RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 TRRAPQ9Y4A5 3859 aa19.18■□□□□ 0.66
SDF2L1-201ENST00000248958 EIF4EP06730 217 aaKnown RBP19.17■□□□□ 0.66
SDF2L1-201ENST00000248958 VDAC1P21796 283 aa19.17■□□□□ 0.66
SDF2L1-201ENST00000248958 RPL5P46777 297 aaKnown RBP19.17■□□□□ 0.66
SDF2L1-201ENST00000248958 RPS16P62249 146 aaKnown RBP19.17■□□□□ 0.66
SDF2L1-201ENST00000248958 PLGLAQ15195 96 aa19.17■□□□□ 0.66
SDF2L1-201ENST00000248958 OR51J1Q9H342 316 aa19.17■□□□□ 0.66
SDF2L1-201ENST00000248958 IGHV7-81A0A0B4J1V7 117 aa19.16■□□□□ 0.66
SDF2L1-201ENST00000248958 TUSC2O75896 110 aa19.16■□□□□ 0.66
SDF2L1-201ENST00000248958 PTHLHP12272 177 aa19.16■□□□□ 0.66
SDF2L1-201ENST00000248958 DUTP33316 252 aaKnown RBP19.16■□□□□ 0.66
SDF2L1-201ENST00000248958 PRSS3P35030 304 aa19.16■□□□□ 0.66
SDF2L1-201ENST00000248958 LGALS7P47929 136 aa19.16■□□□□ 0.66
SDF2L1-201ENST00000248958 RTL8BQ17RB0 113 aa19.16■□□□□ 0.66
SDF2L1-201ENST00000248958 KHDC1LQ5JSQ8 128 aa19.16■□□□□ 0.66
SDF2L1-201ENST00000248958 ZNF660Q6AZW8 331 aaPredicted RBP19.16■□□□□ 0.66
SDF2L1-201ENST00000248958 OR5AP2Q8NGF4 316 aa19.16■□□□□ 0.66
SDF2L1-201ENST00000248958 RAB2BQ8WUD1 216 aa19.16■□□□□ 0.66
SDF2L1-201ENST00000248958 IGKV1-16P04430 117 aa19.15■□□□□ 0.66
SDF2L1-201ENST00000248958 ELANEP08246 267 aa19.15■□□□□ 0.66
SDF2L1-201ENST00000248958 SLC6A1P30531 599 aa19.15■□□□□ 0.66
SDF2L1-201ENST00000248958 TMBIM6P55061 237 aa19.15■□□□□ 0.66
SDF2L1-201ENST00000248958 LINC00205P59089 165 aa19.15■□□□□ 0.66
SDF2L1-201ENST00000248958 CLVS1Q8IUQ0 354 aaPredicted RBP19.15■□□□□ 0.66
SDF2L1-201ENST00000248958 C5orf30Q96GV9 206 aa19.15■□□□□ 0.66
SDF2L1-201ENST00000248958 FBXL15Q9H469 300 aa19.15■□□□□ 0.66
SDF2L1-201ENST00000248958 WNK1Q9H4A3 2382 aa19.15■□□□□ 0.66
SDF2L1-201ENST00000248958 A0A1W2PRX2 142 aa19.14■□□□□ 0.65
SDF2L1-201ENST00000248958 HPGDSO60760 199 aa19.14■□□□□ 0.65
SDF2L1-201ENST00000248958 PF4V1P10720 104 aa19.14■□□□□ 0.65
SDF2L1-201ENST00000248958 PSG5Q15238 335 aa19.14■□□□□ 0.65
SDF2L1-201ENST00000248958 TMEM177Q53S58 311 aa19.14■□□□□ 0.65
SDF2L1-201ENST00000248958 SNAPC3Q92966 411 aa19.14■□□□□ 0.65
SDF2L1-201ENST00000248958 METTL1Q9UBP6 276 aaKnown RBP19.14■□□□□ 0.65
SDF2L1-201ENST00000248958 ANAPC10Q9UM13 185 aa19.14■□□□□ 0.65
SDF2L1-201ENST00000248958 RBMX2Q9Y388 322 aaKnown RBP19.14■□□□□ 0.65
SDF2L1-201ENST00000248958 J3QRK9 145 aa19.13■□□□□ 0.65
SDF2L1-201ENST00000248958 ELK1P19419 428 aa19.13■□□□□ 0.65
SDF2L1-201ENST00000248958 RPL23AP62750 156 aaKnown RBP19.13■□□□□ 0.65
SDF2L1-201ENST00000248958 CFHR3Q02985 330 aa19.13■□□□□ 0.65
SDF2L1-201ENST00000248958 FOXE3Q13461 319 aa19.13■□□□□ 0.65
SDF2L1-201ENST00000248958 CDK10Q15131 360 aa19.13■□□□□ 0.65
SDF2L1-201ENST00000248958 MSMO1Q15800 293 aa19.13■□□□□ 0.65
SDF2L1-201ENST00000248958 CXorf66Q5JRM2 361 aaPredicted RBP19.13■□□□□ 0.65
SDF2L1-201ENST00000248958 BVESQ8NE79 360 aa19.13■□□□□ 0.65
SDF2L1-201ENST00000248958 DDB2Q92466 427 aa19.13■□□□□ 0.65
SDF2L1-201ENST00000248958 SCPEP1Q9HB40 452 aa19.13■□□□□ 0.65
SDF2L1-201ENST00000248958 MEIS3P1A6NDR6 274 aa19.12■□□□□ 0.65
SDF2L1-201ENST00000248958 FAM25AB3EWG3 89 aa19.12■□□□□ 0.65
SDF2L1-201ENST00000248958 FAM25CB3EWG5 89 aa19.12■□□□□ 0.65
SDF2L1-201ENST00000248958 FAM25GB3EWG6 89 aa19.12■□□□□ 0.65
SDF2L1-201ENST00000248958 ATP6V0E1O15342 81 aa19.12■□□□□ 0.65
SDF2L1-201ENST00000248958 NOL3O60936 208 aaKnown RBP19.12■□□□□ 0.65
SDF2L1-201ENST00000248958 IGHG4P01861 327 aa19.12■□□□□ 0.65
SDF2L1-201ENST00000248958 NAT1P18440 290 aa19.12■□□□□ 0.65
SDF2L1-201ENST00000248958 FCGR2CP31995 323 aa19.12■□□□□ 0.65
SDF2L1-201ENST00000248958 RNF152Q8N8N0 203 aa19.12■□□□□ 0.65
SDF2L1-201ENST00000248958 GIMAP1Q8WWP7 306 aa19.12■□□□□ 0.65
SDF2L1-201ENST00000248958 HARBI1Q96MB7 349 aa19.12■□□□□ 0.65
SDF2L1-201ENST00000248958 HSD17B10Q99714 261 aaKnown RBP19.12■□□□□ 0.65
SDF2L1-201ENST00000248958 PARP11Q9NR21 331 aa19.12■□□□□ 0.65
SDF2L1-201ENST00000248958 MRPS7Q9Y2R9 242 aaKnown RBP19.12■□□□□ 0.65
SDF2L1-201ENST00000248958 PRELID3BQ9Y3B1 194 aa19.12■□□□□ 0.65
SDF2L1-201ENST00000248958 IGKV1D-13A0A0B4J2D9 117 aa19.11■□□□□ 0.65
SDF2L1-201ENST00000248958 SULT1C2O00338 296 aa19.11■□□□□ 0.65
SDF2L1-201ENST00000248958 SHOXO15266 292 aa19.11■□□□□ 0.65
SDF2L1-201ENST00000248958 TPPPO94811 219 aa19.11■□□□□ 0.65
SDF2L1-201ENST00000248958 PPYP01298 95 aa19.11■□□□□ 0.65
SDF2L1-201ENST00000248958 IGKV1-13P0DP09 117 aa19.11■□□□□ 0.65
SDF2L1-201ENST00000248958 CRIP2P52943 208 aaPredicted RBP19.11■□□□□ 0.65
SDF2L1-201ENST00000248958 TAS2R46P59540 309 aa19.11■□□□□ 0.65
SDF2L1-201ENST00000248958 CX3CL1P78423 397 aa19.11■□□□□ 0.65
SDF2L1-201ENST00000248958 ZNF562Q6V9R5 426 aa19.11■□□□□ 0.65
SDF2L1-201ENST00000248958 TCTEX1D1Q8N7M0 179 aa19.11■□□□□ 0.65
SDF2L1-201ENST00000248958 ZBTB34Q8NCN2 500 aa19.11■□□□□ 0.65
SDF2L1-201ENST00000248958 ADAM30Q9UKF2 790 aa19.11■□□□□ 0.65
SDF2L1-201ENST00000248958 MGAM2Q2M2H8 2515 aa19.11■□□□□ 0.65
SDF2L1-201ENST00000248958 TRAV41A0A0B4J266 112 aa19.1■□□□□ 0.65
SDF2L1-201ENST00000248958 LINC00473A8K010 186 aa19.1■□□□□ 0.65
SDF2L1-201ENST00000248958 AADACP22760 399 aa19.1■□□□□ 0.65
SDF2L1-201ENST00000248958 TMEM267Q0VDI3 215 aaPredicted RBP19.1■□□□□ 0.65
SDF2L1-201ENST00000248958 ZNF66Q6ZN08 573 aa19.1■□□□□ 0.65
SDF2L1-201ENST00000248958 KCTD9Q7L273 389 aa19.1■□□□□ 0.65
SDF2L1-201ENST00000248958 OSR1Q8TAX0 266 aaPredicted RBP19.1■□□□□ 0.65
SDF2L1-201ENST00000248958 GPX8Q8TED1 209 aa19.1■□□□□ 0.65
SDF2L1-201ENST00000248958 BORCS5Q969J3 196 aa19.1■□□□□ 0.65
SDF2L1-201ENST00000248958 SCOCQ9UIL1 159 aa19.1■□□□□ 0.65
SDF2L1-201ENST00000248958 PKD1L1Q8TDX9 2849 aa19.09■□□□□ 0.65
SDF2L1-201ENST00000248958 SLC25A17O43808 307 aa19.09■□□□□ 0.65
SDF2L1-201ENST00000248958 IGLV2-14P01704 120 aa19.09■□□□□ 0.65
SDF2L1-201ENST00000248958 PF4P02776 101 aa19.09■□□□□ 0.65
SDF2L1-201ENST00000248958 FCER2P06734 321 aa19.09■□□□□ 0.65
SDF2L1-201ENST00000248958 PPIFP30405 207 aaKnown RBP19.09■□□□□ 0.65
SDF2L1-201ENST00000248958 SPCS2Q15005 226 aa19.09■□□□□ 0.65
SDF2L1-201ENST00000248958 OVCH2Q7RTZ1 564 aa19.09■□□□□ 0.65
SDF2L1-201ENST00000248958 PPP1R27Q86WC6 154 aa19.09■□□□□ 0.65
SDF2L1-201ENST00000248958 C15orf40Q8WUR7 153 aa19.09■□□□□ 0.65
SDF2L1-201ENST00000248958 EHFQ9NZC4 300 aa19.09■□□□□ 0.65
SDF2L1-201ENST00000248958 FCN1O00602 326 aa19.08■□□□□ 0.64
SDF2L1-201ENST00000248958 CA2P00918 260 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms