RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 CABLES2Q9BTV7 478 aa11.35□□□□□ -0.59
PRPF38A-201ENST00000257181 PLSCR2Q9NRY7 297 aa11.35□□□□□ -0.59
PRPF38A-201ENST00000257181 KLK11Q9UBX7 282 aa11.35□□□□□ -0.59
PRPF38A-201ENST00000257181 TMEM178BH3BS89 294 aa11.35□□□□□ -0.59
PRPF38A-201ENST00000257181 PDE6DO43924 150 aa11.35□□□□□ -0.59
PRPF38A-201ENST00000257181 HERPUD1Q15011 391 aa11.35□□□□□ -0.59
PRPF38A-201ENST00000257181 DAZAP2Q15038 168 aaPredicted RBP11.35□□□□□ -0.59
PRPF38A-201ENST00000257181 LPAR5Q9H1C0 372 aa11.35□□□□□ -0.59
PRPF38A-201ENST00000257181 DCTN6O00399 190 aa11.35□□□□□ -0.59
PRPF38A-201ENST00000257181 CCSO14618 274 aa11.35□□□□□ -0.59
PRPF38A-201ENST00000257181 RBFOX2O43251 390 aaKnown RBP eCLIP11.35□□□□□ -0.59
PRPF38A-201ENST00000257181 PI3P19957 117 aa11.35□□□□□ -0.59
PRPF38A-201ENST00000257181 RND3P61587 244 aa11.35□□□□□ -0.59
PRPF38A-201ENST00000257181 LINC01590Q5TEZ4 76 aa11.35□□□□□ -0.59
PRPF38A-201ENST00000257181 LEMD1Q68G75 181 aa11.35□□□□□ -0.59
PRPF38A-201ENST00000257181 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.35□□□□□ -0.59
PRPF38A-201ENST00000257181 PPP1R1CQ8WVI7 109 aa11.35□□□□□ -0.59
PRPF38A-201ENST00000257181 NCOR1P1Q9H4R4 102 aa11.35□□□□□ -0.59
PRPF38A-201ENST00000257181 KLHDC2Q9Y2U9 406 aa11.35□□□□□ -0.59
PRPF38A-201ENST00000257181 LTBP2Q14767 1821 aa11.34□□□□□ -0.59
PRPF38A-201ENST00000257181 REG1BP48304 166 aa11.34□□□□□ -0.59
PRPF38A-201ENST00000257181 GAS1P54826 345 aa11.34□□□□□ -0.59
PRPF38A-201ENST00000257181 DHRS2Q13268 280 aa11.34□□□□□ -0.59
PRPF38A-201ENST00000257181 LCN15Q6UWW0 184 aa11.34□□□□□ -0.59
PRPF38A-201ENST00000257181 ZNF488Q96MN9 340 aa11.34□□□□□ -0.59
PRPF38A-201ENST00000257181 ZNF250P15622 560 aa11.34□□□□□ -0.59
PRPF38A-201ENST00000257181 ZNF660Q6AZW8 331 aaPredicted RBP11.34□□□□□ -0.59
PRPF38A-201ENST00000257181 ZNF738Q8NE65 137 aa11.34□□□□□ -0.59
PRPF38A-201ENST00000257181 UBALD1Q8TB05 177 aa11.34□□□□□ -0.59
PRPF38A-201ENST00000257181 TMEM140Q9NV12 185 aa11.34□□□□□ -0.59
PRPF38A-201ENST00000257181 GOLT1BQ9Y3E0 138 aa11.34□□□□□ -0.59
PRPF38A-201ENST00000257181 GATCO43716 136 aaKnown RBP11.34□□□□□ -0.59
PRPF38A-201ENST00000257181 SERF2P84101 59 aa11.34□□□□□ -0.59
PRPF38A-201ENST00000257181 LRRTM1Q86UE6 522 aa11.34□□□□□ -0.59
PRPF38A-201ENST00000257181 DTX2Q86UW9 622 aa11.34□□□□□ -0.59
PRPF38A-201ENST00000257181 PUS1Q9Y606 427 aaKnown RBP eCLIP11.34□□□□□ -0.59
PRPF38A-201ENST00000257181 SLC25A17O43808 307 aa11.34□□□□□ -0.59
PRPF38A-201ENST00000257181 G6PCP35575 357 aa11.34□□□□□ -0.59
PRPF38A-201ENST00000257181 TMEM50BP56557 158 aa11.34□□□□□ -0.59
PRPF38A-201ENST00000257181 SRSF8Q9BRL6 282 aaKnown RBP11.34□□□□□ -0.59
PRPF38A-201ENST00000257181 TMEM222Q9H0R3 208 aa11.34□□□□□ -0.59
PRPF38A-201ENST00000257181 PSMB11A5LHX3 300 aa11.33□□□□□ -0.6
PRPF38A-201ENST00000257181 ETV2O00321 342 aaPredicted RBP11.33□□□□□ -0.6
PRPF38A-201ENST00000257181 SEC11BP0C7V7 166 aa11.33□□□□□ -0.6
PRPF38A-201ENST00000257181 RAB5AP20339 215 aa11.33□□□□□ -0.6
PRPF38A-201ENST00000257181 DLK1P80370 383 aa11.33□□□□□ -0.6
PRPF38A-201ENST00000257181 CLEC9AQ6UXN8 241 aa11.33□□□□□ -0.6
PRPF38A-201ENST00000257181 OR5C1Q8NGR4 320 aa11.33□□□□□ -0.6
PRPF38A-201ENST00000257181 USMG5Q96IX5 58 aa11.33□□□□□ -0.6
PRPF38A-201ENST00000257181 SMIM7Q9BQ49 75 aa11.33□□□□□ -0.6
PRPF38A-201ENST00000257181 AICDAQ9GZX7 198 aa11.33□□□□□ -0.6
PRPF38A-201ENST00000257181 TLNRD1Q9H1K6 362 aa11.33□□□□□ -0.6
PRPF38A-201ENST00000257181 IGKV1D-33P01593 117 aa11.33□□□□□ -0.6
PRPF38A-201ENST00000257181 IGKV1-33P01594 117 aa11.33□□□□□ -0.6
PRPF38A-201ENST00000257181 PSG2P11465 335 aa11.33□□□□□ -0.6
PRPF38A-201ENST00000257181 CD33P20138 364 aa11.33□□□□□ -0.6
PRPF38A-201ENST00000257181 PPP1R1AQ13522 171 aa11.33□□□□□ -0.6
PRPF38A-201ENST00000257181 ZNF257Q9Y2Q1 563 aa11.33□□□□□ -0.6
PRPF38A-201ENST00000257181 CHD5Q8TDI0 1954 aa11.33□□□□□ -0.6
PRPF38A-201ENST00000257181 MAP1LC3B2A6NCE7 125 aa11.33□□□□□ -0.6
PRPF38A-201ENST00000257181 PYCARD-AS1I3L0S3 204 aa11.33□□□□□ -0.6
PRPF38A-201ENST00000257181 PAX1P15863 534 aa11.33□□□□□ -0.6
PRPF38A-201ENST00000257181 USF2Q15853 346 aaPredicted RBP11.33□□□□□ -0.6
PRPF38A-201ENST00000257181 UQCC3Q6UW78 93 aa11.33□□□□□ -0.6
PRPF38A-201ENST00000257181 LRRC75A-AS1Q8N1F1 130 aa11.33□□□□□ -0.6
PRPF38A-201ENST00000257181 MAP1LC3BQ9GZQ8 125 aa11.33□□□□□ -0.6
PRPF38A-201ENST00000257181 THY1P04216 161 aa11.33□□□□□ -0.6
PRPF38A-201ENST00000257181 CD99P14209 185 aa11.33□□□□□ -0.6
PRPF38A-201ENST00000257181 MYPOPQ86VE0 399 aaPredicted RBP11.33□□□□□ -0.6
PRPF38A-201ENST00000257181 EIF4E3Q8N5X7 224 aaKnown RBP11.33□□□□□ -0.6
PRPF38A-201ENST00000257181 OR10AC1Q8NH08 325 aa11.33□□□□□ -0.6
PRPF38A-201ENST00000257181 PPP5D1E7EU14 171 aa11.32□□□□□ -0.6
PRPF38A-201ENST00000257181 SLC6A1P30531 599 aa11.32□□□□□ -0.6
PRPF38A-201ENST00000257181 WDR25Q64LD2 544 aaPredicted RBP11.32□□□□□ -0.6
PRPF38A-201ENST00000257181 Q8TCH9 128 aa11.32□□□□□ -0.6
PRPF38A-201ENST00000257181 TMED6Q8WW62 240 aa11.32□□□□□ -0.6
PRPF38A-201ENST00000257181 GALNT14Q96FL9 552 aa11.32□□□□□ -0.6
PRPF38A-201ENST00000257181 FBLN5Q9UBX5 448 aa11.32□□□□□ -0.6
PRPF38A-201ENST00000257181 TSC2P49815 1807 aa11.32□□□□□ -0.6
PRPF38A-201ENST00000257181 LEPP41159 167 aa11.32□□□□□ -0.6
PRPF38A-201ENST00000257181 CACNG8Q8WXS5 425 aa11.32□□□□□ -0.6
PRPF38A-201ENST00000257181 FOXA2Q9Y261 457 aaPredicted RBP11.32□□□□□ -0.6
PRPF38A-201ENST00000257181 SLC31A2O15432 143 aa11.32□□□□□ -0.6
PRPF38A-201ENST00000257181 B2MP61769 119 aa11.32□□□□□ -0.6
PRPF38A-201ENST00000257181 FOXL2NBQ6ZUU3 175 aa11.32□□□□□ -0.6
PRPF38A-201ENST00000257181 BAGE3Q86Y29 109 aa11.32□□□□□ -0.6
PRPF38A-201ENST00000257181 BAGE2Q86Y30 109 aa11.32□□□□□ -0.6
PRPF38A-201ENST00000257181 DMRTC2Q8IXT2 367 aaPredicted RBP11.32□□□□□ -0.6
PRPF38A-201ENST00000257181 SRRM5B3KS81 715 aa11.32□□□□□ -0.6
PRPF38A-201ENST00000257181 B3GALT5-AS1P59052 145 aa11.32□□□□□ -0.6
PRPF38A-201ENST00000257181 ZP1P60852 638 aa11.32□□□□□ -0.6
PRPF38A-201ENST00000257181 OVCH2Q7RTZ1 564 aa11.32□□□□□ -0.6
PRPF38A-201ENST00000257181 MRGPRFQ96AM1 343 aa11.32□□□□□ -0.6
PRPF38A-201ENST00000257181 A0A0A6YYJ9 748 aa11.31□□□□□ -0.6
PRPF38A-201ENST00000257181 TMEM14DPA8MWL7 114 aa11.31□□□□□ -0.6
PRPF38A-201ENST00000257181 PITX3O75364 302 aa11.31□□□□□ -0.6
PRPF38A-201ENST00000257181 NHLRC3Q5JS37 347 aa11.31□□□□□ -0.6
PRPF38A-201ENST00000257181 PQLC2Q6ZP29 291 aa11.31□□□□□ -0.6
PRPF38A-201ENST00000257181 AREGP15514 252 aa11.31□□□□□ -0.6
PRPF38A-201ENST00000257181 GLIPR1P48060 266 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms