RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 TPPP2P59282 170 aa9.63□□□□□ -0.87
USP6NL-201ENST00000277575 ACSF3Q4G176 576 aaPredicted RBP9.63□□□□□ -0.87
USP6NL-201ENST00000277575 HCP5Q6MZN7 132 aa9.63□□□□□ -0.87
USP6NL-201ENST00000277575 C1orf162Q8NEQ5 155 aaPredicted RBP9.63□□□□□ -0.87
USP6NL-201ENST00000277575 MRPL30Q8TCC3 161 aaKnown RBP9.63□□□□□ -0.87
USP6NL-201ENST00000277575 GPR146Q96CH1 333 aa9.63□□□□□ -0.87
USP6NL-201ENST00000277575 STARD4Q96DR4 205 aa9.63□□□□□ -0.87
USP6NL-201ENST00000277575 MRPL13Q9BYD1 178 aaKnown RBP9.63□□□□□ -0.87
USP6NL-201ENST00000277575 DEPPQ9NTK1 212 aa9.63□□□□□ -0.87
USP6NL-201ENST00000277575 NEUROG3Q9Y4Z2 214 aa9.63□□□□□ -0.87
USP6NL-201ENST00000277575 CD40P25942 277 aa9.63□□□□□ -0.87
USP6NL-201ENST00000277575 COL8A1P27658 744 aa9.63□□□□□ -0.87
USP6NL-201ENST00000277575 OR10J1P30954 320 aa9.63□□□□□ -0.87
USP6NL-201ENST00000277575 FAM57AQ8TBR7 257 aa9.63□□□□□ -0.87
USP6NL-201ENST00000277575 WDYHV1Q96HA8 205 aa9.63□□□□□ -0.87
USP6NL-201ENST00000277575 METTL1Q9UBP6 276 aaKnown RBP9.63□□□□□ -0.87
USP6NL-201ENST00000277575 SMPD2O60906 423 aa9.63□□□□□ -0.87
USP6NL-201ENST00000277575 DEDDO75618 318 aa9.63□□□□□ -0.87
USP6NL-201ENST00000277575 CXorf1O96002 111 aa9.63□□□□□ -0.87
USP6NL-201ENST00000277575 WNT5AP41221 380 aa9.63□□□□□ -0.87
USP6NL-201ENST00000277575 ERVS71-1P61550 626 aa9.63□□□□□ -0.87
USP6NL-201ENST00000277575 ABHD12Q8N2K0 398 aa9.63□□□□□ -0.87
USP6NL-201ENST00000277575 STPG2Q8N412 459 aa9.63□□□□□ -0.87
USP6NL-201ENST00000277575 OR9G1Q8NH87 305 aa9.63□□□□□ -0.87
USP6NL-201ENST00000277575 MIOXQ9UGB7 285 aa9.63□□□□□ -0.87
USP6NL-201ENST00000277575 SBF1O95248 1867 aa9.63□□□□□ -0.87
USP6NL-201ENST00000277575 C7orf77A4D0Y5 90 aa9.63□□□□□ -0.87
USP6NL-201ENST00000277575 HYPMO75409 117 aa9.63□□□□□ -0.87
USP6NL-201ENST00000277575 LHX2P50458 406 aa9.63□□□□□ -0.87
USP6NL-201ENST00000277575 C11orf42Q8N5U0 333 aa9.63□□□□□ -0.87
USP6NL-201ENST00000277575 C9orf106Q8NAJ2 232 aa9.63□□□□□ -0.87
USP6NL-201ENST00000277575 PRSS3P2Q8NHM4 247 aa9.63□□□□□ -0.87
USP6NL-201ENST00000277575 ISOC2Q96AB3 205 aa9.63□□□□□ -0.87
USP6NL-201ENST00000277575 MEGF10Q96KG7 1140 aa9.63□□□□□ -0.87
USP6NL-201ENST00000277575 OR10C1Q96KK4 312 aa9.63□□□□□ -0.87
USP6NL-201ENST00000277575 RSG1Q9BU20 258 aa9.63□□□□□ -0.87
USP6NL-201ENST00000277575 REPIN1Q9BWE0 567 aaKnown RBP9.63□□□□□ -0.87
USP6NL-201ENST00000277575 CHODLQ9H9P2 273 aa9.63□□□□□ -0.87
USP6NL-201ENST00000277575 RABAC1Q9UI14 185 aa9.63□□□□□ -0.87
USP6NL-201ENST00000277575 YTHDF2Q9Y5A9 579 aaKnown RBP9.63□□□□□ -0.87
USP6NL-201ENST00000277575 HELTA6NFD8 242 aa9.62□□□□□ -0.87
USP6NL-201ENST00000277575 ZNF729A6NN14 1252 aaPredicted RBP9.62□□□□□ -0.87
USP6NL-201ENST00000277575 CEACAM18A8MTB9 384 aa9.62□□□□□ -0.87
USP6NL-201ENST00000277575 LEUTXA8MZ59 168 aa9.62□□□□□ -0.87
USP6NL-201ENST00000277575 CD74P04233 296 aa9.62□□□□□ -0.87
USP6NL-201ENST00000277575 APOBEC3AP31941 199 aaPredicted RBP9.62□□□□□ -0.87
USP6NL-201ENST00000277575 SSTR5P35346 364 aa9.62□□□□□ -0.87
USP6NL-201ENST00000277575 NUBP1P53384 320 aa9.62□□□□□ -0.87
USP6NL-201ENST00000277575 CLDN18P56856 261 aa9.62□□□□□ -0.87
USP6NL-201ENST00000277575 SUMO1P63165 101 aaKnown RBP9.62□□□□□ -0.87
USP6NL-201ENST00000277575 RPEL1Q2QD12 228 aa9.62□□□□□ -0.87
USP6NL-201ENST00000277575 LILRB1Q8NHL6 650 aaPredicted RBP9.62□□□□□ -0.87
USP6NL-201ENST00000277575 GOLT1BQ9Y3E0 138 aa9.62□□□□□ -0.87
USP6NL-201ENST00000277575 FAM208BQ5VWN6 2430 aa9.62□□□□□ -0.87
USP6NL-201ENST00000277575 IGLV3-32A0A0A0MS00 114 aa9.62□□□□□ -0.87
USP6NL-201ENST00000277575 MARCH11A6NNE9 402 aa9.62□□□□□ -0.87
USP6NL-201ENST00000277575 MUC1P15941 1255 aaPredicted RBP9.62□□□□□ -0.87
USP6NL-201ENST00000277575 KLK2P20151 261 aa9.62□□□□□ -0.87
USP6NL-201ENST00000277575 HSPE1P61604 102 aaKnown RBP9.62□□□□□ -0.87
USP6NL-201ENST00000277575 PSG7Q13046 419 aa9.62□□□□□ -0.87
USP6NL-201ENST00000277575 ASPHD2Q6ICH7 369 aa9.62□□□□□ -0.87
USP6NL-201ENST00000277575 CALHM1Q8IU99 346 aa9.62□□□□□ -0.87
USP6NL-201ENST00000277575 SRD5A3Q9H8P0 318 aa9.62□□□□□ -0.87
USP6NL-201ENST00000277575 TMEM140Q9NV12 185 aa9.62□□□□□ -0.87
USP6NL-201ENST00000277575 NOTCH2Q04721 2471 aa9.62□□□□□ -0.87
USP6NL-201ENST00000277575 A0A1B0GTI1 187 aa9.62□□□□□ -0.87
USP6NL-201ENST00000277575 MPDU1O75352 247 aa9.62□□□□□ -0.87
USP6NL-201ENST00000277575 SNRPCP09234 159 aaKnown RBP9.62□□□□□ -0.87
USP6NL-201ENST00000277575 IGHV1-2P23083 117 aa9.62□□□□□ -0.87
USP6NL-201ENST00000277575 RNASEKQ6P5S7 137 aaKnown RBP9.62□□□□□ -0.87
USP6NL-201ENST00000277575 C1QTNF5Q9BXJ0 243 aa9.62□□□□□ -0.87
USP6NL-201ENST00000277575 SEC11CQ9BY50 192 aa9.62□□□□□ -0.87
USP6NL-201ENST00000277575 TOLLIPQ9H0E2 274 aa9.62□□□□□ -0.87
USP6NL-201ENST00000277575 PXMP4Q9Y6I8 212 aa9.62□□□□□ -0.87
USP6NL-201ENST00000277575 RHBDL1O75783 438 aa9.61□□□□□ -0.87
USP6NL-201ENST00000277575 NEURL1O76050 574 aa9.61□□□□□ -0.87
USP6NL-201ENST00000277575 GFRA1P56159 465 aa9.61□□□□□ -0.87
USP6NL-201ENST00000277575 SELENOTP62341 195 aa9.61□□□□□ -0.87
USP6NL-201ENST00000277575 RANP62826 216 aaKnown RBP9.61□□□□□ -0.87
USP6NL-201ENST00000277575 C5orf17Q8NAS9 161 aa9.61□□□□□ -0.87
USP6NL-201ENST00000277575 P2RX4Q99571 388 aa9.61□□□□□ -0.87
USP6NL-201ENST00000277575 TUBD1Q9UJT1 453 aa9.61□□□□□ -0.87
USP6NL-201ENST00000277575 ZNF407Q9C0G0 2248 aa9.61□□□□□ -0.87
USP6NL-201ENST00000277575 HEATR1Q9H583 2144 aaKnown RBP9.61□□□□□ -0.87
USP6NL-201ENST00000277575 ZNF716A6NP11 495 aa9.61□□□□□ -0.87
USP6NL-201ENST00000277575 DLL1O00548 723 aa9.61□□□□□ -0.87
USP6NL-201ENST00000277575 CDK2AP1O14519 115 aa9.61□□□□□ -0.87
USP6NL-201ENST00000277575 PDE6DO43924 150 aa9.61□□□□□ -0.87
USP6NL-201ENST00000277575 C1QL1O75973 258 aa9.61□□□□□ -0.87
USP6NL-201ENST00000277575 IZUMO4Q1ZYL8 232 aa9.61□□□□□ -0.87
USP6NL-201ENST00000277575 FAM209AQ5JX71 171 aa9.61□□□□□ -0.87
USP6NL-201ENST00000277575 H1FOOQ8IZA3 346 aaPredicted RBP9.61□□□□□ -0.87
USP6NL-201ENST00000277575 RALYQ9UKM9 306 aaKnown RBP9.61□□□□□ -0.87
USP6NL-201ENST00000277575 TRBV23-1A0A0A0MS06 115 aa9.61□□□□□ -0.87
USP6NL-201ENST00000277575 A0A0G2JK05 382 aa9.61□□□□□ -0.87
USP6NL-201ENST00000277575 CORTO00230 105 aa9.61□□□□□ -0.87
USP6NL-201ENST00000277575 P01737 135 aa9.61□□□□□ -0.87
USP6NL-201ENST00000277575 LIPFP07098 398 aa9.61□□□□□ -0.87
USP6NL-201ENST00000277575 RPS11P62280 158 aaKnown RBP eCLIP9.61□□□□□ -0.87
USP6NL-201ENST00000277575 ABLIM2Q6H8Q1 611 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms