RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 FAM173AQ9BQD7 235 aa10.44□□□□□ -0.74
CHMP3-201ENST00000263856 CDH20Q9HBT6 801 aa10.44□□□□□ -0.74
CHMP3-201ENST00000263856 CTXND1A0A1B0GTU2 59 aa10.43□□□□□ -0.74
CHMP3-201ENST00000263856 SH2D1BO14796 132 aa10.43□□□□□ -0.74
CHMP3-201ENST00000263856 ST8SIA5O15466 376 aa10.43□□□□□ -0.74
CHMP3-201ENST00000263856 PSPNO60542 156 aa10.43□□□□□ -0.74
CHMP3-201ENST00000263856 NEURL1O76050 574 aa10.43□□□□□ -0.74
CHMP3-201ENST00000263856 MSMO1Q15800 293 aa10.43□□□□□ -0.74
CHMP3-201ENST00000263856 SP5Q6BEB4 398 aaPredicted RBP10.43□□□□□ -0.74
CHMP3-201ENST00000263856 Q6P435 159 aa10.43□□□□□ -0.74
CHMP3-201ENST00000263856 TGIF2LXQ8IUE1 241 aa10.43□□□□□ -0.74
CHMP3-201ENST00000263856 GALMQ96C23 342 aa10.43□□□□□ -0.74
CHMP3-201ENST00000263856 A0A1W2PPV4 95 aa10.43□□□□□ -0.74
CHMP3-201ENST00000263856 HRASP01112 189 aa10.43□□□□□ -0.74
CHMP3-201ENST00000263856 PFN1P07737 140 aaKnown RBP10.43□□□□□ -0.74
CHMP3-201ENST00000263856 OR4A8P0C604 315 aa10.43□□□□□ -0.74
CHMP3-201ENST00000263856 SLC25A6P12236 298 aa10.43□□□□□ -0.74
CHMP3-201ENST00000263856 SSTR5P35346 364 aa10.43□□□□□ -0.74
CHMP3-201ENST00000263856 ARG2P78540 354 aa10.43□□□□□ -0.74
CHMP3-201ENST00000263856 TCF23Q7RTU1 214 aa10.43□□□□□ -0.74
CHMP3-201ENST00000263856 LURAP1Q96LR2 239 aa10.43□□□□□ -0.74
CHMP3-201ENST00000263856 DCTN5Q9BTE1 182 aa10.43□□□□□ -0.74
CHMP3-201ENST00000263856 TMEM147Q9BVK8 224 aa10.43□□□□□ -0.74
CHMP3-201ENST00000263856 PSG11Q9UQ72 335 aa10.43□□□□□ -0.74
CHMP3-201ENST00000263856 NDUFB4O95168 129 aa10.42□□□□□ -0.74
CHMP3-201ENST00000263856 COL8A2P25067 703 aa10.42□□□□□ -0.74
CHMP3-201ENST00000263856 CDC34P49427 236 aaPredicted RBP10.42□□□□□ -0.74
CHMP3-201ENST00000263856 GTF3AQ92664 365 aaKnown RBP10.42□□□□□ -0.74
CHMP3-201ENST00000263856 TMEM45BQ96B21 275 aa10.42□□□□□ -0.74
CHMP3-201ENST00000263856 CBLN4Q9NTU7 201 aa10.42□□□□□ -0.74
CHMP3-201ENST00000263856 GRIFINA4D1Z8 144 aa10.42□□□□□ -0.74
CHMP3-201ENST00000263856 HAND1O96004 215 aa10.42□□□□□ -0.74
CHMP3-201ENST00000263856 THBS3P49746 956 aa10.42□□□□□ -0.74
CHMP3-201ENST00000263856 SSPNQ14714 243 aa10.42□□□□□ -0.74
CHMP3-201ENST00000263856 JOSD1Q15040 202 aaPredicted RBP10.42□□□□□ -0.74
CHMP3-201ENST00000263856 VKORC1L1Q8N0U8 176 aa10.42□□□□□ -0.74
CHMP3-201ENST00000263856 NEIL1Q96FI4 390 aaPredicted RBP10.42□□□□□ -0.74
CHMP3-201ENST00000263856 TMEM242Q9NWH2 141 aa10.42□□□□□ -0.74
CHMP3-201ENST00000263856 NTN3O00634 580 aaPredicted RBP10.42□□□□□ -0.74
CHMP3-201ENST00000263856 SLC31A2O15432 143 aa10.42□□□□□ -0.74
CHMP3-201ENST00000263856 TGOLN2O43493 480 aa10.42□□□□□ -0.74
CHMP3-201ENST00000263856 CYC1P08574 325 aa10.42□□□□□ -0.74
CHMP3-201ENST00000263856 C1QTNF9P0C862 333 aa10.42□□□□□ -0.74
CHMP3-201ENST00000263856 NUBP1P53384 320 aa10.42□□□□□ -0.74
CHMP3-201ENST00000263856 UBE2NP61088 152 aaKnown RBP10.42□□□□□ -0.74
CHMP3-201ENST00000263856 SRSF7Q16629 238 aaKnown RBP eCLIP10.42□□□□□ -0.74
CHMP3-201ENST00000263856 TBC1D28Q2M2D7 210 aa10.42□□□□□ -0.74
CHMP3-201ENST00000263856 PRAMEF6Q5VXH4 476 aa10.42□□□□□ -0.74
CHMP3-201ENST00000263856 CYB5R2Q6BCY4 276 aa10.42□□□□□ -0.74
CHMP3-201ENST00000263856 ZNF497Q6ZNH5 498 aa10.42□□□□□ -0.74
CHMP3-201ENST00000263856 SLC25A40Q8TBP6 338 aa10.42□□□□□ -0.74
CHMP3-201ENST00000263856 NPCDR1Q9BY65 106 aa10.42□□□□□ -0.74
CHMP3-201ENST00000263856 CEP250Q9BV73 2442 aa10.42□□□□□ -0.74
CHMP3-201ENST00000263856 RNF212BA8MTL3 300 aa10.41□□□□□ -0.74
CHMP3-201ENST00000263856 C12orf77C9JDV5 145 aa10.41□□□□□ -0.74
CHMP3-201ENST00000263856 HBZP02008 142 aa10.41□□□□□ -0.74
CHMP3-201ENST00000263856 PPP1CBP62140 327 aa10.41□□□□□ -0.74
CHMP3-201ENST00000263856 CATR1Q13166 79 aa10.41□□□□□ -0.74
CHMP3-201ENST00000263856 TMEM18Q96B42 140 aa10.41□□□□□ -0.74
CHMP3-201ENST00000263856 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.41□□□□□ -0.74
CHMP3-201ENST00000263856 POLDIP2Q9Y2S7 368 aa10.41□□□□□ -0.74
CHMP3-201ENST00000263856 TRAPPC1Q9Y5R8 145 aa10.41□□□□□ -0.74
CHMP3-201ENST00000263856 LRRC30A6NM36 301 aa10.41□□□□□ -0.74
CHMP3-201ENST00000263856 AGFG2O95081 481 aa10.41□□□□□ -0.74
CHMP3-201ENST00000263856 IL18BPO95998 194 aa10.41□□□□□ -0.74
CHMP3-201ENST00000263856 IGHEP01854 428 aa10.41□□□□□ -0.74
CHMP3-201ENST00000263856 KCNIP4Q6PIL6 250 aa10.41□□□□□ -0.74
CHMP3-201ENST00000263856 DDA1Q9BW61 102 aa10.41□□□□□ -0.74
CHMP3-201ENST00000263856 HINT2Q9BX68 163 aa10.41□□□□□ -0.74
CHMP3-201ENST00000263856 SPINK4O60575 86 aa10.4□□□□□ -0.74
CHMP3-201ENST00000263856 HOXA6P31267 233 aa10.4□□□□□ -0.74
CHMP3-201ENST00000263856 MEOX1P50221 254 aa10.4□□□□□ -0.74
CHMP3-201ENST00000263856 ATP1A1-AS1Q5TC04 95 aa10.4□□□□□ -0.74
CHMP3-201ENST00000263856 TMEM14EPQ6UXP3 125 aa10.4□□□□□ -0.74
CHMP3-201ENST00000263856 LINC00596Q86U02 117 aa10.4□□□□□ -0.74
CHMP3-201ENST00000263856 LINC00470Q9BZP3 86 aa10.4□□□□□ -0.74
CHMP3-201ENST00000263856 MSL2Q9HCI7 577 aa10.4□□□□□ -0.74
CHMP3-201ENST00000263856 ABI3Q9P2A4 366 aa10.4□□□□□ -0.74
CHMP3-201ENST00000263856 EREGO14944 169 aa10.4□□□□□ -0.74
CHMP3-201ENST00000263856 FABP6P51161 128 aa10.4□□□□□ -0.74
CHMP3-201ENST00000263856 TRA2AQ13595 282 aaKnown RBP eCLIP10.4□□□□□ -0.74
CHMP3-201ENST00000263856 TMEM256Q8N2U0 113 aa10.4□□□□□ -0.74
CHMP3-201ENST00000263856 ZNF645Q8N7E2 425 aa10.4□□□□□ -0.74
CHMP3-201ENST00000263856 CNEP1R1Q8N9A8 125 aa10.4□□□□□ -0.74
CHMP3-201ENST00000263856 SSMEM1Q8WWF3 244 aa10.4□□□□□ -0.74
CHMP3-201ENST00000263856 HCFC1P51610 2035 aa10.4□□□□□ -0.74
CHMP3-201ENST00000263856 IGKV3D-15A0A087WSY6 115 aa10.4□□□□□ -0.75
CHMP3-201ENST00000263856 PIGBOS1A0A0B4J2F0 54 aa10.4□□□□□ -0.75
CHMP3-201ENST00000263856 DVL1O14640 695 aa10.4□□□□□ -0.75
CHMP3-201ENST00000263856 FCGR3BO75015 233 aa10.4□□□□□ -0.75
CHMP3-201ENST00000263856 CER1O95813 267 aa10.4□□□□□ -0.75
CHMP3-201ENST00000263856 SELLP14151 372 aa10.4□□□□□ -0.75
CHMP3-201ENST00000263856 BATFQ16520 125 aa10.4□□□□□ -0.75
CHMP3-201ENST00000263856 MOB1BQ7L9L4 216 aa10.4□□□□□ -0.75
CHMP3-201ENST00000263856 NANOS1Q8WY41 292 aaKnown RBP10.4□□□□□ -0.75
CHMP3-201ENST00000263856 C5orf30Q96GV9 206 aa10.4□□□□□ -0.75
CHMP3-201ENST00000263856 IMMP2LQ96T52 175 aa10.4□□□□□ -0.75
CHMP3-201ENST00000263856 QTRT1Q9BXR0 403 aaKnown RBP10.4□□□□□ -0.75
CHMP3-201ENST00000263856 FOXJ2Q9P0K8 574 aa10.4□□□□□ -0.75
CHMP3-201ENST00000263856 METRNQ9UJH8 293 aa10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms