RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 COL6A3P12111 3177 aa12.02□□□□□ -0.49
PCDHB3-201ENST00000231130 HSBP1L1C9JCN9 74 aa12.01□□□□□ -0.49
PCDHB3-201ENST00000231130 K7EP13 123 aa12.01□□□□□ -0.49
PCDHB3-201ENST00000231130 CRYGSP22914 178 aa12.01□□□□□ -0.49
PCDHB3-201ENST00000231130 SLC25A53Q5H9E4 307 aa12.01□□□□□ -0.49
PCDHB3-201ENST00000231130 FAM58AQ8N1B3 248 aa12.01□□□□□ -0.49
PCDHB3-201ENST00000231130 TMEM54Q969K7 222 aa12.01□□□□□ -0.49
PCDHB3-201ENST00000231130 PXMP4Q9Y6I8 212 aa12.01□□□□□ -0.49
PCDHB3-201ENST00000231130 ODAMA1E959 279 aa12.01□□□□□ -0.49
PCDHB3-201ENST00000231130 TRAPPC2LH3BP13 241 aa12.01□□□□□ -0.49
PCDHB3-201ENST00000231130 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.01□□□□□ -0.49
PCDHB3-201ENST00000231130 ST6GALNAC6Q969X2 333 aa12.01□□□□□ -0.49
PCDHB3-201ENST00000231130 CSTL1Q9H114 145 aa12.01□□□□□ -0.49
PCDHB3-201ENST00000231130 TBL2Q9Y4P3 447 aaKnown RBP12.01□□□□□ -0.49
PCDHB3-201ENST00000231130 ICE1Q9Y2F5 2266 aa12.01□□□□□ -0.49
PCDHB3-201ENST00000231130 TRAV1-1A0A0B4J248 108 aa12.01□□□□□ -0.49
PCDHB3-201ENST00000231130 IGKV1D-33P01593 117 aa12.01□□□□□ -0.49
PCDHB3-201ENST00000231130 IGKV1-33P01594 117 aa12.01□□□□□ -0.49
PCDHB3-201ENST00000231130 RPP25LQ8N5L8 163 aaKnown RBP12.01□□□□□ -0.49
PCDHB3-201ENST00000231130 KLHDC1Q8N7A1 406 aa12.01□□□□□ -0.49
PCDHB3-201ENST00000231130 NEIL1Q96FI4 390 aaPredicted RBP12.01□□□□□ -0.49
PCDHB3-201ENST00000231130 MRPL18Q9H0U6 180 aaKnown RBP12.01□□□□□ -0.49
PCDHB3-201ENST00000231130 SLC45A2Q9UMX9 530 aa12.01□□□□□ -0.49
PCDHB3-201ENST00000231130 PRR14LQ5THK1 2151 aa12.01□□□□□ -0.49
PCDHB3-201ENST00000231130 C5orf49A4QMS7 147 aa12□□□□□ -0.49
PCDHB3-201ENST00000231130 GOSR1O95249 250 aa12□□□□□ -0.49
PCDHB3-201ENST00000231130 KRASP01116 189 aa12□□□□□ -0.49
PCDHB3-201ENST00000231130 CDC34P49427 236 aaPredicted RBP12□□□□□ -0.49
PCDHB3-201ENST00000231130 SLC35B1P78383 322 aa12□□□□□ -0.49
PCDHB3-201ENST00000231130 TGFBR3Q03167 851 aa12□□□□□ -0.49
PCDHB3-201ENST00000231130 FAM19A2Q8N3H0 131 aa12□□□□□ -0.49
PCDHB3-201ENST00000231130 ABHD3Q8WU67 409 aa12□□□□□ -0.49
PCDHB3-201ENST00000231130 MEGF9Q9H1U4 602 aa12□□□□□ -0.49
PCDHB3-201ENST00000231130 HIPK2Q9H2X6 1198 aa12□□□□□ -0.49
PCDHB3-201ENST00000231130 TMEM38BQ9NVV0 291 aa12□□□□□ -0.49
PCDHB3-201ENST00000231130 OR6C6A6NF89 314 aa12□□□□□ -0.49
PCDHB3-201ENST00000231130 NDUFB4O95168 129 aa12□□□□□ -0.49
PCDHB3-201ENST00000231130 IGLC2P0DOY2 106 aa12□□□□□ -0.49
PCDHB3-201ENST00000231130 IGLC3P0DOY3 106 aa12□□□□□ -0.49
PCDHB3-201ENST00000231130 PRDX4Q13162 271 aa12□□□□□ -0.49
PCDHB3-201ENST00000231130 LCN12Q6JVE5 192 aa12□□□□□ -0.49
PCDHB3-201ENST00000231130 GUSBP11Q6P575 273 aa12□□□□□ -0.49
PCDHB3-201ENST00000231130 TMEM108Q6UXF1 575 aa12□□□□□ -0.49
PCDHB3-201ENST00000231130 MKXQ8IYA7 352 aa12□□□□□ -0.49
PCDHB3-201ENST00000231130 TCTEX1D1Q8N7M0 179 aa12□□□□□ -0.49
PCDHB3-201ENST00000231130 C10orf35Q96D05 121 aa12□□□□□ -0.49
PCDHB3-201ENST00000231130 IGHV2OR16-5A0A0B4J2B6 119 aa11.99□□□□□ -0.49
PCDHB3-201ENST00000231130 hCG_38984A0A1B0GV85 526 aa11.99□□□□□ -0.49
PCDHB3-201ENST00000231130 CLEC18AA5D8T8 446 aa11.99□□□□□ -0.49
PCDHB3-201ENST00000231130 C11orf94C9JXX5 98 aa11.99□□□□□ -0.49
PCDHB3-201ENST00000231130 ZIC3O60481 467 aa11.99□□□□□ -0.49
PCDHB3-201ENST00000231130 UBE2NP61088 152 aaKnown RBP11.99□□□□□ -0.49
PCDHB3-201ENST00000231130 HAPLN4Q86UW8 402 aa11.99□□□□□ -0.49
PCDHB3-201ENST00000231130 C1orf174Q8IYL3 243 aa11.99□□□□□ -0.49
PCDHB3-201ENST00000231130 ZNF525Q8N782 197 aa11.99□□□□□ -0.49
PCDHB3-201ENST00000231130 CLEC18CQ8NCF0 446 aa11.99□□□□□ -0.49
PCDHB3-201ENST00000231130 AGBL5Q8NDL9 886 aa11.99□□□□□ -0.49
PCDHB3-201ENST00000231130 OR2H1Q9GZK4 316 aa11.99□□□□□ -0.49
PCDHB3-201ENST00000231130 MTCH1Q9NZJ7 389 aa11.99□□□□□ -0.49
PCDHB3-201ENST00000231130 PTRH2Q9Y3E5 179 aaKnown RBP11.99□□□□□ -0.49
PCDHB3-201ENST00000231130 ATG2AQ2TAZ0 1938 aa11.99□□□□□ -0.49
PCDHB3-201ENST00000231130 A0A1W2PN81 502 aa11.99□□□□□ -0.49
PCDHB3-201ENST00000231130 RNF212BA8MTL3 300 aa11.99□□□□□ -0.49
PCDHB3-201ENST00000231130 HBG1P69891 147 aa11.99□□□□□ -0.49
PCDHB3-201ENST00000231130 HBG2P69892 147 aa11.99□□□□□ -0.49
PCDHB3-201ENST00000231130 HTD2P86397 168 aa11.99□□□□□ -0.49
PCDHB3-201ENST00000231130 MRPL21Q7Z2W9 205 aaKnown RBP11.99□□□□□ -0.49
PCDHB3-201ENST00000231130 C17orf82Q86X59 251 aaPredicted RBP11.99□□□□□ -0.49
PCDHB3-201ENST00000231130 ZNF295-AS1Q8N0V1 137 aa11.99□□□□□ -0.49
PCDHB3-201ENST00000231130 CLN8Q9UBY8 286 aa11.99□□□□□ -0.49
PCDHB3-201ENST00000231130 RNF114Q9Y508 228 aa11.99□□□□□ -0.49
PCDHB3-201ENST00000231130 RP1L1Q8IWN7 2480 aaPredicted RBP11.99□□□□□ -0.49
PCDHB3-201ENST00000231130 A0A1W2PRS3 328 aa11.99□□□□□ -0.49
PCDHB3-201ENST00000231130 SNURFLB1AK76 121 aa11.99□□□□□ -0.49
PCDHB3-201ENST00000231130 K7ERU9 68 aa11.99□□□□□ -0.49
PCDHB3-201ENST00000231130 VAMP5O95183 116 aa11.99□□□□□ -0.49
PCDHB3-201ENST00000231130 GABRA2P47869 451 aa11.99□□□□□ -0.49
PCDHB3-201ENST00000231130 NXPH1P58417 271 aa11.99□□□□□ -0.49
PCDHB3-201ENST00000231130 SLC38A11Q08AI6 406 aa11.99□□□□□ -0.49
PCDHB3-201ENST00000231130 ZNF808Q8N4W9 903 aaPredicted RBP11.99□□□□□ -0.49
PCDHB3-201ENST00000231130 CLDN23Q96B33 292 aa11.99□□□□□ -0.49
PCDHB3-201ENST00000231130 BORCS7Q96B45 105 aa11.99□□□□□ -0.49
PCDHB3-201ENST00000231130 DERL1Q9BUN8 251 aa11.99□□□□□ -0.49
PCDHB3-201ENST00000231130 NRN1Q9NPD7 142 aa11.99□□□□□ -0.49
PCDHB3-201ENST00000231130 HSPB7Q9UBY9 170 aa11.99□□□□□ -0.49
PCDHB3-201ENST00000231130 SIRPB1O00241 398 aa11.98□□□□□ -0.49
PCDHB3-201ENST00000231130 LCN2P80188 198 aa11.98□□□□□ -0.49
PCDHB3-201ENST00000231130 ZNF816Q0VGE8 651 aaPredicted RBP11.98□□□□□ -0.49
PCDHB3-201ENST00000231130 DAZAP2Q15038 168 aaPredicted RBP11.98□□□□□ -0.49
PCDHB3-201ENST00000231130 WIPI1Q5MNZ9 446 aaPredicted RBP11.98□□□□□ -0.49
PCDHB3-201ENST00000231130 SPATA46Q5T0L3 261 aa11.98□□□□□ -0.49
PCDHB3-201ENST00000231130 LINC01551Q86U37 167 aa11.98□□□□□ -0.49
PCDHB3-201ENST00000231130 MBD3L1Q8WWY6 194 aa11.98□□□□□ -0.49
PCDHB3-201ENST00000231130 RAB40CQ96S21 281 aa11.98□□□□□ -0.49
PCDHB3-201ENST00000231130 WASHC3Q9Y3C0 194 aa11.98□□□□□ -0.49
PCDHB3-201ENST00000231130 A0A0G2JMM0 328 aa11.98□□□□□ -0.49
PCDHB3-201ENST00000231130 KIR2DS1A0A191URI9 304 aa11.98□□□□□ -0.49
PCDHB3-201ENST00000231130 A0A1W2PPB8 328 aa11.98□□□□□ -0.49
PCDHB3-201ENST00000231130 KIR3DP1A8MWS1 328 aa11.98□□□□□ -0.49
PCDHB3-201ENST00000231130 SLC17A3O00476 420 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms