RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 PLCXD3Q63HM9 321 aa11□□□□□ -0.65
MSH2-201ENST00000233146 BRICD5Q6PL45 260 aa11□□□□□ -0.65
MSH2-201ENST00000233146 GP6Q9HCN6 339 aa11□□□□□ -0.65
MSH2-201ENST00000233146 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11□□□□□ -0.65
MSH2-201ENST00000233146 CCL15-CCL14A0A0B4J2E2 113 aa11□□□□□ -0.65
MSH2-201ENST00000233146 SPAARA0A1B0GVQ0 90 aa11□□□□□ -0.65
MSH2-201ENST00000233146 TMEM189A5PLL7 270 aa11□□□□□ -0.65
MSH2-201ENST00000233146 GAGE12HA6NDE8 117 aa11□□□□□ -0.65
MSH2-201ENST00000233146 OR4C46A6NHA9 309 aa11□□□□□ -0.65
MSH2-201ENST00000233146 TGFBR3LH3BV60 316 aa11□□□□□ -0.65
MSH2-201ENST00000233146 K7EN84 100 aa11□□□□□ -0.65
MSH2-201ENST00000233146 PRNPP04156 253 aa11□□□□□ -0.65
MSH2-201ENST00000233146 OR1D4P47884 311 aa11□□□□□ -0.65
MSH2-201ENST00000233146 REG1BP48304 166 aa11□□□□□ -0.65
MSH2-201ENST00000233146 SEC11AP67812 179 aa11□□□□□ -0.65
MSH2-201ENST00000233146 SLC38A11Q08AI6 406 aa11□□□□□ -0.65
MSH2-201ENST00000233146 CCL15Q16663 113 aa11□□□□□ -0.65
MSH2-201ENST00000233146 Q6ZRM9 215 aa11□□□□□ -0.65
MSH2-201ENST00000233146 ERRFI1Q9UJM3 462 aaPredicted RBP11□□□□□ -0.65
MSH2-201ENST00000233146 ZNF835Q9Y2P0 537 aa11□□□□□ -0.65
MSH2-201ENST00000233146 A0A087X0K7 114 aa10.99□□□□□ -0.65
MSH2-201ENST00000233146 E9PLN8 166 aa10.99□□□□□ -0.65
MSH2-201ENST00000233146 H0Y980 276 aa10.99□□□□□ -0.65
MSH2-201ENST00000233146 NRG2O14511 850 aaPredicted RBP10.99□□□□□ -0.65
MSH2-201ENST00000233146 TSPAN13O95857 204 aa10.99□□□□□ -0.65
MSH2-201ENST00000233146 COX5AP20674 150 aa10.99□□□□□ -0.65
MSH2-201ENST00000233146 CX3CL1P78423 397 aa10.99□□□□□ -0.65
MSH2-201ENST00000233146 OR8B8Q15620 311 aa10.99□□□□□ -0.65
MSH2-201ENST00000233146 TNXAQ16473 311 aa10.99□□□□□ -0.65
MSH2-201ENST00000233146 CT55Q8WUE5 264 aa10.99□□□□□ -0.65
MSH2-201ENST00000233146 RDH5Q92781 318 aa10.99□□□□□ -0.65
MSH2-201ENST00000233146 PIGTQ969N2 578 aa10.99□□□□□ -0.65
MSH2-201ENST00000233146 SCRT2Q9NQ03 307 aa10.99□□□□□ -0.65
MSH2-201ENST00000233146 F2RL2O00254 374 aa10.99□□□□□ -0.65
MSH2-201ENST00000233146 ZNF841Q6ZN19 808 aa10.99□□□□□ -0.65
MSH2-201ENST00000233146 OR2K2Q8NGT1 345 aa10.99□□□□□ -0.65
MSH2-201ENST00000233146 C18orf32Q8TCD1 76 aa10.99□□□□□ -0.65
MSH2-201ENST00000233146 SPACA9Q96E40 222 aaPredicted RBP10.99□□□□□ -0.65
MSH2-201ENST00000233146 FER1L6-AS2Q96M78 137 aa10.99□□□□□ -0.65
MSH2-201ENST00000233146 VN1R3Q9BXE9 311 aa10.99□□□□□ -0.65
MSH2-201ENST00000233146 PLEK2Q9NYT0 353 aa10.99□□□□□ -0.65
MSH2-201ENST00000233146 JKAMPQ9P055 326 aa10.99□□□□□ -0.65
MSH2-201ENST00000233146 KIAA1549Q9HCM3 1950 aa10.99□□□□□ -0.65
MSH2-201ENST00000233146 TMEM131Q92545 1883 aa10.99□□□□□ -0.65
MSH2-201ENST00000233146 PSMB11A5LHX3 300 aa10.99□□□□□ -0.65
MSH2-201ENST00000233146 C2orf72A6NCS6 295 aa10.99□□□□□ -0.65
MSH2-201ENST00000233146 MS4A18H0YCH9 400 aa10.99□□□□□ -0.65
MSH2-201ENST00000233146 GABRA6Q16445 453 aa10.99□□□□□ -0.65
MSH2-201ENST00000233146 MS4A18Q3C1V0 323 aa10.99□□□□□ -0.65
MSH2-201ENST00000233146 OR5A1Q8NGJ0 315 aa10.99□□□□□ -0.65
MSH2-201ENST00000233146 FAM131CQ96AQ9 280 aa10.99□□□□□ -0.65
MSH2-201ENST00000233146 C10orf35Q96D05 121 aa10.99□□□□□ -0.65
MSH2-201ENST00000233146 MRAP2Q96G30 205 aa10.99□□□□□ -0.65
MSH2-201ENST00000233146 LYZL4Q96KX0 146 aa10.99□□□□□ -0.65
MSH2-201ENST00000233146 C1RLQ9NZP8 487 aa10.99□□□□□ -0.65
MSH2-201ENST00000233146 EYSQ5T1H1 3165 aa10.98□□□□□ -0.65
MSH2-201ENST00000233146 COL4A6Q14031 1691 aa10.98□□□□□ -0.65
MSH2-201ENST00000233146 TEX48A0A1B0GUV7 120 aa10.98□□□□□ -0.65
MSH2-201ENST00000233146 H3BRM9 83 aa10.98□□□□□ -0.65
MSH2-201ENST00000233146 M0R2Z0 102 aa10.98□□□□□ -0.65
MSH2-201ENST00000233146 CRXO43186 299 aaPredicted RBP10.98□□□□□ -0.65
MSH2-201ENST00000233146 UTS2O95399 124 aa10.98□□□□□ -0.65
MSH2-201ENST00000233146 IZUMO4Q1ZYL8 232 aa10.98□□□□□ -0.65
MSH2-201ENST00000233146 TMEM249Q2WGJ8 235 aa10.98□□□□□ -0.65
MSH2-201ENST00000233146 KIR3DL3Q8N743 410 aa10.98□□□□□ -0.65
MSH2-201ENST00000233146 IRF7Q92985 503 aa10.98□□□□□ -0.65
MSH2-201ENST00000233146 GEMIN7Q9H840 131 aaKnown RBP10.98□□□□□ -0.65
MSH2-201ENST00000233146 CRIM1Q9NZV1 1036 aa10.98□□□□□ -0.65
MSH2-201ENST00000233146 V9GYV3 84 aa10.98□□□□□ -0.65
MSH2-201ENST00000233146 GON4LQ3T8J9 2241 aa10.98□□□□□ -0.65
MSH2-201ENST00000233146 ZNF816-ZNF321PA0A0X1KG74 233 aa10.98□□□□□ -0.65
MSH2-201ENST00000233146 hDV102S1A0JD36 115 aa10.98□□□□□ -0.65
MSH2-201ENST00000233146 C5orf63A6NC05 138 aa10.98□□□□□ -0.65
MSH2-201ENST00000233146 NPIPA5E9PKD4 350 aa10.98□□□□□ -0.65
MSH2-201ENST00000233146 K7EQM0 130 aa10.98□□□□□ -0.65
MSH2-201ENST00000233146 IGLV3-1P01715 115 aa10.98□□□□□ -0.65
MSH2-201ENST00000233146 CRYGCP07315 174 aa10.98□□□□□ -0.65
MSH2-201ENST00000233146 OTX2P32243 289 aa10.98□□□□□ -0.65
MSH2-201ENST00000233146 GPR183P32249 361 aa10.98□□□□□ -0.65
MSH2-201ENST00000233146 GPM6AP51674 278 aa10.98□□□□□ -0.65
MSH2-201ENST00000233146 FKBP1BP68106 108 aa10.98□□□□□ -0.65
MSH2-201ENST00000233146 PRAMEF5Q5TYX0 476 aa10.98□□□□□ -0.65
MSH2-201ENST00000233146 PRAMEF6Q5VXH4 476 aa10.98□□□□□ -0.65
MSH2-201ENST00000233146 ZNF788Q6ZQV5 615 aa10.98□□□□□ -0.65
MSH2-201ENST00000233146 FLVCR1-AS1Q8TAF5 88 aa10.98□□□□□ -0.65
MSH2-201ENST00000233146 AP1S3Q96PC3 154 aa10.98□□□□□ -0.65
MSH2-201ENST00000233146 NPIPA1Q9UND3 350 aa10.98□□□□□ -0.65
MSH2-201ENST00000233146 ARL2-SNX15V9GYD0 113 aa10.98□□□□□ -0.65
MSH2-201ENST00000233146 PRR19A6NJB7 356 aa10.97□□□□□ -0.65
MSH2-201ENST00000233146 RAB30Q15771 203 aa10.97□□□□□ -0.65
MSH2-201ENST00000233146 ZDHHC23Q8IYP9 409 aa10.97□□□□□ -0.65
MSH2-201ENST00000233146 MBD6Q96DN6 1003 aa10.97□□□□□ -0.65
MSH2-201ENST00000233146 TAAR6Q96RI8 345 aa10.97□□□□□ -0.65
MSH2-201ENST00000233146 TMEM70Q9BUB7 260 aa10.97□□□□□ -0.65
MSH2-201ENST00000233146 PHF7Q9BWX1 381 aaPredicted RBP10.97□□□□□ -0.65
MSH2-201ENST00000233146 PPP1R3CQ9UQK1 317 aa10.97□□□□□ -0.65
MSH2-201ENST00000233146 CCL26Q9Y258 94 aa10.97□□□□□ -0.65
MSH2-201ENST00000233146 H0YGG7 62 aa10.97□□□□□ -0.65
MSH2-201ENST00000233146 TNFSF14O43557 240 aa10.97□□□□□ -0.65
MSH2-201ENST00000233146 HSBP1O75506 76 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms