RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 SPINK9Q5DT21 86 aa16.26■□□□□ 0.19
CDC42EP1-201ENST00000249014 FAM90A2PQ658T7 463 aa16.26■□□□□ 0.19
CDC42EP1-201ENST00000249014 FAM180AQ6UWF9 173 aa16.26■□□□□ 0.19
CDC42EP1-201ENST00000249014 H2BFWTQ7Z2G1 175 aa16.26■□□□□ 0.19
CDC42EP1-201ENST00000249014 DTD1Q8TEA8 209 aa16.26■□□□□ 0.19
CDC42EP1-201ENST00000249014 MALSU1Q96EH3 234 aa16.26■□□□□ 0.19
CDC42EP1-201ENST00000249014 TVP23CQ96ET8 276 aa16.26■□□□□ 0.19
CDC42EP1-201ENST00000249014 HSD17B10Q99714 261 aaKnown RBP16.26■□□□□ 0.19
CDC42EP1-201ENST00000249014 NIPSNAP3BQ9BS92 247 aa16.26■□□□□ 0.19
CDC42EP1-201ENST00000249014 MGAQ8IWI9 3026 aa16.25■□□□□ 0.19
CDC42EP1-201ENST00000249014 ADH4P08319 380 aa16.25■□□□□ 0.19
CDC42EP1-201ENST00000249014 RPS16P62249 146 aaKnown RBP16.25■□□□□ 0.19
CDC42EP1-201ENST00000249014 NCR3LG1Q68D85 454 aa16.25■□□□□ 0.19
CDC42EP1-201ENST00000249014 IGFL3Q6UXB1 125 aa16.25■□□□□ 0.19
CDC42EP1-201ENST00000249014 TCTEX1D1Q8N7M0 179 aa16.25■□□□□ 0.19
CDC42EP1-201ENST00000249014 OR10G4Q8NGN3 311 aa16.25■□□□□ 0.19
CDC42EP1-201ENST00000249014 OR2V2Q96R30 315 aa16.25■□□□□ 0.19
CDC42EP1-201ENST00000249014 C12orf57Q99622 126 aa16.25■□□□□ 0.19
CDC42EP1-201ENST00000249014 HCFC1P51610 2035 aa16.24■□□□□ 0.19
CDC42EP1-201ENST00000249014 RAB11AP62491 216 aa16.24■□□□□ 0.19
CDC42EP1-201ENST00000249014 TRAT1Q6PIZ9 186 aa16.24■□□□□ 0.19
CDC42EP1-201ENST00000249014 HEPN1Q6WQI6 88 aa16.24■□□□□ 0.19
CDC42EP1-201ENST00000249014 RPP25LQ8N5L8 163 aaKnown RBP16.24■□□□□ 0.19
CDC42EP1-201ENST00000249014 ZNF292O60281 2723 aa16.24■□□□□ 0.19
CDC42EP1-201ENST00000249014 A0A087WWC5 75 aa16.24■□□□□ 0.19
CDC42EP1-201ENST00000249014 MARCH11A6NNE9 402 aa16.24■□□□□ 0.19
CDC42EP1-201ENST00000249014 IGHV3-13P01766 116 aa16.24■□□□□ 0.19
CDC42EP1-201ENST00000249014 TIMM23BQ5SRD1 257 aa16.24■□□□□ 0.19
CDC42EP1-201ENST00000249014 ACSM6Q6P461 480 aa16.24■□□□□ 0.19
CDC42EP1-201ENST00000249014 IQCF2Q8IXL9 164 aa16.24■□□□□ 0.19
CDC42EP1-201ENST00000249014 ZNRF1Q8ND25 227 aa16.24■□□□□ 0.19
CDC42EP1-201ENST00000249014 PINX1Q96BK5 328 aaKnown RBP16.24■□□□□ 0.19
CDC42EP1-201ENST00000249014 WASF3Q9UPY6 502 aa16.24■□□□□ 0.19
CDC42EP1-201ENST00000249014 MAP1LC3B2A6NCE7 125 aa16.23■□□□□ 0.19
CDC42EP1-201ENST00000249014 S100A6P06703 90 aa16.23■□□□□ 0.19
CDC42EP1-201ENST00000249014 MORN2Q502X0 79 aa16.23■□□□□ 0.19
CDC42EP1-201ENST00000249014 ZNF343Q6P1L6 599 aa16.23■□□□□ 0.19
CDC42EP1-201ENST00000249014 VHLLQ6RSH7 139 aa16.23■□□□□ 0.19
CDC42EP1-201ENST00000249014 SLC35E3Q7Z769 313 aa16.23■□□□□ 0.19
CDC42EP1-201ENST00000249014 CENPVQ7Z7K6 275 aaPredicted RBP16.23■□□□□ 0.19
CDC42EP1-201ENST00000249014 MOGAT3Q86VF5 341 aa16.23■□□□□ 0.19
CDC42EP1-201ENST00000249014 CA5BP1Q8WTZ4 195 aa16.23■□□□□ 0.19
CDC42EP1-201ENST00000249014 MAP1LC3BQ9GZQ8 125 aa16.23■□□□□ 0.19
CDC42EP1-201ENST00000249014 TIMM9Q9Y5J7 89 aa16.23■□□□□ 0.19
CDC42EP1-201ENST00000249014 K7EM74 188 aa16.23■□□□□ 0.19
CDC42EP1-201ENST00000249014 RBMXL2O75526 392 aaKnown RBP16.23■□□□□ 0.19
CDC42EP1-201ENST00000249014 DUTP33316 252 aaKnown RBP16.23■□□□□ 0.19
CDC42EP1-201ENST00000249014 CFHR2P36980 270 aa16.23■□□□□ 0.19
CDC42EP1-201ENST00000249014 FAM90A1Q86YD7 464 aa16.23■□□□□ 0.19
CDC42EP1-201ENST00000249014 MEGF10Q96KG7 1140 aa16.23■□□□□ 0.19
CDC42EP1-201ENST00000249014 MRPL37Q9BZE1 423 aaKnown RBP16.23■□□□□ 0.19
CDC42EP1-201ENST00000249014 LAMP3Q9UQV4 416 aa16.23■□□□□ 0.19
CDC42EP1-201ENST00000249014 DSCAMO60469 2012 aa16.23■□□□□ 0.19
CDC42EP1-201ENST00000249014 AKAP13Q12802 2813 aa16.22■□□□□ 0.19
CDC42EP1-201ENST00000249014 UBE2CO00762 179 aa16.22■□□□□ 0.19
CDC42EP1-201ENST00000249014 IGHV3-7P01780 117 aa16.22■□□□□ 0.19
CDC42EP1-201ENST00000249014 GZMHP20718 246 aa16.22■□□□□ 0.19
CDC42EP1-201ENST00000249014 GPR12P47775 334 aa16.22■□□□□ 0.19
CDC42EP1-201ENST00000249014 NKX6-1P78426 367 aaPredicted RBP16.22■□□□□ 0.19
CDC42EP1-201ENST00000249014 Q6ZS92 163 aa16.22■□□□□ 0.19
CDC42EP1-201ENST00000249014 SNX22Q96L94 193 aa16.22■□□□□ 0.19
CDC42EP1-201ENST00000249014 TMEM147Q9BVK8 224 aa16.22■□□□□ 0.19
CDC42EP1-201ENST00000249014 GNG12Q9UBI6 72 aa16.22■□□□□ 0.19
CDC42EP1-201ENST00000249014 MGST3O14880 152 aa16.21■□□□□ 0.19
CDC42EP1-201ENST00000249014 SPRY3O43610 288 aa16.21■□□□□ 0.19
CDC42EP1-201ENST00000249014 CRYAAP02489 173 aa16.21■□□□□ 0.19
CDC42EP1-201ENST00000249014 OR9G9P0C7N8 305 aa16.21■□□□□ 0.19
CDC42EP1-201ENST00000249014 ZNF134P52741 427 aa16.21■□□□□ 0.19
CDC42EP1-201ENST00000249014 KLF3P57682 345 aaPredicted RBP16.21■□□□□ 0.19
CDC42EP1-201ENST00000249014 ELOBQ15370 118 aa16.21■□□□□ 0.19
CDC42EP1-201ENST00000249014 CR1LQ2VPA4 569 aa16.21■□□□□ 0.19
CDC42EP1-201ENST00000249014 OR10P1Q8NGE3 313 aa16.21■□□□□ 0.19
CDC42EP1-201ENST00000249014 EDARADDQ8WWZ3 215 aa16.21■□□□□ 0.19
CDC42EP1-201ENST00000249014 R3HDM4Q96D70 268 aa16.21■□□□□ 0.19
CDC42EP1-201ENST00000249014 QTRT1Q9BXR0 403 aaKnown RBP16.21■□□□□ 0.19
CDC42EP1-201ENST00000249014 TM4SF5O14894 197 aa16.21■□□□□ 0.19
CDC42EP1-201ENST00000249014 GLRXP35754 106 aa16.21■□□□□ 0.19
CDC42EP1-201ENST00000249014 EIF2S3P41091 472 aaKnown RBP16.21■□□□□ 0.19
CDC42EP1-201ENST00000249014 MEOX2P50222 304 aa16.21■□□□□ 0.19
CDC42EP1-201ENST00000249014 LOXL3P58215 753 aa16.21■□□□□ 0.19
CDC42EP1-201ENST00000249014 TFF3Q07654 80 aa16.21■□□□□ 0.19
CDC42EP1-201ENST00000249014 ATP6V1FQ16864 119 aa16.21■□□□□ 0.19
CDC42EP1-201ENST00000249014 FAM201AQ5SY85 155 aa16.21■□□□□ 0.19
CDC42EP1-201ENST00000249014 UTF1Q5T230 341 aa16.21■□□□□ 0.19
CDC42EP1-201ENST00000249014 Q8WTZ3 238 aa16.21■□□□□ 0.19
CDC42EP1-201ENST00000249014 JPT1Q9UK76 154 aa16.21■□□□□ 0.19
CDC42EP1-201ENST00000249014 CEBPZOSA8MTT3 80 aa16.2■□□□□ 0.18
CDC42EP1-201ENST00000249014 HMGB3O15347 200 aaKnown RBP16.2■□□□□ 0.18
CDC42EP1-201ENST00000249014 FCGR3BO75015 233 aa16.2■□□□□ 0.18
CDC42EP1-201ENST00000249014 LHBP01229 141 aa16.2■□□□□ 0.18
CDC42EP1-201ENST00000249014 IGHV2-5P01817 119 aa16.2■□□□□ 0.18
CDC42EP1-201ENST00000249014 FGF7P21781 194 aa16.2■□□□□ 0.18
CDC42EP1-201ENST00000249014 ERVFRD-1P60508 538 aa16.2■□□□□ 0.18
CDC42EP1-201ENST00000249014 C1orf185Q5T7R7 199 aa16.2■□□□□ 0.18
CDC42EP1-201ENST00000249014 C22orf34Q6ZV56 151 aa16.2■□□□□ 0.18
CDC42EP1-201ENST00000249014 MRGPRGQ86SM5 289 aa16.2■□□□□ 0.18
CDC42EP1-201ENST00000249014 Q8TCH9 128 aa16.2■□□□□ 0.18
CDC42EP1-201ENST00000249014 ITLN1Q8WWA0 313 aa16.2■□□□□ 0.18
CDC42EP1-201ENST00000249014 CIB3Q96Q77 187 aaPredicted RBP16.2■□□□□ 0.18
CDC42EP1-201ENST00000249014 SLC39A9Q9NUM3 307 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms