RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 MIOXQ9UGB7 285 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 PROCRQ9UNN8 238 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 MDC1Q14676 2089 aaKnown RBP2.44□□□□□ -2.02
HERC4-201ENST00000277817 IGHV3-43A0A0B4J1X8 118 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 LRRC30A6NM36 301 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 CDIPTO14735 213 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 CHEK1O14757 476 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 ARG1P05089 322 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 PGA3P0DJD8 388 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 IGHV3-43DP0DP04 118 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 LIFP15018 202 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 MAGEA5P43359 124 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 H2BFSP57053 126 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 HERV-K104P63124 156 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 SPINK9Q5DT21 86 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 FAHD2BQ6P2I3 314 aaPredicted RBP2.44□□□□□ -2.02
HERC4-201ENST00000277817 UNQ9370/PRO34162Q6UXP9 181 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 HSD17B13Q7Z5P4 300 aaPredicted RBP2.44□□□□□ -2.02
HERC4-201ENST00000277817 NR2C2APQ86WQ0 139 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 CBLN2Q8IUK8 224 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 OR5R1Q8NH85 324 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 M1APQ8TC57 530 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 CT55Q8WUE5 264 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 ISOC2Q96AB3 205 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 PINX1Q96BK5 328 aaKnown RBP2.44□□□□□ -2.02
HERC4-201ENST00000277817 PHYHIPLQ96FC7 376 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 FAHD2AQ96GK7 314 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 TECTBQ96PL2 329 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 GPX7Q96SL4 187 aaPredicted RBP2.44□□□□□ -2.02
HERC4-201ENST00000277817 S1PR3Q99500 378 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 ACTR3CQ9C0K3 210 aaPredicted RBP2.44□□□□□ -2.02
HERC4-201ENST00000277817 SHARPINQ9H0F6 387 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 CYB5R1Q9UHQ9 305 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 TINAGQ9UJW2 476 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 AMDHD2Q9Y303 409 aa2.44□□□□□ -2.02
HERC4-201ENST00000277817 MED12Q93074 2177 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 IGLV1-36A0A0B4J1U3 117 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 UBE2L5PA0A1B0GUS4 154 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 PRR32B1ATL7 298 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 PRSS44E7EML9 344 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 CTSDP07339 412 aaPredicted RBP2.43□□□□□ -2.02
HERC4-201ENST00000277817 FGF2P09038 288 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 SLC25A4P12235 298 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 SLC25A6P12236 298 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 DEFA4P12838 97 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 CTRB1P17538 263 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 COX5AP20674 150 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 ZBTB25P24278 435 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 LPAR6P43657 344 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 ZNF83P51522 516 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 FGF8P55075 233 aaPredicted RBP2.43□□□□□ -2.02
HERC4-201ENST00000277817 PLP1P60201 277 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 TMEM255AQ5JRV8 349 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 ARTNQ5T4W7 220 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 CTRB2Q6GPI1 263 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 GAPTQ8N292 157 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 RGP1Q92546 391 aaPredicted RBP2.43□□□□□ -2.02
HERC4-201ENST00000277817 AP1S3Q96PC3 154 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 ADAT1Q9BUB4 502 aaKnown RBP2.43□□□□□ -2.02
HERC4-201ENST00000277817 NMES1Q9C002 83 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 ALX4Q9H161 411 aaPredicted RBP2.43□□□□□ -2.02
HERC4-201ENST00000277817 CCL28Q9NRJ3 127 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 SLC2A9Q9NRM0 540 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 CACNG5Q9UF02 275 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 ZNF391Q9UJN7 358 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 PSG11Q9UQ72 335 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 WSB1Q9Y6I7 421 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 V9GYS6 101 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 USP34Q70CQ2 3546 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 KRTAP23-1A1A580 65 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 F5H697 171 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 MKRN2OSH3BPM6 223 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 M0R1X1 148 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 PRRG2O14669 202 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 CNIH1O95406 144 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 PPYP01298 95 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 NMBP08949 121 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 RAB4AP20338 218 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 BCL3P20749 454 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 FGF7P21781 194 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 ZP4Q12836 540 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 ENDOGQ14249 297 aaKnown RBP2.43□□□□□ -2.02
HERC4-201ENST00000277817 HES1Q14469 280 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 ZNF260Q3ZCT1 412 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 ZNF660Q6AZW8 331 aaPredicted RBP2.43□□□□□ -2.02
HERC4-201ENST00000277817 SLC25A48Q6ZT89 311 aaKnown RBP2.43□□□□□ -2.02
HERC4-201ENST00000277817 PIP4P1Q86T03 277 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 HOGA1Q86XE5 327 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 C17orf78Q8N4C9 275 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 C15orf54Q8N8G6 183 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 MRGPRDQ8TDS7 321 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 SSMEM1Q8WWF3 244 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 BORCS7Q96B45 105 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 MRPS24Q96EL2 167 aaKnown RBP2.43□□□□□ -2.02
HERC4-201ENST00000277817 ZNF488Q96MN9 340 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 ZNF426Q9BUY5 554 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 OR2H1Q9GZK4 316 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 LPAR5Q9H1C0 372 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 SLC35B3Q9H1N7 401 aa2.43□□□□□ -2.02
HERC4-201ENST00000277817 SLC7A10Q9NS82 523 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms