RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 LRRC75BQ2VPJ9 315 aa10.77□□□□□ -0.69
CPSF6-201ENST00000266679 ZNF787Q6DD87 383 aa10.77□□□□□ -0.69
CPSF6-201ENST00000266679 OR4C12Q96R67 309 aa10.77□□□□□ -0.69
CPSF6-201ENST00000266679 TUBA4BQ9H853 241 aa10.77□□□□□ -0.69
CPSF6-201ENST00000266679 TUBG2Q9NRH3 451 aa10.77□□□□□ -0.69
CPSF6-201ENST00000266679 PSG11Q9UQ72 335 aa10.77□□□□□ -0.69
CPSF6-201ENST00000266679 PTPN13Q12923 2485 aa10.76□□□□□ -0.69
CPSF6-201ENST00000266679 IGHV3OR15-7A0A075B7D8 119 aa10.76□□□□□ -0.69
CPSF6-201ENST00000266679 IFNL4K9M1U5 179 aa10.76□□□□□ -0.69
CPSF6-201ENST00000266679 CEACAM4O75871 244 aa10.76□□□□□ -0.69
CPSF6-201ENST00000266679 HSPB1P04792 205 aaKnown RBP10.76□□□□□ -0.69
CPSF6-201ENST00000266679 P0C879 139 aa10.76□□□□□ -0.69
CPSF6-201ENST00000266679 HOXA1P49639 335 aaPredicted RBP10.76□□□□□ -0.69
CPSF6-201ENST00000266679 BRWD1-AS2P59051 145 aa10.76□□□□□ -0.69
CPSF6-201ENST00000266679 LINC00205P59089 165 aa10.76□□□□□ -0.69
CPSF6-201ENST00000266679 RPS23P62266 143 aaKnown RBP10.76□□□□□ -0.69
CPSF6-201ENST00000266679 ZNF726P1Q15940 193 aa10.76□□□□□ -0.69
CPSF6-201ENST00000266679 RPRMLQ8N4K4 120 aa10.76□□□□□ -0.69
CPSF6-201ENST00000266679 RAB39BQ96DA2 213 aa10.76□□□□□ -0.69
CPSF6-201ENST00000266679 PLPPR2Q96GM1 343 aa10.76□□□□□ -0.69
CPSF6-201ENST00000266679 WDR61Q9GZS3 305 aaKnown RBP10.76□□□□□ -0.69
CPSF6-201ENST00000266679 UNKLQ9H9P5 680 aaKnown RBP10.76□□□□□ -0.69
CPSF6-201ENST00000266679 COA4Q9NYJ1 87 aa10.76□□□□□ -0.69
CPSF6-201ENST00000266679 HSPB7Q9UBY9 170 aa10.76□□□□□ -0.69
CPSF6-201ENST00000266679 SVILO95425 2214 aa10.76□□□□□ -0.69
CPSF6-201ENST00000266679 MBD3L4A6NDZ8 208 aaPredicted RBP10.76□□□□□ -0.69
CPSF6-201ENST00000266679 MBD3L3A6NE82 208 aaPredicted RBP10.76□□□□□ -0.69
CPSF6-201ENST00000266679 MBD3L5A6NJ08 208 aaPredicted RBP10.76□□□□□ -0.69
CPSF6-201ENST00000266679 ZFP92A6NM28 416 aa10.76□□□□□ -0.69
CPSF6-201ENST00000266679 PPIHO43447 177 aaKnown RBP10.76□□□□□ -0.69
CPSF6-201ENST00000266679 EIF3GO75821 320 aaKnown RBP eCLIP10.76□□□□□ -0.69
CPSF6-201ENST00000266679 OR2C1O95371 312 aa10.76□□□□□ -0.69
CPSF6-201ENST00000266679 PRDX2P32119 198 aa10.76□□□□□ -0.69
CPSF6-201ENST00000266679 RPS16P62249 146 aaKnown RBP10.76□□□□□ -0.69
CPSF6-201ENST00000266679 SPINK9Q5DT21 86 aa10.76□□□□□ -0.69
CPSF6-201ENST00000266679 BEND4Q6ZU67 534 aa10.76□□□□□ -0.69
CPSF6-201ENST00000266679 ZNF429Q86V71 674 aa10.76□□□□□ -0.69
CPSF6-201ENST00000266679 MBD3L2Q8NHZ7 208 aaPredicted RBP10.76□□□□□ -0.69
CPSF6-201ENST00000266679 LURAP1Q96LR2 239 aa10.76□□□□□ -0.69
CPSF6-201ENST00000266679 PSMG3Q9BT73 122 aaPredicted RBP10.76□□□□□ -0.69
CPSF6-201ENST00000266679 TOLLIPQ9H0E2 274 aa10.76□□□□□ -0.69
CPSF6-201ENST00000266679 LRRC30A6NM36 301 aa10.75□□□□□ -0.69
CPSF6-201ENST00000266679 LINC00473A8K010 186 aa10.75□□□□□ -0.69
CPSF6-201ENST00000266679 SPINT2O43291 252 aa10.75□□□□□ -0.69
CPSF6-201ENST00000266679 RAB5AP20339 215 aa10.75□□□□□ -0.69
CPSF6-201ENST00000266679 MZT1Q08AG7 82 aa10.75□□□□□ -0.69
CPSF6-201ENST00000266679 RNF212Q495C1 297 aa10.75□□□□□ -0.69
CPSF6-201ENST00000266679 SPRNQ5BIV9 151 aa10.75□□□□□ -0.69
CPSF6-201ENST00000266679 VHLLQ6RSH7 139 aa10.75□□□□□ -0.69
CPSF6-201ENST00000266679 TMEM14EPQ6UXP3 125 aa10.75□□□□□ -0.69
CPSF6-201ENST00000266679 ZDHHC16Q969W1 377 aa10.75□□□□□ -0.69
CPSF6-201ENST00000266679 S100PBPQ96BU1 408 aa10.75□□□□□ -0.69
CPSF6-201ENST00000266679 RCC1LQ96I51 464 aaKnown RBP10.75□□□□□ -0.69
CPSF6-201ENST00000266679 ZNF665Q9H7R5 613 aa10.75□□□□□ -0.69
CPSF6-201ENST00000266679 PCP4L1A6NKN8 68 aa10.74□□□□□ -0.69
CPSF6-201ENST00000266679 ZNF727A8MUV8 499 aa10.74□□□□□ -0.69
CPSF6-201ENST00000266679 C15orf65H3BRN8 121 aa10.74□□□□□ -0.69
CPSF6-201ENST00000266679 OR8U8P0C7N1 319 aa10.74□□□□□ -0.69
CPSF6-201ENST00000266679 TAGLN2P37802 199 aaKnown RBP10.74□□□□□ -0.69
CPSF6-201ENST00000266679 SNRPEP62304 92 aaKnown RBP10.74□□□□□ -0.69
CPSF6-201ENST00000266679 KHDC3LQ587J8 217 aa10.74□□□□□ -0.69
CPSF6-201ENST00000266679 TMEM41BQ5BJD5 291 aa10.74□□□□□ -0.69
CPSF6-201ENST00000266679 TAF15Q92804 592 aaKnown RBP eCLIP10.74□□□□□ -0.69
CPSF6-201ENST00000266679 LRRK2Q5S007 2527 aa10.74□□□□□ -0.69
CPSF6-201ENST00000266679 IGKV1D-17A0A075B6S4 117 aa10.74□□□□□ -0.69
CPSF6-201ENST00000266679 TRAV1-1A0A0B4J248 108 aa10.74□□□□□ -0.69
CPSF6-201ENST00000266679 K7EM74 188 aa10.74□□□□□ -0.69
CPSF6-201ENST00000266679 ZG16O60844 167 aa10.74□□□□□ -0.69
CPSF6-201ENST00000266679 RBMXL2O75526 392 aaKnown RBP10.74□□□□□ -0.69
CPSF6-201ENST00000266679 CLDN14O95500 239 aa10.74□□□□□ -0.69
CPSF6-201ENST00000266679 CD55P08174 381 aa10.74□□□□□ -0.69
CPSF6-201ENST00000266679 ZNF474Q6S9Z5 364 aaPredicted RBP10.74□□□□□ -0.69
CPSF6-201ENST00000266679 H2BFWTQ7Z2G1 175 aa10.74□□□□□ -0.69
CPSF6-201ENST00000266679 MOGAT3Q86VF5 341 aa10.74□□□□□ -0.69
CPSF6-201ENST00000266679 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.74□□□□□ -0.69
CPSF6-201ENST00000266679 USF3Q68DE3 2245 aa10.74□□□□□ -0.69
CPSF6-201ENST00000266679 A0A1B0GWJ7 208 aa10.73□□□□□ -0.69
CPSF6-201ENST00000266679 A0A1W2PPE3 182 aa10.73□□□□□ -0.69
CPSF6-201ENST00000266679 SRRM5B3KS81 715 aa10.73□□□□□ -0.69
CPSF6-201ENST00000266679 RAB29O14966 203 aa10.73□□□□□ -0.69
CPSF6-201ENST00000266679 ZNF737O75373 536 aa10.73□□□□□ -0.69
CPSF6-201ENST00000266679 DLK1P80370 383 aa10.73□□□□□ -0.69
CPSF6-201ENST00000266679 ZNF66Q6ZN08 573 aa10.73□□□□□ -0.69
CPSF6-201ENST00000266679 ZNF561Q8N587 486 aa10.73□□□□□ -0.69
CPSF6-201ENST00000266679 DTD1Q8TEA8 209 aa10.73□□□□□ -0.69
CPSF6-201ENST00000266679 OR2V2Q96R30 315 aa10.73□□□□□ -0.69
CPSF6-201ENST00000266679 PARD6GQ9BYG4 376 aaPredicted RBP10.73□□□□□ -0.69
CPSF6-201ENST00000266679 HIPK2Q9H2X6 1198 aa10.73□□□□□ -0.69
CPSF6-201ENST00000266679 FAM215AQ9Y5M1 114 aa10.73□□□□□ -0.69
CPSF6-201ENST00000266679 NBPF19A0A087WUL8 3843 aa10.73□□□□□ -0.69
CPSF6-201ENST00000266679 RP1L1Q8IWN7 2480 aaPredicted RBP10.73□□□□□ -0.69
CPSF6-201ENST00000266679 MAP1LC3B2A6NCE7 125 aa10.73□□□□□ -0.69
CPSF6-201ENST00000266679 SPRY3O43610 288 aa10.73□□□□□ -0.69
CPSF6-201ENST00000266679 BCL2P10415 239 aa10.73□□□□□ -0.69
CPSF6-201ENST00000266679 AGAP20933 346 aa10.73□□□□□ -0.69
CPSF6-201ENST00000266679 GPR12P47775 334 aa10.73□□□□□ -0.69
CPSF6-201ENST00000266679 RAB11AP62491 216 aa10.73□□□□□ -0.69
CPSF6-201ENST00000266679 ADAM5Q6NVV9 412 aa10.73□□□□□ -0.69
CPSF6-201ENST00000266679 TRAT1Q6PIZ9 186 aa10.73□□□□□ -0.69
CPSF6-201ENST00000266679 MBD3L1Q8WWY6 194 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms