RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 ZNF83P51522 516 aa18.29■□□□□ 0.52
RNF39-201ENST00000244360 NDUFA6P56556 154 aa18.29■□□□□ 0.52
RNF39-201ENST00000244360 ARL16Q0P5N6 197 aa18.29■□□□□ 0.52
RNF39-201ENST00000244360 CATR1Q13166 79 aa18.29■□□□□ 0.52
RNF39-201ENST00000244360 HAPLN4Q86UW8 402 aa18.29■□□□□ 0.52
RNF39-201ENST00000244360 TCTEX1D1Q8N7M0 179 aa18.29■□□□□ 0.52
RNF39-201ENST00000244360 RBMXL3Q8N7X1 1067 aaKnown RBP18.29■□□□□ 0.52
RNF39-201ENST00000244360 TGIF2-C20orf24A0A0A6YYL0 155 aa18.28■□□□□ 0.52
RNF39-201ENST00000244360 C15orf65H3BRN8 121 aa18.28■□□□□ 0.52
RNF39-201ENST00000244360 CLDN34H7C241 214 aa18.28■□□□□ 0.52
RNF39-201ENST00000244360 CYB5BO43169 146 aa18.28■□□□□ 0.52
RNF39-201ENST00000244360 RAMP3O60896 148 aa18.28■□□□□ 0.52
RNF39-201ENST00000244360 SSTR5P35346 364 aa18.28■□□□□ 0.52
RNF39-201ENST00000244360 ZNF726P1Q15940 193 aa18.28■□□□□ 0.52
RNF39-201ENST00000244360 LCN15Q6UWW0 184 aa18.28■□□□□ 0.52
RNF39-201ENST00000244360 LRP11Q86VZ4 500 aa18.28■□□□□ 0.52
RNF39-201ENST00000244360 RPRMLQ8N4K4 120 aa18.28■□□□□ 0.52
RNF39-201ENST00000244360 CA5BP1Q8WTZ4 195 aa18.28■□□□□ 0.52
RNF39-201ENST00000244360 URGCP-MRPS24S4R325 110 aa18.28■□□□□ 0.52
RNF39-201ENST00000244360 CFAP47Q6ZTR5 3102 aa18.28■□□□□ 0.52
RNF39-201ENST00000244360 ELOA3CA0A087WX78 387 aaPredicted RBP18.27■□□□□ 0.52
RNF39-201ENST00000244360 SEC14L6B5MCN3 397 aa18.27■□□□□ 0.52
RNF39-201ENST00000244360 BRWD1-AS2P59051 145 aa18.27■□□□□ 0.52
RNF39-201ENST00000244360 NKX6-1P78426 367 aaPredicted RBP18.27■□□□□ 0.52
RNF39-201ENST00000244360 HTD2P86397 168 aa18.27■□□□□ 0.52
RNF39-201ENST00000244360 GGACTQ9BVM4 153 aa18.27■□□□□ 0.52
RNF39-201ENST00000244360 CTDSP1Q9GZU7 261 aa18.27■□□□□ 0.52
RNF39-201ENST00000244360 GAR1Q9NY12 217 aaKnown RBP18.27■□□□□ 0.52
RNF39-201ENST00000244360 HSPB7Q9UBY9 170 aa18.27■□□□□ 0.52
RNF39-201ENST00000244360 IGHV2-70P01814 119 aa18.27■□□□□ 0.52
RNF39-201ENST00000244360 CRYABP02511 175 aaKnown RBP18.27■□□□□ 0.52
RNF39-201ENST00000244360 ZNF808Q8N4W9 903 aaPredicted RBP18.27■□□□□ 0.52
RNF39-201ENST00000244360 TPRX1Q8N7U7 411 aa18.27■□□□□ 0.52
RNF39-201ENST00000244360 VSIRQ9H7M9 311 aa18.27■□□□□ 0.52
RNF39-201ENST00000244360 SDF2L1Q9HCN8 221 aa18.27■□□□□ 0.52
RNF39-201ENST00000244360 ASPMQ8IZT6 3477 aa18.27■□□□□ 0.51
RNF39-201ENST00000244360 IGKV1D-17A0A075B6S4 117 aa18.26■□□□□ 0.51
RNF39-201ENST00000244360 MAP1LC3B2A6NCE7 125 aa18.26■□□□□ 0.51
RNF39-201ENST00000244360 YIF1AO95070 293 aa18.26■□□□□ 0.51
RNF39-201ENST00000244360 GLRXP35754 106 aa18.26■□□□□ 0.51
RNF39-201ENST00000244360 TNFRSF9Q07011 255 aa18.26■□□□□ 0.51
RNF39-201ENST00000244360 SLC38A11Q08AI6 406 aa18.26■□□□□ 0.51
RNF39-201ENST00000244360 SPANXN5Q5MJ07 72 aa18.26■□□□□ 0.51
RNF39-201ENST00000244360 TMEM14EPQ6UXP3 125 aa18.26■□□□□ 0.51
RNF39-201ENST00000244360 TAF15Q92804 592 aaKnown RBP eCLIP18.26■□□□□ 0.51
RNF39-201ENST00000244360 MAP1LC3BQ9GZQ8 125 aa18.26■□□□□ 0.51
RNF39-201ENST00000244360 M0R1B8 84 aa18.26■□□□□ 0.51
RNF39-201ENST00000244360 ATP6V1FQ16864 119 aa18.26■□□□□ 0.51
RNF39-201ENST00000244360 ZNF66Q6ZN08 573 aa18.26■□□□□ 0.51
RNF39-201ENST00000244360 CENPVQ7Z7K6 275 aaPredicted RBP18.26■□□□□ 0.51
RNF39-201ENST00000244360 FAM210BQ96KR6 192 aa18.26■□□□□ 0.51
RNF39-201ENST00000244360 OR4C12Q96R67 309 aa18.26■□□□□ 0.51
RNF39-201ENST00000244360 SFXN3Q9BWM7 321 aa18.26■□□□□ 0.51
RNF39-201ENST00000244360 CHD3Q12873 2000 aaKnown RBP18.26■□□□□ 0.51
RNF39-201ENST00000244360 SPINT2O43291 252 aa18.25■□□□□ 0.51
RNF39-201ENST00000244360 HIST1H2BKO60814 126 aa18.25■□□□□ 0.51
RNF39-201ENST00000244360 NDUFS6O75380 124 aaKnown RBP18.25■□□□□ 0.51
RNF39-201ENST00000244360 HIST1H2BJP06899 126 aa18.25■□□□□ 0.51
RNF39-201ENST00000244360 ADH4P08319 380 aa18.25■□□□□ 0.51
RNF39-201ENST00000244360 HIST1H2BOP23527 126 aa18.25■□□□□ 0.51
RNF39-201ENST00000244360 HIST1H2BBP33778 126 aa18.25■□□□□ 0.51
RNF39-201ENST00000244360 HIST1H2BDP58876 126 aa18.25■□□□□ 0.51
RNF39-201ENST00000244360 HIST1H2BCP62807 126 aa18.25■□□□□ 0.51
RNF39-201ENST00000244360 HIST2H2BEQ16778 126 aa18.25■□□□□ 0.51
RNF39-201ENST00000244360 HIST2H2BFQ5QNW6 126 aaPredicted RBP18.25■□□□□ 0.51
RNF39-201ENST00000244360 LURAP1LQ8IV03 231 aa18.25■□□□□ 0.51
RNF39-201ENST00000244360 HIST1H2BHQ93079 126 aa18.25■□□□□ 0.51
RNF39-201ENST00000244360 HIST1H2BNQ99877 126 aa18.25■□□□□ 0.51
RNF39-201ENST00000244360 HIST1H2BMQ99879 126 aa18.25■□□□□ 0.51
RNF39-201ENST00000244360 DUSP13Q9UII6 198 aa18.25■□□□□ 0.51
RNF39-201ENST00000244360 DMRT1Q9Y5R6 373 aa18.25■□□□□ 0.51
RNF39-201ENST00000244360 C17orf98A8MV24 154 aa18.25■□□□□ 0.51
RNF39-201ENST00000244360 K7EM74 188 aa18.25■□□□□ 0.51
RNF39-201ENST00000244360 S1PR2O95136 353 aa18.25■□□□□ 0.51
RNF39-201ENST00000244360 CRYAAP02489 173 aa18.25■□□□□ 0.51
RNF39-201ENST00000244360 CEACAM8P31997 349 aaPredicted RBP18.25■□□□□ 0.51
RNF39-201ENST00000244360 CR1LQ2VPA4 569 aa18.25■□□□□ 0.51
RNF39-201ENST00000244360 GCSAMQ8N6F7 178 aa18.25■□□□□ 0.51
RNF39-201ENST00000244360 FAM216AQ8WUB2 273 aa18.25■□□□□ 0.51
RNF39-201ENST00000244360 AGMATQ9BSE5 352 aa18.25■□□□□ 0.51
RNF39-201ENST00000244360 RBKSQ9H477 322 aa18.25■□□□□ 0.51
RNF39-201ENST00000244360 SVILO95425 2214 aa18.24■□□□□ 0.51
RNF39-201ENST00000244360 IGLV3-9A0A075B6K5 115 aa18.24■□□□□ 0.51
RNF39-201ENST00000244360 OPN1MWP04001 364 aa18.24■□□□□ 0.51
RNF39-201ENST00000244360 OPN1MW2P0DN77 364 aa18.24■□□□□ 0.51
RNF39-201ENST00000244360 OPN1MW3P0DN78 364 aa18.24■□□□□ 0.51
RNF39-201ENST00000244360 G6PCP35575 357 aa18.24■□□□□ 0.51
RNF39-201ENST00000244360 KLF3P57682 345 aaPredicted RBP18.24■□□□□ 0.51
RNF39-201ENST00000244360 MEGF10Q96KG7 1140 aa18.24■□□□□ 0.51
RNF39-201ENST00000244360 UBE2L5PA0A1B0GUS4 154 aa18.23■□□□□ 0.51
RNF39-201ENST00000244360 CLDN14O95500 239 aa18.23■□□□□ 0.51
RNF39-201ENST00000244360 CLDN1O95832 211 aa18.23■□□□□ 0.51
RNF39-201ENST00000244360 NBL1P41271 181 aa18.23■□□□□ 0.51
RNF39-201ENST00000244360 FGF8P55075 233 aaPredicted RBP18.23■□□□□ 0.51
RNF39-201ENST00000244360 ZNF816Q0VGE8 651 aaPredicted RBP18.23■□□□□ 0.51
RNF39-201ENST00000244360 SSX7Q7RTT5 188 aa18.23■□□□□ 0.51
RNF39-201ENST00000244360 SNX22Q96L94 193 aa18.23■□□□□ 0.51
RNF39-201ENST00000244360 HSD17B10Q99714 261 aaKnown RBP18.23■□□□□ 0.51
RNF39-201ENST00000244360 DCTN5Q9BTE1 182 aa18.23■□□□□ 0.51
RNF39-201ENST00000244360 HEATR1Q9H583 2144 aaKnown RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms