RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 RPL39P5Q59GN2 51 aa7.91□□□□□ -1.14
TRIM55-201ENST00000276573 LYPD2Q6UXB3 125 aa7.91□□□□□ -1.14
TRIM55-201ENST00000276573 C1orf229Q6ZS94 237 aaPredicted RBP7.91□□□□□ -1.14
TRIM55-201ENST00000276573 H2BFWTQ7Z2G1 175 aa7.91□□□□□ -1.14
TRIM55-201ENST00000276573 STX12Q86Y82 276 aa7.91□□□□□ -1.14
TRIM55-201ENST00000276573 TMEM217Q8N7C4 229 aa7.91□□□□□ -1.14
TRIM55-201ENST00000276573 ZNF439Q8NDP4 499 aa7.91□□□□□ -1.14
TRIM55-201ENST00000276573 ABHD14AQ9BUJ0 271 aa7.91□□□□□ -1.14
TRIM55-201ENST00000276573 HRH4Q9H3N8 390 aa7.91□□□□□ -1.14
TRIM55-201ENST00000276573 RBKSQ9H477 322 aa7.91□□□□□ -1.14
TRIM55-201ENST00000276573 HSPB7Q9UBY9 170 aa7.91□□□□□ -1.14
TRIM55-201ENST00000276573 CACFD1Q9UGQ2 172 aa7.91□□□□□ -1.14
TRIM55-201ENST00000276573 LINC00312Q9Y6C7 94 aa7.91□□□□□ -1.14
TRIM55-201ENST00000276573 POLEQ07864 2286 aa7.91□□□□□ -1.14
TRIM55-201ENST00000276573 A0A1W2PPE3 182 aa7.9□□□□□ -1.14
TRIM55-201ENST00000276573 H3BP45 60 aa7.9□□□□□ -1.14
TRIM55-201ENST00000276573 RBFOX2O43251 390 aaKnown RBP eCLIP7.9□□□□□ -1.14
TRIM55-201ENST00000276573 FCGR3BO75015 233 aa7.9□□□□□ -1.14
TRIM55-201ENST00000276573 FCN3O75636 299 aa7.9□□□□□ -1.14
TRIM55-201ENST00000276573 MMP23AO75900 390 aa7.9□□□□□ -1.14
TRIM55-201ENST00000276573 ATP6V0CP27449 155 aa7.9□□□□□ -1.14
TRIM55-201ENST00000276573 LOXP28300 417 aaPredicted RBP7.9□□□□□ -1.14
TRIM55-201ENST00000276573 RAB5CP51148 216 aa7.9□□□□□ -1.14
TRIM55-201ENST00000276573 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.9□□□□□ -1.14
TRIM55-201ENST00000276573 LYPD6BQ8NI32 183 aa7.9□□□□□ -1.14
TRIM55-201ENST00000276573 R3HDM4Q96D70 268 aa7.9□□□□□ -1.14
TRIM55-201ENST00000276573 TSNAXQ99598 290 aaKnown RBP7.9□□□□□ -1.14
TRIM55-201ENST00000276573 SPTBN4Q9H254 2564 aa7.9□□□□□ -1.14
TRIM55-201ENST00000276573 SH3BGRL3Q9H299 93 aa7.9□□□□□ -1.14
TRIM55-201ENST00000276573 RPUSD1Q9UJJ7 312 aaKnown RBP7.9□□□□□ -1.14
TRIM55-201ENST00000276573 PRELID3BQ9Y3B1 194 aa7.9□□□□□ -1.14
TRIM55-201ENST00000276573 IGHV1-69-2A0A0G2JMI3 117 aa7.9□□□□□ -1.15
TRIM55-201ENST00000276573 NDUFB3O43676 98 aa7.9□□□□□ -1.15
TRIM55-201ENST00000276573 SCO1O75880 301 aa7.9□□□□□ -1.15
TRIM55-201ENST00000276573 RPL31P62899 125 aaKnown RBP7.9□□□□□ -1.15
TRIM55-201ENST00000276573 MRPS11P82912 194 aaKnown RBP7.9□□□□□ -1.15
TRIM55-201ENST00000276573 TMEM267Q0VDI3 215 aaPredicted RBP7.9□□□□□ -1.15
TRIM55-201ENST00000276573 ZNF672Q499Z4 452 aaPredicted RBP7.9□□□□□ -1.15
TRIM55-201ENST00000276573 Q6ZRG5 221 aa7.9□□□□□ -1.15
TRIM55-201ENST00000276573 OR10A7Q8NGE5 316 aa7.9□□□□□ -1.15
TRIM55-201ENST00000276573 DDB2Q92466 427 aa7.9□□□□□ -1.15
TRIM55-201ENST00000276573 S1PR3Q99500 378 aa7.9□□□□□ -1.15
TRIM55-201ENST00000276573 ATP5SQ99766 215 aa7.9□□□□□ -1.15
TRIM55-201ENST00000276573 ZNF251Q9BRH9 671 aa7.9□□□□□ -1.15
TRIM55-201ENST00000276573 NARFLQ9H6Q4 476 aa7.9□□□□□ -1.15
TRIM55-201ENST00000276573 C19orf12Q9NSK7 152 aa7.9□□□□□ -1.15
TRIM55-201ENST00000276573 NUP50Q9UKX7 468 aa7.9□□□□□ -1.15
TRIM55-201ENST00000276573 STRAPQ9Y3F4 350 aaKnown RBP7.9□□□□□ -1.15
TRIM55-201ENST00000276573 RFNGQ9Y644 331 aa7.9□□□□□ -1.15
TRIM55-201ENST00000276573 DSCAML1Q8TD84 2053 aa7.89□□□□□ -1.15
TRIM55-201ENST00000276573 DFFBO76075 338 aa7.89□□□□□ -1.15
TRIM55-201ENST00000276573 KIR2DS2P43631 304 aa7.89□□□□□ -1.15
TRIM55-201ENST00000276573 F2RL1P55085 397 aa7.89□□□□□ -1.15
TRIM55-201ENST00000276573 SRSF3P84103 164 aaKnown RBP7.89□□□□□ -1.15
TRIM55-201ENST00000276573 TFF3Q07654 80 aa7.89□□□□□ -1.15
TRIM55-201ENST00000276573 ARL16Q0P5N6 197 aa7.89□□□□□ -1.15
TRIM55-201ENST00000276573 ZNF273Q14593 569 aa7.89□□□□□ -1.15
TRIM55-201ENST00000276573 SPANXN5Q5MJ07 72 aa7.89□□□□□ -1.15
TRIM55-201ENST00000276573 PRAMEF5Q5TYX0 476 aa7.89□□□□□ -1.15
TRIM55-201ENST00000276573 TMEM200BQ69YZ2 307 aa7.89□□□□□ -1.15
TRIM55-201ENST00000276573 HAPLN4Q86UW8 402 aa7.89□□□□□ -1.15
TRIM55-201ENST00000276573 MUC15Q8N387 334 aa7.89□□□□□ -1.15
TRIM55-201ENST00000276573 OR2G3Q8NGZ4 309 aa7.89□□□□□ -1.15
TRIM55-201ENST00000276573 GNPNAT1Q96EK6 184 aaPredicted RBP7.89□□□□□ -1.15
TRIM55-201ENST00000276573 TMEM204Q9BSN7 226 aa7.89□□□□□ -1.15
TRIM55-201ENST00000276573 KAAG1Q9UBP8 84 aa7.89□□□□□ -1.15
TRIM55-201ENST00000276573 SAA2-SAA4A0A096LPE2 208 aa7.88□□□□□ -1.15
TRIM55-201ENST00000276573 TMEM218A2RU14 115 aa7.88□□□□□ -1.15
TRIM55-201ENST00000276573 MARCH11A6NNE9 402 aa7.88□□□□□ -1.15
TRIM55-201ENST00000276573 FAM90A9PA6NNJ1 464 aa7.88□□□□□ -1.15
TRIM55-201ENST00000276573 TRIM77I1YAP6 450 aa7.88□□□□□ -1.15
TRIM55-201ENST00000276573 NDUFA2O43678 99 aa7.88□□□□□ -1.15
TRIM55-201ENST00000276573 CRYZL1O95825 349 aa7.88□□□□□ -1.15
TRIM55-201ENST00000276573 IFNA5P01569 189 aa7.88□□□□□ -1.15
TRIM55-201ENST00000276573 OR9G9P0C7N8 305 aa7.88□□□□□ -1.15
TRIM55-201ENST00000276573 METTL15P1P0C7V9 234 aa7.88□□□□□ -1.15
TRIM55-201ENST00000276573 SAA2P0DJI9 122 aaPredicted RBP7.88□□□□□ -1.15
TRIM55-201ENST00000276573 COL8A2P25067 703 aa7.88□□□□□ -1.15
TRIM55-201ENST00000276573 CAMLGP49069 296 aa7.88□□□□□ -1.15
TRIM55-201ENST00000276573 THBS3P49746 956 aa7.88□□□□□ -1.15
TRIM55-201ENST00000276573 ARHGDIBP52566 201 aa7.88□□□□□ -1.15
TRIM55-201ENST00000276573 AKR1C1Q04828 323 aa7.88□□□□□ -1.15
TRIM55-201ENST00000276573 HFEQ30201 348 aa7.88□□□□□ -1.15
TRIM55-201ENST00000276573 LRRC10Q5BKY1 277 aa7.88□□□□□ -1.15
TRIM55-201ENST00000276573 TMEM14EPQ6UXP3 125 aa7.88□□□□□ -1.15
TRIM55-201ENST00000276573 TMEM182Q6ZP80 229 aaPredicted RBP7.88□□□□□ -1.15
TRIM55-201ENST00000276573 SLC25A48Q6ZT89 311 aaKnown RBP7.88□□□□□ -1.15
TRIM55-201ENST00000276573 LYG1Q8N1E2 194 aa7.88□□□□□ -1.15
TRIM55-201ENST00000276573 GAL3ST2Q9H3Q3 398 aa7.88□□□□□ -1.15
TRIM55-201ENST00000276573 CTSZQ9UBR2 303 aa7.88□□□□□ -1.15
TRIM55-201ENST00000276573 TANC2Q9HCD6 1990 aa7.88□□□□□ -1.15
TRIM55-201ENST00000276573 DVL1O14640 695 aa7.88□□□□□ -1.15
TRIM55-201ENST00000276573 PRH1P02810 166 aa7.88□□□□□ -1.15
TRIM55-201ENST00000276573 DAOP14920 347 aa7.88□□□□□ -1.15
TRIM55-201ENST00000276573 CCL3L1P16619 93 aa7.88□□□□□ -1.15
TRIM55-201ENST00000276573 FHITP49789 147 aa7.88□□□□□ -1.15
TRIM55-201ENST00000276573 GNG10P50151 68 aa7.88□□□□□ -1.15
TRIM55-201ENST00000276573 ERVFRD-1P60508 538 aa7.88□□□□□ -1.15
TRIM55-201ENST00000276573 AARDQ4LEZ3 155 aa7.88□□□□□ -1.15
TRIM55-201ENST00000276573 HEPN1Q6WQI6 88 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms