RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 TBC1D29Q9UFV1 150 aa13.8□□□□□ -0.2
UBR3-201ENST00000272793 H0Y8X5 98 aa13.8□□□□□ -0.2
UBR3-201ENST00000272793 ATP6V0CP27449 155 aa13.8□□□□□ -0.2
UBR3-201ENST00000272793 GGTLC2Q14390 218 aa13.8□□□□□ -0.2
UBR3-201ENST00000272793 TCTN3Q6NUS6 607 aa13.8□□□□□ -0.2
UBR3-201ENST00000272793 SVIPQ8NHG7 77 aa13.8□□□□□ -0.2
UBR3-201ENST00000272793 SCNM1Q9BWG6 230 aa13.8□□□□□ -0.2
UBR3-201ENST00000272793 TRAV2A0A0B4J234 112 aa13.79□□□□□ -0.2
UBR3-201ENST00000272793 HCP5Q6MZN7 132 aa13.79□□□□□ -0.2
UBR3-201ENST00000272793 SH2D5Q6ZV89 423 aa13.79□□□□□ -0.2
UBR3-201ENST00000272793 OTOSQ8NHW6 89 aa13.79□□□□□ -0.2
UBR3-201ENST00000272793 SPNS2Q8IVW8 549 aa13.79□□□□□ -0.2
UBR3-201ENST00000272793 MS4A3Q96HJ5 214 aa13.79□□□□□ -0.2
UBR3-201ENST00000272793 JPT2Q9H910 190 aa13.79□□□□□ -0.2
UBR3-201ENST00000272793 GRIFINA4D1Z8 144 aa13.79□□□□□ -0.2
UBR3-201ENST00000272793 PGPA6NDG6 321 aa13.79□□□□□ -0.2
UBR3-201ENST00000272793 PSG9Q00887 426 aa13.79□□□□□ -0.2
UBR3-201ENST00000272793 TNFSF18Q9UNG2 199 aa13.79□□□□□ -0.2
UBR3-201ENST00000272793 hCG_38984A0A1B0GV85 526 aa13.79□□□□□ -0.2
UBR3-201ENST00000272793 CD8AP01732 235 aa13.79□□□□□ -0.2
UBR3-201ENST00000272793 PRB3Q04118 309 aaPredicted RBP13.79□□□□□ -0.2
UBR3-201ENST00000272793 ADAD2Q8NCV1 583 aaKnown RBP13.79□□□□□ -0.2
UBR3-201ENST00000272793 ZBP1Q9H171 429 aa13.79□□□□□ -0.2
UBR3-201ENST00000272793 ZNF32P17041 273 aa13.79□□□□□ -0.2
UBR3-201ENST00000272793 ARL14EPLP0DKL9 152 aa13.79□□□□□ -0.2
UBR3-201ENST00000272793 TMEM42Q69YG0 159 aa13.79□□□□□ -0.2
UBR3-201ENST00000272793 NPVFQ9HCQ7 196 aa13.79□□□□□ -0.2
UBR3-201ENST00000272793 GUSBP11Q6P575 273 aa13.78□□□□□ -0.2
UBR3-201ENST00000272793 DAPP1Q9UN19 280 aa13.78□□□□□ -0.2
UBR3-201ENST00000272793 FIZ1Q96SL8 496 aa13.78□□□□□ -0.2
UBR3-201ENST00000272793 PHLPP1O60346 1717 aa13.78□□□□□ -0.2
UBR3-201ENST00000272793 DHHO43323 396 aa13.78□□□□□ -0.2
UBR3-201ENST00000272793 SYNGR3O43761 229 aa13.78□□□□□ -0.2
UBR3-201ENST00000272793 SERF2P84101 59 aa13.78□□□□□ -0.2
UBR3-201ENST00000272793 UBE2DNLQ8IWF7 75 aa13.78□□□□□ -0.2
UBR3-201ENST00000272793 H7C1H1 209 aa13.78□□□□□ -0.2
UBR3-201ENST00000272793 WDR34Q96EX3 536 aa13.78□□□□□ -0.2
UBR3-201ENST00000272793 ATAD5Q96QE3 1844 aa13.78□□□□□ -0.2
UBR3-201ENST00000272793 NPIPB8E9PQR5 432 aa13.78□□□□□ -0.2
UBR3-201ENST00000272793 NPIPB9F8W1W9 429 aa13.78□□□□□ -0.2
UBR3-201ENST00000272793 NPIPB7O75200 414 aa13.78□□□□□ -0.2
UBR3-201ENST00000272793 FOXF1Q12946 379 aa13.78□□□□□ -0.2
UBR3-201ENST00000272793 FAM106AQ4KMX7 169 aa13.78□□□□□ -0.2
UBR3-201ENST00000272793 HMGCLL1Q8TB92 370 aa13.78□□□□□ -0.2
UBR3-201ENST00000272793 A0A0U1RRA0 63 aa13.77□□□□□ -0.2
UBR3-201ENST00000272793 ZNF98A6NK75 572 aa13.77□□□□□ -0.2
UBR3-201ENST00000272793 NCR2O95944 276 aa13.77□□□□□ -0.2
UBR3-201ENST00000272793 COL11A1P12107 1806 aaPredicted RBP13.77□□□□□ -0.2
UBR3-201ENST00000272793 CXCL3P19876 107 aa13.77□□□□□ -0.2
UBR3-201ENST00000272793 CRYBB2P43320 205 aa13.77□□□□□ -0.2
UBR3-201ENST00000272793 SYS1Q8N2H4 156 aa13.77□□□□□ -0.2
UBR3-201ENST00000272793 RSPO3Q9BXY4 272 aaPredicted RBP13.77□□□□□ -0.2
UBR3-201ENST00000272793 SHPRHQ149N8 1683 aa13.77□□□□□ -0.2
UBR3-201ENST00000272793 EIF3GO75821 320 aaKnown RBP eCLIP13.77□□□□□ -0.2
UBR3-201ENST00000272793 REG1AP05451 166 aa13.77□□□□□ -0.2
UBR3-201ENST00000272793 TMEM86BQ8N661 226 aa13.77□□□□□ -0.2
UBR3-201ENST00000272793 SLIRPQ9GZT3 109 aaKnown RBP13.77□□□□□ -0.2
UBR3-201ENST00000272793 TRGV2A0A075B6R0 118 aa13.77□□□□□ -0.2
UBR3-201ENST00000272793 PITX3O75364 302 aa13.77□□□□□ -0.2
UBR3-201ENST00000272793 ZNF625Q96I27 306 aaPredicted RBP13.77□□□□□ -0.2
UBR3-201ENST00000272793 TINAGQ9UJW2 476 aa13.77□□□□□ -0.2
UBR3-201ENST00000272793 RTN4RL2Q86UN3 420 aa13.77□□□□□ -0.21
UBR3-201ENST00000272793 A0A1B0GTH9 108 aa13.77□□□□□ -0.21
UBR3-201ENST00000272793 KLKB1P03952 638 aa13.77□□□□□ -0.21
UBR3-201ENST00000272793 TMEM50BP56557 158 aa13.77□□□□□ -0.21
UBR3-201ENST00000272793 EWSR1Q01844 656 aaKnown RBP eCLIP13.77□□□□□ -0.21
UBR3-201ENST00000272793 MRPL43Q8N983 215 aaKnown RBP13.77□□□□□ -0.21
UBR3-201ENST00000272793 WDR54Q9H977 334 aa13.77□□□□□ -0.21
UBR3-201ENST00000272793 IGHV3-64A0A075B6Q5 118 aa13.77□□□□□ -0.21
UBR3-201ENST00000272793 TTC9CQ8N5M4 171 aa13.77□□□□□ -0.21
UBR3-201ENST00000272793 ST6GAL2Q96JF0 529 aa13.77□□□□□ -0.21
UBR3-201ENST00000272793 GTSF1LQ9H1H1 148 aa13.77□□□□□ -0.21
UBR3-201ENST00000272793 SLC17A5Q9NRA2 495 aa13.77□□□□□ -0.21
UBR3-201ENST00000272793 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.77□□□□□ -0.21
UBR3-201ENST00000272793 PSCAO43653 123 aa13.77□□□□□ -0.21
UBR3-201ENST00000272793 RCC1P18754 421 aaPredicted RBP13.77□□□□□ -0.21
UBR3-201ENST00000272793 WDR38Q5JTN6 314 aa13.77□□□□□ -0.21
UBR3-201ENST00000272793 ESDP10768 282 aa13.76□□□□□ -0.21
UBR3-201ENST00000272793 FOXI3A8MTJ6 420 aaPredicted RBP13.76□□□□□ -0.21
UBR3-201ENST00000272793 LINC00869P0C866 280 aa13.76□□□□□ -0.21
UBR3-201ENST00000272793 MS4A4AQ96JQ5 239 aa13.76□□□□□ -0.21
UBR3-201ENST00000272793 RNF122Q9H9V4 155 aa13.76□□□□□ -0.21
UBR3-201ENST00000272793 TARM1B6A8C7 271 aa13.76□□□□□ -0.21
UBR3-201ENST00000272793 HBDP02042 147 aa13.76□□□□□ -0.21
UBR3-201ENST00000272793 C1orf43Q9BWL3 253 aa13.76□□□□□ -0.21
UBR3-201ENST00000272793 A0A1B0GW15 77 aa13.76□□□□□ -0.21
UBR3-201ENST00000272793 F8WEM9 126 aa13.76□□□□□ -0.21
UBR3-201ENST00000272793 ITGB1BP1O14713 200 aa13.76□□□□□ -0.21
UBR3-201ENST00000272793 CD5LO43866 347 aa13.76□□□□□ -0.21
UBR3-201ENST00000272793 LY6EQ16553 131 aa13.76□□□□□ -0.21
UBR3-201ENST00000272793 RPS11P62280 158 aaKnown RBP eCLIP13.76□□□□□ -0.21
UBR3-201ENST00000272793 CCL7P80098 99 aa13.76□□□□□ -0.21
UBR3-201ENST00000272793 ZNF784Q8NCA9 323 aaPredicted RBP13.76□□□□□ -0.21
UBR3-201ENST00000272793 NKX2-6A6NCS4 301 aa13.76□□□□□ -0.21
UBR3-201ENST00000272793 DCAF10Q5QP82 559 aa13.76□□□□□ -0.21
UBR3-201ENST00000272793 TCRBV5S2A0A599 114 aa13.75□□□□□ -0.21
UBR3-201ENST00000272793 AGFG2O95081 481 aa13.75□□□□□ -0.21
UBR3-201ENST00000272793 PPICP45877 212 aa13.75□□□□□ -0.21
UBR3-201ENST00000272793 IGHV3-66A0A0C4DH42 116 aa13.75□□□□□ -0.21
UBR3-201ENST00000272793 CD27P26842 260 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms