RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 TMEM267Q0VDI3 215 aaPredicted RBP12.51□□□□□ -0.41
USE1-201ENST00000263897 ZNF562Q6V9R5 426 aa12.51□□□□□ -0.41
USE1-201ENST00000263897 PDPNQ86YL7 162 aa12.51□□□□□ -0.41
USE1-201ENST00000263897 OR11H1Q8NG94 326 aa12.51□□□□□ -0.41
USE1-201ENST00000263897 OR5M8Q8NGP6 311 aa12.51□□□□□ -0.41
USE1-201ENST00000263897 FLYWCH2Q96CP2 140 aaKnown RBP12.51□□□□□ -0.41
USE1-201ENST00000263897 CLCC1Q96S66 551 aa12.51□□□□□ -0.41
USE1-201ENST00000263897 OR2D2Q9H210 308 aa12.51□□□□□ -0.41
USE1-201ENST00000263897 GNB4Q9HAV0 340 aa12.51□□□□□ -0.41
USE1-201ENST00000263897 SDHAF2Q9NX18 166 aa12.51□□□□□ -0.41
USE1-201ENST00000263897 DAPK2Q9UIK4 370 aa12.51□□□□□ -0.41
USE1-201ENST00000263897 RRP15Q9Y3B9 282 aaKnown RBP12.51□□□□□ -0.41
USE1-201ENST00000263897 IGKV1D-8A0A087WSZ0 117 aa12.5□□□□□ -0.41
USE1-201ENST00000263897 SOX15O60248 233 aa12.5□□□□□ -0.41
USE1-201ENST00000263897 SPDEFO95238 335 aa12.5□□□□□ -0.41
USE1-201ENST00000263897 SNRPBP14678 240 aaKnown RBP12.5□□□□□ -0.41
USE1-201ENST00000263897 SDC2P34741 201 aa12.5□□□□□ -0.41
USE1-201ENST00000263897 FHL3Q13643 280 aa12.5□□□□□ -0.41
USE1-201ENST00000263897 ECSCRQ19T08 205 aa12.5□□□□□ -0.41
USE1-201ENST00000263897 AKIRIN2Q53H80 203 aa12.5□□□□□ -0.41
USE1-201ENST00000263897 DEFB121Q5J5C9 76 aa12.5□□□□□ -0.41
USE1-201ENST00000263897 PPP1R27Q86WC6 154 aa12.5□□□□□ -0.41
USE1-201ENST00000263897 TCTEX1D1Q8N7M0 179 aa12.5□□□□□ -0.41
USE1-201ENST00000263897 OR1N2Q8NGR9 330 aa12.5□□□□□ -0.41
USE1-201ENST00000263897 GINS4Q9BRT9 223 aa12.5□□□□□ -0.41
USE1-201ENST00000263897 SLC35D1Q9NTN3 355 aa12.5□□□□□ -0.41
USE1-201ENST00000263897 ZMAT5Q9UDW3 170 aaKnown RBP12.5□□□□□ -0.41
USE1-201ENST00000263897 A0A1W2PN81 502 aa12.49□□□□□ -0.41
USE1-201ENST00000263897 DTYMKP23919 212 aa12.49□□□□□ -0.41
USE1-201ENST00000263897 CHRNA7P36544 502 aa12.49□□□□□ -0.41
USE1-201ENST00000263897 LGALS7P47929 136 aa12.49□□□□□ -0.41
USE1-201ENST00000263897 HACD4Q5VWC8 232 aa12.49□□□□□ -0.41
USE1-201ENST00000263897 SFXN4Q6P4A7 337 aa12.49□□□□□ -0.41
USE1-201ENST00000263897 H1FOOQ8IZA3 346 aaPredicted RBP12.49□□□□□ -0.41
USE1-201ENST00000263897 ABHD5Q8WTS1 349 aa12.49□□□□□ -0.41
USE1-201ENST00000263897 ST6GALNAC5Q9BVH7 336 aa12.49□□□□□ -0.41
USE1-201ENST00000263897 DCSTAMPQ9H295 470 aa12.49□□□□□ -0.41
USE1-201ENST00000263897 FOXA2Q9Y261 457 aaPredicted RBP12.49□□□□□ -0.41
USE1-201ENST00000263897 RBM7Q9Y580 266 aaKnown RBP12.49□□□□□ -0.41
USE1-201ENST00000263897 A3GALT2U3KPV4 340 aa12.49□□□□□ -0.41
USE1-201ENST00000263897 SLC25A17O43808 307 aa12.48□□□□□ -0.41
USE1-201ENST00000263897 SCGNO76038 276 aa12.48□□□□□ -0.41
USE1-201ENST00000263897 CA2P00918 260 aa12.48□□□□□ -0.41
USE1-201ENST00000263897 CLEC2LP0C7M8 214 aa12.48□□□□□ -0.41
USE1-201ENST00000263897 DGCR2P98153 550 aa12.48□□□□□ -0.41
USE1-201ENST00000263897 PITPNAQ00169 270 aa12.48□□□□□ -0.41
USE1-201ENST00000263897 TAGLNQ01995 201 aaKnown RBP12.48□□□□□ -0.41
USE1-201ENST00000263897 ZNF260Q3ZCT1 412 aa12.48□□□□□ -0.41
USE1-201ENST00000263897 KCTD21Q4G0X4 260 aa12.48□□□□□ -0.41
USE1-201ENST00000263897 C9orf66Q5T8R8 295 aa12.48□□□□□ -0.41
USE1-201ENST00000263897 UNQ5815/PRO19632Q6UWF5 114 aa12.48□□□□□ -0.41
USE1-201ENST00000263897 LFNGQ8NES3 379 aa12.48□□□□□ -0.41
USE1-201ENST00000263897 C5orf30Q96GV9 206 aa12.48□□□□□ -0.41
USE1-201ENST00000263897 OR5B12Q96R08 314 aa12.48□□□□□ -0.41
USE1-201ENST00000263897 FAM103A1Q9BTL3 118 aaKnown RBP12.48□□□□□ -0.41
USE1-201ENST00000263897 RNF167Q9H6Y7 350 aa12.48□□□□□ -0.41
USE1-201ENST00000263897 IGLV2-23P01705 113 aa12.47□□□□□ -0.41
USE1-201ENST00000263897 CRYGBP07316 175 aa12.47□□□□□ -0.41
USE1-201ENST00000263897 CTXN2P0C2S0 81 aa12.47□□□□□ -0.41
USE1-201ENST00000263897 OR8U8P0C7N1 319 aa12.47□□□□□ -0.41
USE1-201ENST00000263897 CD36P16671 472 aa12.47□□□□□ -0.41
USE1-201ENST00000263897 LUMP51884 338 aaPredicted RBP12.47□□□□□ -0.41
USE1-201ENST00000263897 GNB1P62873 340 aa12.47□□□□□ -0.41
USE1-201ENST00000263897 MXD1Q05195 221 aa12.47□□□□□ -0.41
USE1-201ENST00000263897 ZNF616Q08AN1 781 aa12.47□□□□□ -0.41
USE1-201ENST00000263897 FXYD3Q14802 87 aa12.47□□□□□ -0.41
USE1-201ENST00000263897 NEDD8Q15843 81 aa12.47□□□□□ -0.41
USE1-201ENST00000263897 ACTBL2Q562R1 376 aa12.47□□□□□ -0.41
USE1-201ENST00000263897 ASPHD1Q5U4P2 390 aa12.47□□□□□ -0.41
USE1-201ENST00000263897 BVESQ8NE79 360 aa12.47□□□□□ -0.41
USE1-201ENST00000263897 LGALS14Q8TCE9 139 aa12.47□□□□□ -0.41
USE1-201ENST00000263897 CASTOR1Q8WTX7 329 aa12.47□□□□□ -0.41
USE1-201ENST00000263897 TPSG1Q9NRR2 321 aa12.47□□□□□ -0.41
USE1-201ENST00000263897 SCOCQ9UIL1 159 aa12.47□□□□□ -0.41
USE1-201ENST00000263897 TNCP24821 2201 aa12.47□□□□□ -0.41
USE1-201ENST00000263897 SORL1Q92673 2214 aa12.46□□□□□ -0.41
USE1-201ENST00000263897 LOC100506127A0A0U1RQW1 187 aa12.46□□□□□ -0.41
USE1-201ENST00000263897 TMEM235A6NFC5 223 aa12.46□□□□□ -0.41
USE1-201ENST00000263897 SEC14L6B5MCN3 397 aa12.46□□□□□ -0.41
USE1-201ENST00000263897 ARPC1BO15143 372 aaKnown RBP12.46□□□□□ -0.41
USE1-201ENST00000263897 RAMP3O60896 148 aa12.46□□□□□ -0.41
USE1-201ENST00000263897 RRASP10301 218 aa12.46□□□□□ -0.41
USE1-201ENST00000263897 SCAND1P57086 179 aa12.46□□□□□ -0.41
USE1-201ENST00000263897 PJVKQ0ZLH3 352 aa12.46□□□□□ -0.41
USE1-201ENST00000263897 TMEM177Q53S58 311 aa12.46□□□□□ -0.41
USE1-201ENST00000263897 PYHIN1Q6K0P9 492 aa12.46□□□□□ -0.41
USE1-201ENST00000263897 NUDCD2Q8WVJ2 157 aa12.46□□□□□ -0.41
USE1-201ENST00000263897 ARPC1AQ92747 370 aa12.46□□□□□ -0.41
USE1-201ENST00000263897 ADTRPQ96IZ2 230 aa12.46□□□□□ -0.41
USE1-201ENST00000263897 RHBDL2Q9NX52 303 aa12.46□□□□□ -0.41
USE1-201ENST00000263897 SRRM4A7MD48 611 aaKnown RBP12.45□□□□□ -0.42
USE1-201ENST00000263897 SSX5O60225 188 aa12.45□□□□□ -0.42
USE1-201ENST00000263897 CNIH1O95406 144 aa12.45□□□□□ -0.42
USE1-201ENST00000263897 CD40LGP29965 261 aa12.45□□□□□ -0.42
USE1-201ENST00000263897 DUTP33316 252 aaKnown RBP12.45□□□□□ -0.42
USE1-201ENST00000263897 GNG2P59768 71 aa12.45□□□□□ -0.42
USE1-201ENST00000263897 CBX3Q13185 183 aa12.45□□□□□ -0.42
USE1-201ENST00000263897 RTL8BQ17RB0 113 aa12.45□□□□□ -0.42
USE1-201ENST00000263897 IDNKQ5T6J7 187 aa12.45□□□□□ -0.42
USE1-201ENST00000263897 CNIH2Q6PI25 160 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms