RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 ADAMTS20P59510 1910 aa12.65□□□□□ -0.38
XRCC1-201ENST00000262887 AQP7O14520 342 aa12.65□□□□□ -0.38
XRCC1-201ENST00000262887 WDR1O75083 606 aa12.65□□□□□ -0.38
XRCC1-201ENST00000262887 SERF1AO75920 110 aa12.65□□□□□ -0.38
XRCC1-201ENST00000262887 NDUFB8O95169 186 aa12.65□□□□□ -0.38
XRCC1-201ENST00000262887 DEFA4P12838 97 aa12.65□□□□□ -0.38
XRCC1-201ENST00000262887 LINC00310P59036 64 aa12.65□□□□□ -0.38
XRCC1-201ENST00000262887 PRDM14Q9GZV8 571 aa12.65□□□□□ -0.38
XRCC1-201ENST00000262887 ABCA7Q8IZY2 2146 aa12.65□□□□□ -0.38
XRCC1-201ENST00000262887 MDFIC2A0A1B0GVS7 189 aa12.65□□□□□ -0.38
XRCC1-201ENST00000262887 CBY3A6NI87 242 aa12.65□□□□□ -0.38
XRCC1-201ENST00000262887 HSBP1L1C9JCN9 74 aa12.65□□□□□ -0.38
XRCC1-201ENST00000262887 FAM90A26D6RGX4 464 aa12.65□□□□□ -0.38
XRCC1-201ENST00000262887 DEGS1O15121 323 aa12.65□□□□□ -0.38
XRCC1-201ENST00000262887 SYNGR1O43759 233 aa12.65□□□□□ -0.38
XRCC1-201ENST00000262887 NDUFB4O95168 129 aa12.65□□□□□ -0.38
XRCC1-201ENST00000262887 CRISP2P16562 243 aa12.65□□□□□ -0.38
XRCC1-201ENST00000262887 EPHA8P29322 1005 aaPredicted RBP12.65□□□□□ -0.38
XRCC1-201ENST00000262887 MLF1P58340 268 aa12.65□□□□□ -0.38
XRCC1-201ENST00000262887 RAC3P60763 192 aa12.65□□□□□ -0.38
XRCC1-201ENST00000262887 CEACAM21Q3KPI0 293 aa12.65□□□□□ -0.38
XRCC1-201ENST00000262887 GJE1A6NN92 205 aa12.64□□□□□ -0.39
XRCC1-201ENST00000262887 ZNHIT1O43257 154 aa12.64□□□□□ -0.39
XRCC1-201ENST00000262887 KRASP01116 189 aa12.64□□□□□ -0.39
XRCC1-201ENST00000262887 LHX2P50458 406 aa12.64□□□□□ -0.39
XRCC1-201ENST00000262887 ZNF709Q8N972 641 aa12.64□□□□□ -0.39
XRCC1-201ENST00000262887 ZNF488Q96MN9 340 aa12.64□□□□□ -0.39
XRCC1-201ENST00000262887 DERL1Q9BUN8 251 aa12.64□□□□□ -0.39
XRCC1-201ENST00000262887 PGPEP1LA6NFU8 196 aa12.64□□□□□ -0.39
XRCC1-201ENST00000262887 BMP5P22003 454 aa12.64□□□□□ -0.39
XRCC1-201ENST00000262887 TFF3Q07654 80 aa12.64□□□□□ -0.39
XRCC1-201ENST00000262887 UBE2V1Q13404 147 aa12.64□□□□□ -0.39
XRCC1-201ENST00000262887 VHLLQ6RSH7 139 aa12.64□□□□□ -0.39
XRCC1-201ENST00000262887 FGFRL1Q8N441 504 aa12.64□□□□□ -0.39
XRCC1-201ENST00000262887 ZNF114Q8NC26 417 aa12.64□□□□□ -0.39
XRCC1-201ENST00000262887 OR5P3Q8WZ94 311 aa12.64□□□□□ -0.39
XRCC1-201ENST00000262887 CIB3Q96Q77 187 aaPredicted RBP12.64□□□□□ -0.39
XRCC1-201ENST00000262887 SAMD10Q9BYL1 202 aa12.64□□□□□ -0.39
XRCC1-201ENST00000262887 WIPI2Q9Y4P8 454 aa12.64□□□□□ -0.39
XRCC1-201ENST00000262887 KIAA1549Q9HCM3 1950 aa12.64□□□□□ -0.39
XRCC1-201ENST00000262887 TRBV6-6A0A0A6YYG2 114 aa12.63□□□□□ -0.39
XRCC1-201ENST00000262887 F6UZH7 168 aa12.63□□□□□ -0.39
XRCC1-201ENST00000262887 TRAPPC6AO75865 159 aa12.63□□□□□ -0.39
XRCC1-201ENST00000262887 IGHEP01854 428 aa12.63□□□□□ -0.39
XRCC1-201ENST00000262887 KITLGP21583 273 aa12.63□□□□□ -0.39
XRCC1-201ENST00000262887 IGFBP4P22692 258 aa12.63□□□□□ -0.39
XRCC1-201ENST00000262887 ATP5G3P48201 142 aa12.63□□□□□ -0.39
XRCC1-201ENST00000262887 CDC34P49427 236 aaPredicted RBP12.63□□□□□ -0.39
XRCC1-201ENST00000262887 UBE2G2P60604 165 aa12.63□□□□□ -0.39
XRCC1-201ENST00000262887 NPCDR1Q9BY65 106 aa12.63□□□□□ -0.39
XRCC1-201ENST00000262887 PROK2Q9HC23 129 aa12.63□□□□□ -0.39
XRCC1-201ENST00000262887 LOC105371242A0A075B767 164 aa12.63□□□□□ -0.39
XRCC1-201ENST00000262887 TRAV39A0A0B4J263 110 aa12.63□□□□□ -0.39
XRCC1-201ENST00000262887 TRAV24A0A0B4J272 114 aa12.63□□□□□ -0.39
XRCC1-201ENST00000262887 ZNF716A6NP11 495 aa12.63□□□□□ -0.39
XRCC1-201ENST00000262887 RBFOX2O43251 390 aaKnown RBP eCLIP12.63□□□□□ -0.39
XRCC1-201ENST00000262887 SPINK2P20155 84 aa12.63□□□□□ -0.39
XRCC1-201ENST00000262887 CBLN1P23435 193 aa12.63□□□□□ -0.39
XRCC1-201ENST00000262887 COMPP49747 757 aaPredicted RBP12.63□□□□□ -0.39
XRCC1-201ENST00000262887 SYT13Q7L8C5 426 aa12.63□□□□□ -0.39
XRCC1-201ENST00000262887 MRPL21Q7Z2W9 205 aaKnown RBP12.63□□□□□ -0.39
XRCC1-201ENST00000262887 OR4B1Q8NGF8 309 aa12.63□□□□□ -0.39
XRCC1-201ENST00000262887 SEPSECSQ9HD40 501 aaKnown RBP12.63□□□□□ -0.39
XRCC1-201ENST00000262887 RARRES3Q9UL19 164 aa12.63□□□□□ -0.39
XRCC1-201ENST00000262887 PPIAL4AQ9Y536 164 aa12.63□□□□□ -0.39
XRCC1-201ENST00000262887 MMDQ15546 238 aa12.62□□□□□ -0.39
XRCC1-201ENST00000262887 HLA-BQ31612 363 aa12.62□□□□□ -0.39
XRCC1-201ENST00000262887 BAGE3Q86Y29 109 aa12.62□□□□□ -0.39
XRCC1-201ENST00000262887 BAGE2Q86Y30 109 aa12.62□□□□□ -0.39
XRCC1-201ENST00000262887 STPG4Q8N801 248 aa12.62□□□□□ -0.39
XRCC1-201ENST00000262887 OR10P1Q8NGE3 313 aa12.62□□□□□ -0.39
XRCC1-201ENST00000262887 KCNIP2Q9NS61 270 aa12.62□□□□□ -0.39
XRCC1-201ENST00000262887 CLN8Q9UBY8 286 aa12.62□□□□□ -0.39
XRCC1-201ENST00000262887 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.62□□□□□ -0.39
XRCC1-201ENST00000262887 DNPH1O43598 174 aa12.62□□□□□ -0.39
XRCC1-201ENST00000262887 CCL2P13500 99 aa12.62□□□□□ -0.39
XRCC1-201ENST00000262887 RPS16P62249 146 aaKnown RBP12.62□□□□□ -0.39
XRCC1-201ENST00000262887 COLCA1Q6ZS62 124 aa12.62□□□□□ -0.39
XRCC1-201ENST00000262887 LINC00596Q86U02 117 aa12.62□□□□□ -0.39
XRCC1-201ENST00000262887 SLC25A45Q8N413 288 aa12.62□□□□□ -0.39
XRCC1-201ENST00000262887 UBALD1Q8TB05 177 aa12.62□□□□□ -0.39
XRCC1-201ENST00000262887 MRPL18Q9H0U6 180 aaKnown RBP12.62□□□□□ -0.39
XRCC1-201ENST00000262887 AKIRIN1Q9H9L7 192 aaPredicted RBP12.62□□□□□ -0.39
XRCC1-201ENST00000262887 C3orf80F5H4A9 247 aa12.61□□□□□ -0.39
XRCC1-201ENST00000262887 IGHV3-9P01782 118 aa12.61□□□□□ -0.39
XRCC1-201ENST00000262887 SERPINA7P05543 415 aa12.61□□□□□ -0.39
XRCC1-201ENST00000262887 OR5G3P0C626 314 aa12.61□□□□□ -0.39
XRCC1-201ENST00000262887 OR1L1Q8NH94 360 aa12.61□□□□□ -0.39
XRCC1-201ENST00000262887 HSPB7Q9UBY9 170 aa12.61□□□□□ -0.39
XRCC1-201ENST00000262887 ZNF407Q9C0G0 2248 aa12.61□□□□□ -0.39
XRCC1-201ENST00000262887 CXCL13O43927 109 aa12.61□□□□□ -0.39
XRCC1-201ENST00000262887 ZNF90Q03938 601 aa12.61□□□□□ -0.39
XRCC1-201ENST00000262887 SLC23A3Q6PIS1 610 aa12.61□□□□□ -0.39
XRCC1-201ENST00000262887 YRDCQ86U90 279 aaKnown RBP12.61□□□□□ -0.39
XRCC1-201ENST00000262887 DLL3Q9NYJ7 618 aa12.61□□□□□ -0.39
XRCC1-201ENST00000262887 TMEM238C9JI98 176 aa12.61□□□□□ -0.39
XRCC1-201ENST00000262887 NPIPB11E5RHQ5 1161 aa12.61□□□□□ -0.39
XRCC1-201ENST00000262887 C17orf112F2Z3M2 114 aa12.61□□□□□ -0.39
XRCC1-201ENST00000262887 SYNGR4O95473 234 aa12.61□□□□□ -0.39
XRCC1-201ENST00000262887 PCOLCEQ15113 449 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms