RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 MBD2Q9UBB5 411 aa13.64□□□□□ -0.23
SDCBP-201ENST00000260130 DSCAML1Q8TD84 2053 aa13.63□□□□□ -0.23
SDCBP-201ENST00000260130 DNAJC9-AS1A6NH13 148 aa13.63□□□□□ -0.23
SDCBP-201ENST00000260130 DBX1A6NMT0 343 aa13.63□□□□□ -0.23
SDCBP-201ENST00000260130 SSX5O60225 188 aa13.63□□□□□ -0.23
SDCBP-201ENST00000260130 FBP1P09467 338 aa13.63□□□□□ -0.23
SDCBP-201ENST00000260130 OMGP23515 440 aa13.63□□□□□ -0.23
SDCBP-201ENST00000260130 KRTAP24-1Q3LI83 254 aa13.63□□□□□ -0.23
SDCBP-201ENST00000260130 PRAMEF5Q5TYX0 476 aa13.63□□□□□ -0.23
SDCBP-201ENST00000260130 OR11H6Q8NGC7 330 aa13.63□□□□□ -0.23
SDCBP-201ENST00000260130 MRGPRDQ8TDS7 321 aa13.63□□□□□ -0.23
SDCBP-201ENST00000260130 NICN1Q9BSH3 213 aa13.63□□□□□ -0.23
SDCBP-201ENST00000260130 LPAR5Q9H1C0 372 aa13.63□□□□□ -0.23
SDCBP-201ENST00000260130 TRAV39A0A0B4J263 110 aa13.62□□□□□ -0.23
SDCBP-201ENST00000260130 RNF212BA8MTL3 300 aa13.62□□□□□ -0.23
SDCBP-201ENST00000260130 PMP2P02689 132 aa13.62□□□□□ -0.23
SDCBP-201ENST00000260130 NAT1P18440 290 aa13.62□□□□□ -0.23
SDCBP-201ENST00000260130 GZMHP20718 246 aa13.62□□□□□ -0.23
SDCBP-201ENST00000260130 LGALS4P56470 323 aa13.62□□□□□ -0.23
SDCBP-201ENST00000260130 TMEM128Q5BJH2 165 aa13.62□□□□□ -0.23
SDCBP-201ENST00000260130 NKAPLQ5M9Q1 402 aa13.62□□□□□ -0.23
SDCBP-201ENST00000260130 ATRAIDQ6UW56 229 aa13.62□□□□□ -0.23
SDCBP-201ENST00000260130 TERB2Q8NHR7 220 aa13.62□□□□□ -0.23
SDCBP-201ENST00000260130 STOML3Q8TAV4 291 aa13.62□□□□□ -0.23
SDCBP-201ENST00000260130 DUX5Q96PT3 197 aa13.62□□□□□ -0.23
SDCBP-201ENST00000260130 CALYQ9NYX4 217 aa13.62□□□□□ -0.23
SDCBP-201ENST00000260130 ANAPC10Q9UM13 185 aa13.62□□□□□ -0.23
SDCBP-201ENST00000260130 DNASE2O00115 360 aaPredicted RBP13.62□□□□□ -0.23
SDCBP-201ENST00000260130 HOXA3O43365 443 aaPredicted RBP13.62□□□□□ -0.23
SDCBP-201ENST00000260130 CA11O75493 328 aa13.62□□□□□ -0.23
SDCBP-201ENST00000260130 CHATP28329 748 aa13.62□□□□□ -0.23
SDCBP-201ENST00000260130 SLC9A3R2Q15599 337 aa13.62□□□□□ -0.23
SDCBP-201ENST00000260130 FAM89BQ8N5H3 189 aa13.62□□□□□ -0.23
SDCBP-201ENST00000260130 ARRDC1Q8N5I2 433 aa13.62□□□□□ -0.23
SDCBP-201ENST00000260130 MARCH1Q8TCQ1 289 aa13.62□□□□□ -0.23
SDCBP-201ENST00000260130 RAB3CQ96E17 227 aa13.62□□□□□ -0.23
SDCBP-201ENST00000260130 NARS2Q96I59 477 aaKnown RBP13.62□□□□□ -0.23
SDCBP-201ENST00000260130 SCGB3A2Q96PL1 93 aa13.62□□□□□ -0.23
SDCBP-201ENST00000260130 NKX6-2Q9C056 277 aaPredicted RBP13.62□□□□□ -0.23
SDCBP-201ENST00000260130 LINC00574Q9H8X3 128 aa13.62□□□□□ -0.23
SDCBP-201ENST00000260130 A0A0A6YYD4 124 aa13.61□□□□□ -0.23
SDCBP-201ENST00000260130 IGHV2-26A0A0B4J1V2 119 aa13.61□□□□□ -0.23
SDCBP-201ENST00000260130 C13orf42A0A1B0GVH6 325 aa13.61□□□□□ -0.23
SDCBP-201ENST00000260130 CLDN34H7C241 214 aa13.61□□□□□ -0.23
SDCBP-201ENST00000260130 ARG1P05089 322 aa13.61□□□□□ -0.23
SDCBP-201ENST00000260130 TPT1P13693 172 aaKnown RBP13.61□□□□□ -0.23
SDCBP-201ENST00000260130 BLVRBP30043 206 aaPredicted RBP13.61□□□□□ -0.23
SDCBP-201ENST00000260130 PNLIPRP3Q17RR3 467 aa13.61□□□□□ -0.23
SDCBP-201ENST00000260130 VAX1Q5SQQ9 334 aa13.61□□□□□ -0.23
SDCBP-201ENST00000260130 GAPTQ8N292 157 aa13.61□□□□□ -0.23
SDCBP-201ENST00000260130 CLRN3Q8NCR9 226 aa13.61□□□□□ -0.23
SDCBP-201ENST00000260130 OR5AP2Q8NGF4 316 aa13.61□□□□□ -0.23
SDCBP-201ENST00000260130 DCUN1D4Q92564 292 aa13.61□□□□□ -0.23
SDCBP-201ENST00000260130 DYRK2Q92630 601 aa13.61□□□□□ -0.23
SDCBP-201ENST00000260130 COL6A5A8TX70 2615 aa13.61□□□□□ -0.23
SDCBP-201ENST00000260130 TRBV6-7A0A0A0MS04 114 aa13.61□□□□□ -0.23
SDCBP-201ENST00000260130 TEX13DA0A0J9YY54 714 aaPredicted RBP13.61□□□□□ -0.23
SDCBP-201ENST00000260130 ODF3BA8MYP8 253 aa13.61□□□□□ -0.23
SDCBP-201ENST00000260130 NPIPB11E5RHQ5 1161 aa13.61□□□□□ -0.23
SDCBP-201ENST00000260130 CBX5P45973 191 aa13.61□□□□□ -0.23
SDCBP-201ENST00000260130 C6orf201Q7Z4U5 140 aa13.61□□□□□ -0.23
SDCBP-201ENST00000260130 LDLRAD3Q86YD5 345 aa13.61□□□□□ -0.23
SDCBP-201ENST00000260130 ABHD12Q8N2K0 398 aa13.61□□□□□ -0.23
SDCBP-201ENST00000260130 AJUBAQ96IF1 538 aa13.61□□□□□ -0.23
SDCBP-201ENST00000260130 FAAP24Q9BTP7 215 aa13.61□□□□□ -0.23
SDCBP-201ENST00000260130 CLEC7AQ9BXN2 247 aa13.61□□□□□ -0.23
SDCBP-201ENST00000260130 A0A0B4J2A0 478 aa13.6□□□□□ -0.23
SDCBP-201ENST00000260130 NUDT19A8MXV4 375 aa13.6□□□□□ -0.23
SDCBP-201ENST00000260130 SOCS1O15524 211 aa13.6□□□□□ -0.23
SDCBP-201ENST00000260130 FGF16O43320 207 aa13.6□□□□□ -0.23
SDCBP-201ENST00000260130 PGAM2P15259 253 aa13.6□□□□□ -0.23
SDCBP-201ENST00000260130 HIST1H1DP16402 221 aaKnown RBP13.6□□□□□ -0.23
SDCBP-201ENST00000260130 SSTR5P35346 364 aa13.6□□□□□ -0.23
SDCBP-201ENST00000260130 OR56B1Q8NGI3 324 aa13.6□□□□□ -0.23
SDCBP-201ENST00000260130 RFESDQ8TAC1 157 aa13.6□□□□□ -0.23
SDCBP-201ENST00000260130 FAM216AQ8WUB2 273 aa13.6□□□□□ -0.23
SDCBP-201ENST00000260130 SSMEM1Q8WWF3 244 aa13.6□□□□□ -0.23
SDCBP-201ENST00000260130 KIRREL1Q96J84 757 aa13.6□□□□□ -0.23
SDCBP-201ENST00000260130 CYYR1Q96J86 154 aa13.6□□□□□ -0.23
SDCBP-201ENST00000260130 SULT4A1Q9BR01 284 aa13.6□□□□□ -0.23
SDCBP-201ENST00000260130 PLEKHJ1Q9NW61 149 aa13.6□□□□□ -0.23
SDCBP-201ENST00000260130 SHPKQ9UHJ6 478 aa13.6□□□□□ -0.23
SDCBP-201ENST00000260130 TRAPPC2LQ9UL33 140 aa13.6□□□□□ -0.23
SDCBP-201ENST00000260130 RTN4RL2Q86UN3 420 aa13.59□□□□□ -0.23
SDCBP-201ENST00000260130 TMEM86BQ8N661 226 aa13.59□□□□□ -0.23
SDCBP-201ENST00000260130 OR1S2Q8NGQ3 325 aa13.59□□□□□ -0.23
SDCBP-201ENST00000260130 RAB18Q9NP72 206 aa13.59□□□□□ -0.23
SDCBP-201ENST00000260130 IDI2-AS1Q9NZ38 188 aa13.59□□□□□ -0.23
SDCBP-201ENST00000260130 ZNRD1Q9P1U0 126 aa13.59□□□□□ -0.23
SDCBP-201ENST00000260130 GPR132Q9UNW8 380 aa13.59□□□□□ -0.23
SDCBP-201ENST00000260130 TBL2Q9Y4P3 447 aaKnown RBP13.59□□□□□ -0.23
SDCBP-201ENST00000260130 POMT1Q9Y6A1 747 aa13.59□□□□□ -0.23
SDCBP-201ENST00000260130 A0A087X0M5 115 aa13.59□□□□□ -0.23
SDCBP-201ENST00000260130 A0A1B0GX30 115 aa13.59□□□□□ -0.23
SDCBP-201ENST00000260130 ATG12O94817 140 aa13.59□□□□□ -0.23
SDCBP-201ENST00000260130 NFYBP25208 207 aa13.59□□□□□ -0.23
SDCBP-201ENST00000260130 IER3P46695 156 aa13.59□□□□□ -0.23
SDCBP-201ENST00000260130 LHFPL4Q7Z7J7 247 aa13.59□□□□□ -0.23
SDCBP-201ENST00000260130 BEND2Q8NDZ0 799 aa13.59□□□□□ -0.23
SDCBP-201ENST00000260130 OR10A7Q8NGE5 316 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms