RNA–Protein interactions for RNA: ENST00000277549.9

CACNA1B-201, Transcript of calcium voltage-gated channel subunit alpha1 B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1B, Length 7,158 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1B-201ENST00000277549 CFAP161Q6P656 301 aa17.49■□□□□ 0.39
CACNA1B-201ENST00000277549 B4DEV8 164 aa17.49■□□□□ 0.39
CACNA1B-201ENST00000277549 CD1AP06126 327 aa17.49■□□□□ 0.39
CACNA1B-201ENST00000277549 PGA4P0DJD7 388 aa17.49■□□□□ 0.39
CACNA1B-201ENST00000277549 PGA5P0DJD9 388 aa17.49■□□□□ 0.39
CACNA1B-201ENST00000277549 CD24P25063 80 aa17.49■□□□□ 0.39
CACNA1B-201ENST00000277549 LINC00596Q86U02 117 aa17.49■□□□□ 0.39
CACNA1B-201ENST00000277549 CLEC7AQ9BXN2 247 aa17.49■□□□□ 0.39
CACNA1B-201ENST00000277549 PILRBQ9UKJ0 227 aa17.49■□□□□ 0.39
CACNA1B-201ENST00000277549 A0A1W2PP11 408 aa17.48■□□□□ 0.39
CACNA1B-201ENST00000277549 LIPFP07098 398 aa17.48■□□□□ 0.39
CACNA1B-201ENST00000277549 IGLV3-16A0A075B6K0 115 aa17.48■□□□□ 0.39
CACNA1B-201ENST00000277549 FOXH1O75593 365 aa17.48■□□□□ 0.39
CACNA1B-201ENST00000277549 DNAL4O96015 105 aa17.48■□□□□ 0.39
CACNA1B-201ENST00000277549 GLIPR1P48060 266 aa17.48■□□□□ 0.39
CACNA1B-201ENST00000277549 KLF14Q8TD94 323 aaPredicted RBP17.48■□□□□ 0.39
CACNA1B-201ENST00000277549 WNT10AQ9GZT5 417 aa17.48■□□□□ 0.39
CACNA1B-201ENST00000277549 TMEM160Q9NX00 188 aa17.48■□□□□ 0.39
CACNA1B-201ENST00000277549 CXorf51AA0A1B0GTR3 108 aa17.48■□□□□ 0.39
CACNA1B-201ENST00000277549 ABHD17AQ96GS6 310 aa17.48■□□□□ 0.39
CACNA1B-201ENST00000277549 IL19Q9UHD0 177 aa17.48■□□□□ 0.39
CACNA1B-201ENST00000277549 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.48■□□□□ 0.39
CACNA1B-201ENST00000277549 SLC25A45Q8N413 288 aa17.48■□□□□ 0.39
CACNA1B-201ENST00000277549 C18orf15Q96N68 181 aa17.48■□□□□ 0.39
CACNA1B-201ENST00000277549 NPVFQ9HCQ7 196 aa17.48■□□□□ 0.39
CACNA1B-201ENST00000277549 MC5RP33032 325 aa17.48■□□□□ 0.39
CACNA1B-201ENST00000277549 MSRB3Q8IXL7 192 aa17.48■□□□□ 0.39
CACNA1B-201ENST00000277549 CHST5Q9GZS9 411 aa17.48■□□□□ 0.39
CACNA1B-201ENST00000277549 GOLT1AQ6ZVE7 132 aa17.48■□□□□ 0.39
CACNA1B-201ENST00000277549 ZNF418Q8TF45 676 aaPredicted RBP17.48■□□□□ 0.39
CACNA1B-201ENST00000277549 SIGLEC5O15389 551 aa17.47■□□□□ 0.39
CACNA1B-201ENST00000277549 ZNRF1Q8ND25 227 aa17.47■□□□□ 0.39
CACNA1B-201ENST00000277549 ST6GALNAC2Q9UJ37 374 aa17.47■□□□□ 0.39
CACNA1B-201ENST00000277549 TCRBV4S1A1TA0A5B7 111 aa17.47■□□□□ 0.39
CACNA1B-201ENST00000277549 SRSF7Q16629 238 aaKnown RBP eCLIP17.47■□□□□ 0.39
CACNA1B-201ENST00000277549 COLCA1Q6ZS62 124 aa17.47■□□□□ 0.39
CACNA1B-201ENST00000277549 GALNT14Q96FL9 552 aa17.47■□□□□ 0.39
CACNA1B-201ENST00000277549 LRRC3BQ96PB8 259 aa17.47■□□□□ 0.39
CACNA1B-201ENST00000277549 GCSAMQ8N6F7 178 aa17.47■□□□□ 0.39
CACNA1B-201ENST00000277549 TRAV12-3A0A0B4J271 114 aa17.47■□□□□ 0.39
CACNA1B-201ENST00000277549 NPIPB11E5RHQ5 1161 aa17.47■□□□□ 0.39
CACNA1B-201ENST00000277549 CTSBP07858 339 aa17.47■□□□□ 0.39
CACNA1B-201ENST00000277549 GP6Q9HCN6 339 aa17.47■□□□□ 0.39
CACNA1B-201ENST00000277549 A0A1W2PPV9 198 aa17.46■□□□□ 0.39
CACNA1B-201ENST00000277549 RNASEH2CQ8TDP1 164 aaKnown RBP17.46■□□□□ 0.39
CACNA1B-201ENST00000277549 DNASE2BQ8WZ79 361 aa17.46■□□□□ 0.39
CACNA1B-201ENST00000277549 FOXA2Q9Y261 457 aaPredicted RBP17.46■□□□□ 0.39
CACNA1B-201ENST00000277549 RAB9AP51151 201 aa17.46■□□□□ 0.39
CACNA1B-201ENST00000277549 BSPH1Q075Z2 132 aa17.46■□□□□ 0.39
CACNA1B-201ENST00000277549 OR4D5Q8NGN0 318 aa17.46■□□□□ 0.39
CACNA1B-201ENST00000277549 KIAA0040Q15053 153 aa17.46■□□□□ 0.39
CACNA1B-201ENST00000277549 RPL39P5Q59GN2 51 aa17.46■□□□□ 0.39
CACNA1B-201ENST00000277549 C10orf111Q8N326 155 aa17.46■□□□□ 0.39
CACNA1B-201ENST00000277549 SPATA45Q537H7 98 aa17.46■□□□□ 0.39
CACNA1B-201ENST00000277549 ATP6V0CP27449 155 aa17.46■□□□□ 0.38
CACNA1B-201ENST00000277549 GPR183P32249 361 aa17.46■□□□□ 0.38
CACNA1B-201ENST00000277549 MAST2Q6P0Q8 1798 aa17.45■□□□□ 0.38
CACNA1B-201ENST00000277549 TRBV20OR9-2A0A075B6H5 130 aa17.45■□□□□ 0.38
CACNA1B-201ENST00000277549 A0A087X0M5 115 aa17.45■□□□□ 0.38
CACNA1B-201ENST00000277549 A0A1B0GX30 115 aa17.45■□□□□ 0.38
CACNA1B-201ENST00000277549 TSPAN7P41732 249 aa17.45■□□□□ 0.38
CACNA1B-201ENST00000277549 CHAC2Q8WUX2 184 aa17.45■□□□□ 0.38
CACNA1B-201ENST00000277549 NUP205Q92621 2012 aa17.45■□□□□ 0.38
CACNA1B-201ENST00000277549 DDA1Q9BW61 102 aa17.45■□□□□ 0.38
CACNA1B-201ENST00000277549 SFRP2Q96HF1 295 aa17.45■□□□□ 0.38
CACNA1B-201ENST00000277549 ZNF430Q9H8G1 570 aaPredicted RBP17.45■□□□□ 0.38
CACNA1B-201ENST00000277549 ARL14EPLP0DKL9 152 aa17.45■□□□□ 0.38
CACNA1B-201ENST00000277549 UNC119Q13432 240 aa17.45■□□□□ 0.38
CACNA1B-201ENST00000277549 KIAA1644Q3SXP7 199 aa17.45■□□□□ 0.38
CACNA1B-201ENST00000277549 P2RY6Q15077 328 aa17.44■□□□□ 0.38
CACNA1B-201ENST00000277549 FBXL15Q9H469 300 aa17.44■□□□□ 0.38
CACNA1B-201ENST00000277549 ALKBH7Q9BT30 221 aaPredicted RBP17.44■□□□□ 0.38
CACNA1B-201ENST00000277549 CELA3AP09093 270 aa17.44■□□□□ 0.38
CACNA1B-201ENST00000277549 EFNB1P98172 346 aa17.44■□□□□ 0.38
CACNA1B-201ENST00000277549 MMD2Q8IY49 270 aa17.44■□□□□ 0.38
CACNA1B-201ENST00000277549 CTXND1A0A1B0GTU2 59 aa17.44■□□□□ 0.38
CACNA1B-201ENST00000277549 ZG16O60844 167 aa17.44■□□□□ 0.38
CACNA1B-201ENST00000277549 WNT2BQ93097 391 aa17.44■□□□□ 0.38
CACNA1B-201ENST00000277549 QTRT1Q9BXR0 403 aaKnown RBP17.44■□□□□ 0.38
CACNA1B-201ENST00000277549 CRYBA2P53672 197 aa17.44■□□□□ 0.38
CACNA1B-201ENST00000277549 AHDC1Q5TGY3 1603 aaPredicted RBP17.43■□□□□ 0.38
CACNA1B-201ENST00000277549 GFI1BQ5VTD9 330 aa17.43■□□□□ 0.38
CACNA1B-201ENST00000277549 PSCAO43653 123 aa17.43■□□□□ 0.38
CACNA1B-201ENST00000277549 TMEM95Q3KNT9 176 aa17.43■□□□□ 0.38
CACNA1B-201ENST00000277549 CHRNA10Q9GZZ6 450 aa17.43■□□□□ 0.38
CACNA1B-201ENST00000277549 CYB5R1Q9UHQ9 305 aa17.43■□□□□ 0.38
CACNA1B-201ENST00000277549 FXYD1O00168 92 aa17.43■□□□□ 0.38
CACNA1B-201ENST00000277549 HOXD4P09016 255 aaPredicted RBP17.43■□□□□ 0.38
CACNA1B-201ENST00000277549 DMKNQ6E0U4 476 aaPredicted RBP17.43■□□□□ 0.38
CACNA1B-201ENST00000277549 FAM209BQ5JX69 171 aa17.43■□□□□ 0.38
CACNA1B-201ENST00000277549 GTSCR1Q86UQ5 136 aa17.43■□□□□ 0.38
CACNA1B-201ENST00000277549 SPSB4Q96A44 273 aa17.43■□□□□ 0.38
CACNA1B-201ENST00000277549 HSPB9Q9BQS6 159 aa17.43■□□□□ 0.38
CACNA1B-201ENST00000277549 DOCK2Q92608 1830 aa17.43■□□□□ 0.38
CACNA1B-201ENST00000277549 CXCL3P19876 107 aa17.42■□□□□ 0.38
CACNA1B-201ENST00000277549 APOBEC3AP31941 199 aaPredicted RBP17.42■□□□□ 0.38
CACNA1B-201ENST00000277549 FAM71F2Q6NXP2 309 aa17.42■□□□□ 0.38
CACNA1B-201ENST00000277549 MRPS16Q9Y3D3 137 aaKnown RBP17.42■□□□□ 0.38
CACNA1B-201ENST00000277549 CRPP02741 224 aa17.42■□□□□ 0.38
CACNA1B-201ENST00000277549 C10orf35Q96D05 121 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms