-201ENST00000284637 LAMTOR2Q9Y2Q5 125 aa14.17□□□□□ -0.14
SH3RF1-201ENST00000284637 DCAF10Q5QP82 559 aa14.16□□□□□ -0.14
SH3RF1-201ENST00000284637 HIST1H2BLQ99880 126 aa14.16□□□□□ -0.14
SH3RF1-201ENST00000284637 ZIC3O60481 467 aa14.16□□□□□ -0.14
SH3RF1-201ENST00000284637 HIST3H2BBQ8N257 126 aa14.16□□□□□ -0.14
SH3RF1-201ENST00000284637 C5orf67F2Z3F1 127 aa14.16□□□□□ -0.14
SH3RF1-201ENST00000284637 RPL31P62899 125 aaKnown RBP14.16□□□□□ -0.14
SH3RF1-201ENST00000284637 CTHRC1Q96CG8 243 aa14.16□□□□□ -0.14
SH3RF1-201ENST00000284637 CDC42EP3Q9UKI2 254 aa14.16□□□□□ -0.14
SH3RF1-201ENST00000284637 MDC1Q14676 2089 aaKnown RBP14.16□□□□□ -0.14
SH3RF1-201ENST00000284637 OR4C46A6NHA9 309 aa14.16□□□□□ -0.14
SH3RF1-201ENST00000284637 CEBPDP49716 269 aaPredicted RBP14.16□□□□□ -0.14
SH3RF1-201ENST00000284637 DGAT2L7PQ6IED9 249 aa14.16□□□□□ -0.14
SH3RF1-201ENST00000284637 TTTY12Q9BZ98 90 aa14.16□□□□□ -0.14
SH3RF1-201ENST00000284637 SCN2AQ99250 2005 aa14.15□□□□□ -0.14
SH3RF1-201ENST00000284637 TRBV9A0A0B4J1U6 114 aa14.15□□□□□ -0.14
SH3RF1-201ENST00000284637 SH2D7A6NKC9 451 aaPredicted RBP14.15□□□□□ -0.14
SH3RF1-201ENST00000284637 M0R296 226 aa14.15□□□□□ -0.14
SH3RF1-201ENST00000284637 RELBQ01201 579 aa14.15□□□□□ -0.14
SH3RF1-201ENST00000284637 GBGT1Q8N5D6 347 aa14.15□□□□□ -0.14
SH3RF1-201ENST00000284637 WBP1LQ9NX94 342 aa14.15□□□□□ -0.14
SH3RF1-201ENST00000284637 LEPROTL1O95214 131 aa14.15□□□□□ -0.14
SH3RF1-201ENST00000284637 CD3EP07766 207 aa14.15□□□□□ -0.14
SH3RF1-201ENST00000284637 KIAA1644Q3SXP7 199 aa14.15□□□□□ -0.14
SH3RF1-201ENST00000284637 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.15□□□□□ -0.14
SH3RF1-201ENST00000284637 WDR31Q8NA23 367 aa14.15□□□□□ -0.14
SH3RF1-201ENST00000284637 NUDT16L1Q9BRJ7 211 aaKnown RBP14.15□□□□□ -0.14
SH3RF1-201ENST00000284637 TMEM208Q9BTX3 173 aa14.15□□□□□ -0.14
SH3RF1-201ENST00000284637 PIKFYVEQ9Y2I7 2098 aa14.15□□□□□ -0.14
SH3RF1-201ENST00000284637 TMEM14DPA8MWL7 114 aa14.15□□□□□ -0.14
SH3RF1-201ENST00000284637 BMI1P35226 326 aa14.15□□□□□ -0.14
SH3RF1-201ENST00000284637 LY6G6FQ5SQ64 297 aa14.15□□□□□ -0.14
SH3RF1-201ENST00000284637 VENTXO95231 258 aa14.15□□□□□ -0.14
SH3RF1-201ENST00000284637 EGR4Q05215 589 aa14.15□□□□□ -0.14
SH3RF1-201ENST00000284637 FXYD3Q14802 87 aa14.15□□□□□ -0.14
SH3RF1-201ENST00000284637 Q96M66 194 aa14.15□□□□□ -0.14
SH3RF1-201ENST00000284637 DICER1Q9UPY3 1922 aaKnown RBP14.15□□□□□ -0.14
SH3RF1-201ENST00000284637 LOC101059948A0A1B0GTJ6 334 aa14.14□□□□□ -0.15
SH3RF1-201ENST00000284637 SMIM10L1P0DMW3 83 aa14.14□□□□□ -0.15
SH3RF1-201ENST00000284637 SMIM10Q96HG1 83 aa14.14□□□□□ -0.15
SH3RF1-201ENST00000284637 SLC25A33Q9BSK2 321 aa14.14□□□□□ -0.15
SH3RF1-201ENST00000284637 A8MWL6 223 aa14.14□□□□□ -0.15
SH3RF1-201ENST00000284637 HYPMO75409 117 aa14.14□□□□□ -0.15
SH3RF1-201ENST00000284637 LINC00869P0C866 280 aa14.14□□□□□ -0.15
SH3RF1-201ENST00000284637 HTN1P15515 57 aa14.14□□□□□ -0.15
SH3RF1-201ENST00000284637 CCL8P80075 99 aa14.14□□□□□ -0.15
SH3RF1-201ENST00000284637 MMDQ15546 238 aa14.14□□□□□ -0.15
SH3RF1-201ENST00000284637 PQLC2Q6ZP29 291 aa14.14□□□□□ -0.15
SH3RF1-201ENST00000284637 CYP2G1PQ6ZSU1 146 aa14.14□□□□□ -0.15
SH3RF1-201ENST00000284637 NFAM1Q8NET5 270 aaPredicted RBP14.14□□□□□ -0.15
SH3RF1-201ENST00000284637 MPDU1O75352 247 aa14.14□□□□□ -0.15
SH3RF1-201ENST00000284637 MGPP08493 103 aa14.14□□□□□ -0.15
SH3RF1-201ENST00000284637 ATOH7Q8N100 152 aa14.14□□□□□ -0.15
SH3RF1-201ENST00000284637 CRISPLD2Q9H0B8 497 aa14.14□□□□□ -0.15
SH3RF1-201ENST00000284637 ZNFX1Q9P2E3 1918 aaKnown RBP14.14□□□□□ -0.15
SH3RF1-201ENST00000284637 TMEM187Q14656 261 aa14.14□□□□□ -0.15
SH3RF1-201ENST00000284637 RAB1BQ9H0U4 201 aa14.14□□□□□ -0.15
SH3RF1-201ENST00000284637 DLL3Q9NYJ7 618 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms