RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 ATG101Q9BSB4 218 aa14.1□□□□□ -0.15
SQLE-201ENST00000265896 MPLP40238 635 aa14.1□□□□□ -0.15
SQLE-201ENST00000265896 OR8G1Q15617 311 aa14.1□□□□□ -0.15
SQLE-201ENST00000265896 ASPHD1Q5U4P2 390 aa14.1□□□□□ -0.15
SQLE-201ENST00000265896 ZNF497Q6ZNH5 498 aa14.1□□□□□ -0.15
SQLE-201ENST00000265896 LIN7CQ9NUP9 197 aaKnown RBP14.1□□□□□ -0.15
SQLE-201ENST00000265896 LINC00473A8K010 186 aa14.1□□□□□ -0.15
SQLE-201ENST00000265896 PPP5D1E7EU14 171 aa14.1□□□□□ -0.15
SQLE-201ENST00000265896 J3QT63 122 aa14.1□□□□□ -0.15
SQLE-201ENST00000265896 NPPCP23582 126 aa14.1□□□□□ -0.15
SQLE-201ENST00000265896 PMS2P11Q13670 270 aa14.1□□□□□ -0.15
SQLE-201ENST00000265896 DCAF10Q5QP82 559 aa14.1□□□□□ -0.15
SQLE-201ENST00000265896 OR8G5Q8NG78 346 aa14.1□□□□□ -0.15
SQLE-201ENST00000265896 LRP5LA4QPB2 252 aa14.09□□□□□ -0.15
SQLE-201ENST00000265896 HAND1O96004 215 aa14.09□□□□□ -0.15
SQLE-201ENST00000265896 ARR3P36575 388 aa14.09□□□□□ -0.15
SQLE-201ENST00000265896 THBS3P49746 956 aa14.09□□□□□ -0.15
SQLE-201ENST00000265896 DUSP3P51452 185 aaPredicted RBP14.09□□□□□ -0.15
SQLE-201ENST00000265896 PPP1CBP62140 327 aa14.09□□□□□ -0.15
SQLE-201ENST00000265896 PSG7Q13046 419 aa14.09□□□□□ -0.15
SQLE-201ENST00000265896 FAM78BQ5VT40 261 aa14.09□□□□□ -0.15
SQLE-201ENST00000265896 ZNF114Q8NC26 417 aa14.09□□□□□ -0.15
SQLE-201ENST00000265896 TMEM45BQ96B21 275 aa14.09□□□□□ -0.15
SQLE-201ENST00000265896 IGKV3D-15A0A087WSY6 115 aa14.09□□□□□ -0.15
SQLE-201ENST00000265896 DUXBA0A1W2PPF3 345 aa14.09□□□□□ -0.15
SQLE-201ENST00000265896 HBZP02008 142 aa14.09□□□□□ -0.15
SQLE-201ENST00000265896 PSMB3P49720 205 aa14.09□□□□□ -0.15
SQLE-201ENST00000265896 SAXO1Q8IYX7 474 aa14.09□□□□□ -0.15
SQLE-201ENST00000265896 DTD1Q8TEA8 209 aa14.09□□□□□ -0.15
SQLE-201ENST00000265896 MISP3Q96FF7 219 aa14.09□□□□□ -0.15
SQLE-201ENST00000265896 ARRDC1-AS1Q9H2J1 176 aa14.09□□□□□ -0.15
SQLE-201ENST00000265896 TECTAO75443 2155 aa14.09□□□□□ -0.15
SQLE-201ENST00000265896 C1QTNF9P0C862 333 aa14.08□□□□□ -0.16
SQLE-201ENST00000265896 MBD3L1Q8WWY6 194 aa14.08□□□□□ -0.16
SQLE-201ENST00000265896 IL22RA2Q969J5 263 aa14.08□□□□□ -0.16
SQLE-201ENST00000265896 GZMBP10144 247 aa14.08□□□□□ -0.16
SQLE-201ENST00000265896 SRSF6Q13247 344 aaKnown RBP14.08□□□□□ -0.16
SQLE-201ENST00000265896 DHRS13Q6UX07 377 aa14.08□□□□□ -0.16
SQLE-201ENST00000265896 OR5B12Q96R08 314 aa14.08□□□□□ -0.16
SQLE-201ENST00000265896 RTL8AQ9BWD3 113 aa14.08□□□□□ -0.16
SQLE-201ENST00000265896 RIMS4Q9H426 269 aaPredicted RBP14.08□□□□□ -0.16
SQLE-201ENST00000265896 OPA3Q9H6K4 179 aa14.08□□□□□ -0.16
SQLE-201ENST00000265896 NAT8Q9UHE5 227 aa14.08□□□□□ -0.16
SQLE-201ENST00000265896 MPC1Q9Y5U8 109 aa14.08□□□□□ -0.16
SQLE-201ENST00000265896 OR5B21A6NL26 309 aa14.07□□□□□ -0.16
SQLE-201ENST00000265896 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.07□□□□□ -0.16
SQLE-201ENST00000265896 NDUFB4O95168 129 aa14.07□□□□□ -0.16
SQLE-201ENST00000265896 GYPAP02724 150 aa14.07□□□□□ -0.16
SQLE-201ENST00000265896 OPN1MWP04001 364 aa14.07□□□□□ -0.16
SQLE-201ENST00000265896 OPN1MW2P0DN77 364 aa14.07□□□□□ -0.16
SQLE-201ENST00000265896 OPN1MW3P0DN78 364 aa14.07□□□□□ -0.16
SQLE-201ENST00000265896 RAC2P15153 192 aa14.07□□□□□ -0.16
SQLE-201ENST00000265896 ZNF664Q8N3J9 261 aa14.07□□□□□ -0.16
SQLE-201ENST00000265896 GRIFINA4D1Z8 144 aa14.07□□□□□ -0.16
SQLE-201ENST00000265896 SPINK4O60575 86 aa14.07□□□□□ -0.16
SQLE-201ENST00000265896 CER1O95813 267 aa14.07□□□□□ -0.16
SQLE-201ENST00000265896 OR4A8P0C604 315 aa14.07□□□□□ -0.16
SQLE-201ENST00000265896 OR10P1Q8NGE3 313 aa14.07□□□□□ -0.16
SQLE-201ENST00000265896 SNIP1Q8TAD8 396 aaKnown RBP14.07□□□□□ -0.16
SQLE-201ENST00000265896 SSMEM1Q8WWF3 244 aa14.07□□□□□ -0.16
SQLE-201ENST00000265896 GALMQ96C23 342 aa14.07□□□□□ -0.16
SQLE-201ENST00000265896 QTRT1Q9BXR0 403 aaKnown RBP14.07□□□□□ -0.16
SQLE-201ENST00000265896 CDH20Q9HBT6 801 aa14.07□□□□□ -0.16
SQLE-201ENST00000265896 SPRR3Q9UBC9 169 aa14.07□□□□□ -0.16
SQLE-201ENST00000265896 INTS1Q8N201 2190 aaKnown RBP14.07□□□□□ -0.16
SQLE-201ENST00000265896 TRAV1-1A0A0B4J248 108 aa14.07□□□□□ -0.16
SQLE-201ENST00000265896 C11orf94C9JXX5 98 aa14.07□□□□□ -0.16
SQLE-201ENST00000265896 SH2D1BO14796 132 aa14.07□□□□□ -0.16
SQLE-201ENST00000265896 PFN1P07737 140 aaKnown RBP14.07□□□□□ -0.16
SQLE-201ENST00000265896 MRPL41Q8IXM3 137 aaKnown RBP14.07□□□□□ -0.16
SQLE-201ENST00000265896 OR13A1Q8NGR1 328 aa14.07□□□□□ -0.16
SQLE-201ENST00000265896 NINJ1Q92982 152 aa14.07□□□□□ -0.16
SQLE-201ENST00000265896 KCNIP1Q9NZI2 227 aa14.07□□□□□ -0.16
SQLE-201ENST00000265896 IGHV3OR15-7A0A075B7D8 119 aa14.06□□□□□ -0.16
SQLE-201ENST00000265896 IFNA1P01562 189 aa14.06□□□□□ -0.16
SQLE-201ENST00000265896 RND2P52198 227 aa14.06□□□□□ -0.16
SQLE-201ENST00000265896 H2BFWTQ7Z2G1 175 aa14.06□□□□□ -0.16
SQLE-201ENST00000265896 ZNF709Q8N972 641 aa14.06□□□□□ -0.16
SQLE-201ENST00000265896 OR1P1Q8NH06 330 aa14.06□□□□□ -0.16
SQLE-201ENST00000265896 GTF3AQ92664 365 aaKnown RBP14.06□□□□□ -0.16
SQLE-201ENST00000265896 LSM10Q969L4 123 aaKnown RBP14.06□□□□□ -0.16
SQLE-201ENST00000265896 HINT2Q9BX68 163 aa14.06□□□□□ -0.16
SQLE-201ENST00000265896 NPCDR1Q9BY65 106 aa14.06□□□□□ -0.16
SQLE-201ENST00000265896 PCNX2A6NKB5 2137 aa14.06□□□□□ -0.16
SQLE-201ENST00000265896 LRRC30A6NM36 301 aa14.06□□□□□ -0.16
SQLE-201ENST00000265896 TSTD3H0UI37 97 aa14.06□□□□□ -0.16
SQLE-201ENST00000265896 NUPR1O60356 82 aa14.06□□□□□ -0.16
SQLE-201ENST00000265896 SMPD2O60906 423 aa14.06□□□□□ -0.16
SQLE-201ENST00000265896 KBTBD11O94819 623 aa14.06□□□□□ -0.16
SQLE-201ENST00000265896 MYOD1P15172 320 aa14.06□□□□□ -0.16
SQLE-201ENST00000265896 UBE2NP61088 152 aaKnown RBP14.06□□□□□ -0.16
SQLE-201ENST00000265896 PNRC1Q12796 327 aaPredicted RBP14.06□□□□□ -0.16
SQLE-201ENST00000265896 TRA2AQ13595 282 aaKnown RBP eCLIP14.06□□□□□ -0.16
SQLE-201ENST00000265896 CYB5R2Q6BCY4 276 aa14.06□□□□□ -0.16
SQLE-201ENST00000265896 TMEM256Q8N2U0 113 aa14.06□□□□□ -0.16
SQLE-201ENST00000265896 FAM122AQ96E09 287 aa14.06□□□□□ -0.16
SQLE-201ENST00000265896 LINC00470Q9BZP3 86 aa14.06□□□□□ -0.16
SQLE-201ENST00000265896 TRAV3A0A0B4J244 114 aa14.05□□□□□ -0.16
SQLE-201ENST00000265896 FCGR3BO75015 233 aa14.05□□□□□ -0.16
SQLE-201ENST00000265896 SERF2P84101 59 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms