RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 ZNF841Q6ZN19 808 aa9.49□□□□□ -0.89
SCAF11-201ENST00000266589 ZNF843Q8N446 348 aa9.49□□□□□ -0.89
SCAF11-201ENST00000266589 STOML3Q8TAV4 291 aa9.49□□□□□ -0.89
SCAF11-201ENST00000266589 RAB1CQ92928 201 aa9.49□□□□□ -0.89
SCAF11-201ENST00000266589 FBXL17Q9UF56 701 aa9.49□□□□□ -0.89
SCAF11-201ENST00000266589 DCHS2Q6V1P9 2916 aa9.49□□□□□ -0.89
SCAF11-201ENST00000266589 TRBV23-1A0A0A0MS06 115 aa9.49□□□□□ -0.89
SCAF11-201ENST00000266589 KIAA1324LA8MWY0 1029 aaPredicted RBP9.49□□□□□ -0.89
SCAF11-201ENST00000266589 P0C879 139 aa9.49□□□□□ -0.89
SCAF11-201ENST00000266589 RNF224P0DH78 156 aa9.49□□□□□ -0.89
SCAF11-201ENST00000266589 CAV2P51636 162 aa9.49□□□□□ -0.89
SCAF11-201ENST00000266589 TMEM33P57088 247 aa9.49□□□□□ -0.89
SCAF11-201ENST00000266589 GPR157Q5UAW9 335 aa9.49□□□□□ -0.89
SCAF11-201ENST00000266589 OR2C3Q8N628 320 aa9.49□□□□□ -0.89
SCAF11-201ENST00000266589 PHYHIPLQ96FC7 376 aa9.49□□□□□ -0.89
SCAF11-201ENST00000266589 S1PR3Q99500 378 aa9.49□□□□□ -0.89
SCAF11-201ENST00000266589 ZNF251Q9BRH9 671 aa9.49□□□□□ -0.89
SCAF11-201ENST00000266589 SMIM3Q9BZL3 60 aa9.49□□□□□ -0.89
SCAF11-201ENST00000266589 CHODLQ9H9P2 273 aa9.49□□□□□ -0.89
SCAF11-201ENST00000266589 ZNRD1Q9P1U0 126 aa9.49□□□□□ -0.89
SCAF11-201ENST00000266589 PRELID3BQ9Y3B1 194 aa9.49□□□□□ -0.89
SCAF11-201ENST00000266589 CHST1O43916 411 aa9.48□□□□□ -0.89
SCAF11-201ENST00000266589 DLX6P56179 175 aa9.48□□□□□ -0.89
SCAF11-201ENST00000266589 RPL7L1Q6DKI1 246 aaKnown RBP9.48□□□□□ -0.89
SCAF11-201ENST00000266589 OR8B3Q8NGG8 313 aa9.48□□□□□ -0.89
SCAF11-201ENST00000266589 DDB2Q92466 427 aa9.48□□□□□ -0.89
SCAF11-201ENST00000266589 RAB39BQ96DA2 213 aa9.48□□□□□ -0.89
SCAF11-201ENST00000266589 BSCL2Q96G97 398 aaPredicted RBP9.48□□□□□ -0.89
SCAF11-201ENST00000266589 OR8B2Q96RD0 313 aa9.48□□□□□ -0.89
SCAF11-201ENST00000266589 LYRM2Q9NU23 88 aaPredicted RBP9.48□□□□□ -0.89
SCAF11-201ENST00000266589 COA4Q9NYJ1 87 aa9.48□□□□□ -0.89
SCAF11-201ENST00000266589 FAM24AA6NFZ4 105 aa9.47□□□□□ -0.89
SCAF11-201ENST00000266589 MARCH11A6NNE9 402 aa9.47□□□□□ -0.89
SCAF11-201ENST00000266589 RBFOX2O43251 390 aaKnown RBP eCLIP9.47□□□□□ -0.89
SCAF11-201ENST00000266589 C1QL1O75973 258 aa9.47□□□□□ -0.89
SCAF11-201ENST00000266589 TMEM50AO95807 157 aa9.47□□□□□ -0.89
SCAF11-201ENST00000266589 HPRT1P00492 218 aa9.47□□□□□ -0.89
SCAF11-201ENST00000266589 MMP9P14780 707 aa9.47□□□□□ -0.89
SCAF11-201ENST00000266589 KIR2DS2P43631 304 aa9.47□□□□□ -0.89
SCAF11-201ENST00000266589 THBS3P49746 956 aa9.47□□□□□ -0.89
SCAF11-201ENST00000266589 EWSR1Q01844 656 aaKnown RBP eCLIP9.47□□□□□ -0.89
SCAF11-201ENST00000266589 FAM74A1Q5RGS3 127 aa9.47□□□□□ -0.89
SCAF11-201ENST00000266589 H2BFWTQ7Z2G1 175 aa9.47□□□□□ -0.89
SCAF11-201ENST00000266589 BAP18Q8IXM2 172 aa9.47□□□□□ -0.89
SCAF11-201ENST00000266589 R3HDM4Q96D70 268 aa9.47□□□□□ -0.89
SCAF11-201ENST00000266589 NEIL1Q96FI4 390 aaPredicted RBP9.47□□□□□ -0.89
SCAF11-201ENST00000266589 MIOXQ9UGB7 285 aa9.47□□□□□ -0.89
SCAF11-201ENST00000266589 IGSF23A1L1A6 192 aa9.47□□□□□ -0.89
SCAF11-201ENST00000266589 TOR1AO14656 332 aa9.47□□□□□ -0.89
SCAF11-201ENST00000266589 GPR37O15354 613 aa9.47□□□□□ -0.89
SCAF11-201ENST00000266589 NDUFS7O75251 213 aa9.47□□□□□ -0.89
SCAF11-201ENST00000266589 NHLH2Q02577 135 aa9.47□□□□□ -0.89
SCAF11-201ENST00000266589 MIDNQ504T8 468 aa9.47□□□□□ -0.89
SCAF11-201ENST00000266589 ADTRPQ96IZ2 230 aa9.47□□□□□ -0.89
SCAF11-201ENST00000266589 LINC00862A6NCI5 91 aa9.46□□□□□ -0.89
SCAF11-201ENST00000266589 SYNGR2O43760 224 aa9.46□□□□□ -0.89
SCAF11-201ENST00000266589 NMBP08949 121 aa9.46□□□□□ -0.89
SCAF11-201ENST00000266589 IGHV1-8P0DP01 117 aa9.46□□□□□ -0.89
SCAF11-201ENST00000266589 PAX9P55771 341 aa9.46□□□□□ -0.89
SCAF11-201ENST00000266589 WDR25Q64LD2 544 aaPredicted RBP9.46□□□□□ -0.89
SCAF11-201ENST00000266589 TMEM252Q8N6L7 170 aa9.46□□□□□ -0.89
SCAF11-201ENST00000266589 ZNF383Q8NA42 475 aa9.46□□□□□ -0.89
SCAF11-201ENST00000266589 OR4S2Q8NH73 311 aa9.46□□□□□ -0.89
SCAF11-201ENST00000266589 RAB40CQ96S21 281 aa9.46□□□□□ -0.89
SCAF11-201ENST00000266589 SLC25A31Q9H0C2 315 aa9.46□□□□□ -0.89
SCAF11-201ENST00000266589 NARFLQ9H6Q4 476 aa9.46□□□□□ -0.89
SCAF11-201ENST00000266589 DOCK11Q5JSL3 2073 aa9.46□□□□□ -0.89
SCAF11-201ENST00000266589 FAM90A26D6RGX4 464 aa9.46□□□□□ -0.9
SCAF11-201ENST00000266589 H3BP45 60 aa9.46□□□□□ -0.9
SCAF11-201ENST00000266589 F12P00748 615 aaPredicted RBP9.46□□□□□ -0.9
SCAF11-201ENST00000266589 GAPDHP04406 335 aaKnown RBP9.46□□□□□ -0.9
SCAF11-201ENST00000266589 IAPPP10997 89 aa9.46□□□□□ -0.9
SCAF11-201ENST00000266589 EIF5AP63241 154 aaKnown RBP9.46□□□□□ -0.9
SCAF11-201ENST00000266589 ZNF295-AS1Q8N0V1 137 aa9.46□□□□□ -0.9
SCAF11-201ENST00000266589 C11orf42Q8N5U0 333 aa9.46□□□□□ -0.9
SCAF11-201ENST00000266589 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.46□□□□□ -0.9
SCAF11-201ENST00000266589 SESN1Q9Y6P5 492 aa9.46□□□□□ -0.9
SCAF11-201ENST00000266589 ZFYVE26Q68DK2 2539 aa9.45□□□□□ -0.9
SCAF11-201ENST00000266589 A0A087X0M5 115 aa9.45□□□□□ -0.9
SCAF11-201ENST00000266589 PPIAL4CA0A0B4J2A2 164 aa9.45□□□□□ -0.9
SCAF11-201ENST00000266589 A0A1B0GX30 115 aa9.45□□□□□ -0.9
SCAF11-201ENST00000266589 A0A1W2PPH5 198 aa9.45□□□□□ -0.9
SCAF11-201ENST00000266589 J3QR06 171 aa9.45□□□□□ -0.9
SCAF11-201ENST00000266589 JTBO76095 146 aa9.45□□□□□ -0.9
SCAF11-201ENST00000266589 GOSR1O95249 250 aa9.45□□□□□ -0.9
SCAF11-201ENST00000266589 CRYZL1O95825 349 aa9.45□□□□□ -0.9
SCAF11-201ENST00000266589 PPIAL4GP0DN37 164 aa9.45□□□□□ -0.9
SCAF11-201ENST00000266589 GPR6P46095 362 aaPredicted RBP9.45□□□□□ -0.9
SCAF11-201ENST00000266589 EFNA4P52798 201 aa9.45□□□□□ -0.9
SCAF11-201ENST00000266589 ERVK-16P61578 105 aa9.45□□□□□ -0.9
SCAF11-201ENST00000266589 RPL23AP62750 156 aaKnown RBP9.45□□□□□ -0.9
SCAF11-201ENST00000266589 TNFRSF9Q07011 255 aa9.45□□□□□ -0.9
SCAF11-201ENST00000266589 ZNF833PQ6ZTB9 187 aa9.45□□□□□ -0.9
SCAF11-201ENST00000266589 SSX9Q7RTT3 188 aa9.45□□□□□ -0.9
SCAF11-201ENST00000266589 OR10X1Q8NGY0 326 aa9.45□□□□□ -0.9
SCAF11-201ENST00000266589 TMED6Q8WW62 240 aa9.45□□□□□ -0.9
SCAF11-201ENST00000266589 SLC25A32Q9H2D1 315 aa9.45□□□□□ -0.9
SCAF11-201ENST00000266589 WFDC1Q9HC57 220 aa9.45□□□□□ -0.9
SCAF11-201ENST00000266589 HSPB7Q9UBY9 170 aa9.45□□□□□ -0.9
SCAF11-201ENST00000266589 WSB1Q9Y6I7 421 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms