RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 HOXC12P31275 282 aa12.04□□□□□ -0.48
HIF3A-202ENST00000244303 PNRC1Q12796 327 aaPredicted RBP12.04□□□□□ -0.48
HIF3A-202ENST00000244303 CATR1Q13166 79 aa12.04□□□□□ -0.48
HIF3A-202ENST00000244303 GUSBP1Q15486 140 aa12.04□□□□□ -0.48
HIF3A-202ENST00000244303 WDR82Q6UXN9 313 aa12.04□□□□□ -0.48
HIF3A-202ENST00000244303 RPP25LQ8N5L8 163 aaKnown RBP12.04□□□□□ -0.48
HIF3A-202ENST00000244303 CXXC4Q9H2H0 198 aa12.04□□□□□ -0.48
HIF3A-202ENST00000244303 EP300Q09472 2414 aaPredicted RBP12.03□□□□□ -0.48
HIF3A-202ENST00000244303 ELOA3CA0A087WX78 387 aaPredicted RBP12.03□□□□□ -0.48
HIF3A-202ENST00000244303 IGHV3-43A0A0B4J1X8 118 aa12.03□□□□□ -0.48
HIF3A-202ENST00000244303 TIMM8AO60220 97 aaPredicted RBP12.03□□□□□ -0.48
HIF3A-202ENST00000244303 IGHV3-43DP0DP04 118 aa12.03□□□□□ -0.48
HIF3A-202ENST00000244303 FABP4P15090 132 aa12.03□□□□□ -0.48
HIF3A-202ENST00000244303 SSTR5P35346 364 aa12.03□□□□□ -0.48
HIF3A-202ENST00000244303 C4orf17Q53FE4 359 aa12.03□□□□□ -0.48
HIF3A-202ENST00000244303 ACSM6Q6P461 480 aa12.03□□□□□ -0.48
HIF3A-202ENST00000244303 WDR31Q8NA23 367 aa12.03□□□□□ -0.48
HIF3A-202ENST00000244303 LHX4Q969G2 390 aa12.03□□□□□ -0.48
HIF3A-202ENST00000244303 ZDHHC16Q969W1 377 aa12.03□□□□□ -0.48
HIF3A-202ENST00000244303 MSL2Q9HCI7 577 aa12.03□□□□□ -0.48
HIF3A-202ENST00000244303 SDF2L1Q9HCN8 221 aa12.03□□□□□ -0.48
HIF3A-202ENST00000244303 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.03□□□□□ -0.48
HIF3A-202ENST00000244303 SLC39A9Q9NUM3 307 aa12.03□□□□□ -0.48
HIF3A-202ENST00000244303 TIMM9Q9Y5J7 89 aa12.03□□□□□ -0.48
HIF3A-202ENST00000244303 TRAV17A0A0B4J275 112 aa12.03□□□□□ -0.48
HIF3A-202ENST00000244303 OR5H1A6NKK0 313 aa12.03□□□□□ -0.48
HIF3A-202ENST00000244303 ZG16O60844 167 aa12.03□□□□□ -0.48
HIF3A-202ENST00000244303 ZNF737O75373 536 aa12.03□□□□□ -0.48
HIF3A-202ENST00000244303 CYB5R3P00387 301 aaPredicted RBP12.03□□□□□ -0.48
HIF3A-202ENST00000244303 IFNA1P01562 189 aa12.03□□□□□ -0.48
HIF3A-202ENST00000244303 TRGC1P0CF51 173 aa12.03□□□□□ -0.48
HIF3A-202ENST00000244303 KIR2DL2P43627 348 aaPredicted RBP12.03□□□□□ -0.48
HIF3A-202ENST00000244303 COL10A1Q03692 680 aa12.03□□□□□ -0.48
HIF3A-202ENST00000244303 DEFB109BQ30KR1 87 aa12.03□□□□□ -0.48
HIF3A-202ENST00000244303 C1orf87Q8N0U7 546 aa12.03□□□□□ -0.48
HIF3A-202ENST00000244303 HIST3H2BBQ8N257 126 aa12.03□□□□□ -0.48
HIF3A-202ENST00000244303 OR13D1Q8NGV5 346 aa12.03□□□□□ -0.48
HIF3A-202ENST00000244303 FAM210BQ96KR6 192 aa12.03□□□□□ -0.48
HIF3A-202ENST00000244303 INTS1Q8N201 2190 aaKnown RBP12.02□□□□□ -0.48
HIF3A-202ENST00000244303 PMS2P5A8MQ11 134 aa12.02□□□□□ -0.49
HIF3A-202ENST00000244303 HMGB3O15347 200 aaKnown RBP12.02□□□□□ -0.49
HIF3A-202ENST00000244303 HIST1H1BP16401 226 aaKnown RBP12.02□□□□□ -0.49
HIF3A-202ENST00000244303 COX5AP20674 150 aa12.02□□□□□ -0.49
HIF3A-202ENST00000244303 FABP6P51161 128 aa12.02□□□□□ -0.49
HIF3A-202ENST00000244303 NUBP1P53384 320 aa12.02□□□□□ -0.49
HIF3A-202ENST00000244303 LINC00205P59089 165 aa12.02□□□□□ -0.49
HIF3A-202ENST00000244303 RPS16P62249 146 aaKnown RBP12.02□□□□□ -0.49
HIF3A-202ENST00000244303 C9orf106Q8NAJ2 232 aa12.02□□□□□ -0.49
HIF3A-202ENST00000244303 OR13A1Q8NGR1 328 aa12.02□□□□□ -0.49
HIF3A-202ENST00000244303 PRR7Q8TB68 274 aa12.02□□□□□ -0.49
HIF3A-202ENST00000244303 CFAP47Q6ZTR5 3102 aa12.02□□□□□ -0.49
HIF3A-202ENST00000244303 ZNF318Q5VUA4 2279 aa12.02□□□□□ -0.49
HIF3A-202ENST00000244303 HCFC1P51610 2035 aa12.02□□□□□ -0.49
HIF3A-202ENST00000244303 LINC00473A8K010 186 aa12.02□□□□□ -0.49
HIF3A-202ENST00000244303 AQP7O14520 342 aa12.02□□□□□ -0.49
HIF3A-202ENST00000244303 CECR9P0C854 216 aa12.02□□□□□ -0.49
HIF3A-202ENST00000244303 WDR25Q64LD2 544 aaPredicted RBP12.02□□□□□ -0.49
HIF3A-202ENST00000244303 IGF2-ASQ6U949 168 aa12.02□□□□□ -0.49
HIF3A-202ENST00000244303 CENPVQ7Z7K6 275 aaPredicted RBP12.02□□□□□ -0.49
HIF3A-202ENST00000244303 RFESDQ8TAC1 157 aa12.02□□□□□ -0.49
HIF3A-202ENST00000244303 DTD1Q8TEA8 209 aa12.02□□□□□ -0.49
HIF3A-202ENST00000244303 PRDM13Q9H4Q3 707 aa12.02□□□□□ -0.49
HIF3A-202ENST00000244303 SLC25A22Q9H936 323 aa12.02□□□□□ -0.49
HIF3A-202ENST00000244303 TMEM242Q9NWH2 141 aa12.02□□□□□ -0.49
HIF3A-202ENST00000244303 CACNA1GO43497 2377 aa12.01□□□□□ -0.49
HIF3A-202ENST00000244303 DEFB108AA8MXU0 73 aa12.01□□□□□ -0.49
HIF3A-202ENST00000244303 CLDN34H7C241 214 aa12.01□□□□□ -0.49
HIF3A-202ENST00000244303 CLDN14O95500 239 aa12.01□□□□□ -0.49
HIF3A-202ENST00000244303 RND2P52198 227 aa12.01□□□□□ -0.49
HIF3A-202ENST00000244303 CD81P60033 236 aa12.01□□□□□ -0.49
HIF3A-202ENST00000244303 TLE1Q04724 770 aa12.01□□□□□ -0.49
HIF3A-202ENST00000244303 GAMTQ14353 236 aa12.01□□□□□ -0.49
HIF3A-202ENST00000244303 SPINK9Q5DT21 86 aa12.01□□□□□ -0.49
HIF3A-202ENST00000244303 SSX9Q7RTT3 188 aa12.01□□□□□ -0.49
HIF3A-202ENST00000244303 FRZBQ92765 325 aa12.01□□□□□ -0.49
HIF3A-202ENST00000244303 SSX3Q99909 188 aa12.01□□□□□ -0.49
HIF3A-202ENST00000244303 TMEM147Q9BVK8 224 aa12.01□□□□□ -0.49
HIF3A-202ENST00000244303 NBEAQ8NFP9 2946 aa12.01□□□□□ -0.49
HIF3A-202ENST00000244303 TSTD3H0UI37 97 aa12□□□□□ -0.49
HIF3A-202ENST00000244303 RAB29O14966 203 aa12□□□□□ -0.49
HIF3A-202ENST00000244303 ST8SIA5O15466 376 aa12□□□□□ -0.49
HIF3A-202ENST00000244303 RBMXL2O75526 392 aaKnown RBP12□□□□□ -0.49
HIF3A-202ENST00000244303 KITLGP21583 273 aa12□□□□□ -0.49
HIF3A-202ENST00000244303 FGF7P21781 194 aa12□□□□□ -0.49
HIF3A-202ENST00000244303 TFF3Q07654 80 aa12□□□□□ -0.49
HIF3A-202ENST00000244303 FOXF2Q12947 444 aa12□□□□□ -0.49
HIF3A-202ENST00000244303 ATP6V1FQ16864 119 aa12□□□□□ -0.49
HIF3A-202ENST00000244303 Q3ZCU0 254 aa12□□□□□ -0.49
HIF3A-202ENST00000244303 H2BFWTQ7Z2G1 175 aa12□□□□□ -0.49
HIF3A-202ENST00000244303 C14orf144Q96I85 54 aa12□□□□□ -0.49
HIF3A-202ENST00000244303 MEF2BQ02080 365 aaPredicted RBP12□□□□□ -0.49
HIF3A-202ENST00000244303 PMS2P11Q13670 270 aa12□□□□□ -0.49
HIF3A-202ENST00000244303 SMIM21Q3B7S5 101 aa12□□□□□ -0.49
HIF3A-202ENST00000244303 OR10P1Q8NGE3 313 aa12□□□□□ -0.49
HIF3A-202ENST00000244303 ABHD5Q8WTS1 349 aa12□□□□□ -0.49
HIF3A-202ENST00000244303 LURAP1Q96LR2 239 aa12□□□□□ -0.49
HIF3A-202ENST00000244303 TAAR6Q96RI8 345 aa12□□□□□ -0.49
HIF3A-202ENST00000244303 DCTN5Q9BTE1 182 aa12□□□□□ -0.49
HIF3A-202ENST00000244303 PRO1933Q9H354 126 aa12□□□□□ -0.49
HIF3A-202ENST00000244303 PSG11Q9UQ72 335 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms