RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 CLDN14O95500 239 aa11.73□□□□□ -0.53
NFKB1-201ENST00000226574 LINC00469Q8N7U9 141 aa11.73□□□□□ -0.53
NFKB1-201ENST00000226574 MANBALQ9NQG1 85 aa11.73□□□□□ -0.53
NFKB1-201ENST00000226574 NCOA6Q14686 2063 aaPredicted RBP11.73□□□□□ -0.53
NFKB1-201ENST00000226574 IGKV1-27A0A075B6S5 117 aa11.72□□□□□ -0.53
NFKB1-201ENST00000226574 HELTA6NFD8 242 aa11.72□□□□□ -0.53
NFKB1-201ENST00000226574 OOEPA6NGQ2 149 aa11.72□□□□□ -0.53
NFKB1-201ENST00000226574 LRRC30A6NM36 301 aa11.72□□□□□ -0.53
NFKB1-201ENST00000226574 SLC25A5P05141 298 aaKnown RBP11.72□□□□□ -0.53
NFKB1-201ENST00000226574 FCER1GP30273 86 aa11.72□□□□□ -0.53
NFKB1-201ENST00000226574 ZNF137PP52743 207 aa11.72□□□□□ -0.53
NFKB1-201ENST00000226574 COL10A1Q03692 680 aa11.72□□□□□ -0.53
NFKB1-201ENST00000226574 TNFRSF9Q07011 255 aa11.72□□□□□ -0.53
NFKB1-201ENST00000226574 LHFPL1Q86WI0 220 aa11.72□□□□□ -0.53
NFKB1-201ENST00000226574 OR8I2Q8N0Y5 310 aa11.72□□□□□ -0.53
NFKB1-201ENST00000226574 FAM89BQ8N5H3 189 aa11.72□□□□□ -0.53
NFKB1-201ENST00000226574 SLC24A4Q8NFF2 622 aa11.72□□□□□ -0.53
NFKB1-201ENST00000226574 WDR54Q9H977 334 aa11.72□□□□□ -0.53
NFKB1-201ENST00000226574 NKX6-3A6NJ46 265 aa11.72□□□□□ -0.53
NFKB1-201ENST00000226574 SRSF10O75494 262 aaKnown RBP11.72□□□□□ -0.53
NFKB1-201ENST00000226574 HRASP01112 189 aa11.72□□□□□ -0.53
NFKB1-201ENST00000226574 CBLN1P23435 193 aa11.72□□□□□ -0.53
NFKB1-201ENST00000226574 TRA2AQ13595 282 aaKnown RBP eCLIP11.72□□□□□ -0.53
NFKB1-201ENST00000226574 HLA-DRB5Q30154 266 aa11.72□□□□□ -0.53
NFKB1-201ENST00000226574 C10orf128Q5T292 105 aa11.72□□□□□ -0.53
NFKB1-201ENST00000226574 ZADH2Q8N4Q0 377 aa11.72□□□□□ -0.53
NFKB1-201ENST00000226574 OR2D3Q8NGH3 330 aa11.72□□□□□ -0.53
NFKB1-201ENST00000226574 NUDT16L1Q9BRJ7 211 aaKnown RBP11.72□□□□□ -0.53
NFKB1-201ENST00000226574 ZNF891A8MT65 544 aaPredicted RBP11.72□□□□□ -0.53
NFKB1-201ENST00000226574 RRP8O43159 456 aaKnown RBP11.72□□□□□ -0.53
NFKB1-201ENST00000226574 HOXA5P20719 270 aa11.72□□□□□ -0.53
NFKB1-201ENST00000226574 NPY1RP25929 384 aa11.72□□□□□ -0.53
NFKB1-201ENST00000226574 PTTG1IPP53801 180 aa11.72□□□□□ -0.53
NFKB1-201ENST00000226574 SUB1P53999 127 aaKnown RBP eCLIP11.72□□□□□ -0.53
NFKB1-201ENST00000226574 ZNF600Q6ZNG1 722 aa11.72□□□□□ -0.53
NFKB1-201ENST00000226574 SAP25Q8TEE9 199 aa11.72□□□□□ -0.53
NFKB1-201ENST00000226574 NOL4LQ96MY1 436 aaPredicted RBP11.72□□□□□ -0.53
NFKB1-201ENST00000226574 PXMP4Q9Y6I8 212 aa11.72□□□□□ -0.53
NFKB1-201ENST00000226574 LINC01387J3KSC0 135 aa11.71□□□□□ -0.53
NFKB1-201ENST00000226574 AGAP20933 346 aa11.71□□□□□ -0.53
NFKB1-201ENST00000226574 ERVFRD-1P60508 538 aa11.71□□□□□ -0.53
NFKB1-201ENST00000226574 HGFACQ04756 655 aa11.71□□□□□ -0.53
NFKB1-201ENST00000226574 Q56UQ5 140 aa11.71□□□□□ -0.53
NFKB1-201ENST00000226574 ETFRF1Q6IPR1 90 aa11.71□□□□□ -0.53
NFKB1-201ENST00000226574 WDFY1Q8IWB7 410 aa11.71□□□□□ -0.53
NFKB1-201ENST00000226574 FAM131CQ96AQ9 280 aa11.71□□□□□ -0.53
NFKB1-201ENST00000226574 ANAPC16Q96DE5 110 aa11.71□□□□□ -0.53
NFKB1-201ENST00000226574 C5orf52A6NGY3 159 aa11.71□□□□□ -0.53
NFKB1-201ENST00000226574 CD33P20138 364 aa11.71□□□□□ -0.53
NFKB1-201ENST00000226574 ST6GALNAC3Q8NDV1 305 aa11.71□□□□□ -0.53
NFKB1-201ENST00000226574 GATAD1Q8WUU5 269 aa11.71□□□□□ -0.53
NFKB1-201ENST00000226574 H3BTX0 84 aa11.71□□□□□ -0.54
NFKB1-201ENST00000226574 SLC17A3O00476 420 aa11.71□□□□□ -0.54
NFKB1-201ENST00000226574 CASP6P55212 293 aa11.71□□□□□ -0.54
NFKB1-201ENST00000226574 RANP62826 216 aaKnown RBP11.71□□□□□ -0.54
NFKB1-201ENST00000226574 RPEL1Q2QD12 228 aa11.71□□□□□ -0.54
NFKB1-201ENST00000226574 MOB3BQ86TA1 216 aa11.71□□□□□ -0.54
NFKB1-201ENST00000226574 OR1L4Q8NGR5 311 aa11.71□□□□□ -0.54
NFKB1-201ENST00000226574 MFAP2P55001 183 aa11.71□□□□□ -0.54
NFKB1-201ENST00000226574 CCL8P80075 99 aa11.71□□□□□ -0.54
NFKB1-201ENST00000226574 ICAM4Q14773 271 aa11.71□□□□□ -0.54
NFKB1-201ENST00000226574 HIST3H3Q16695 136 aa11.71□□□□□ -0.54
NFKB1-201ENST00000226574 MST1LQ2TV78 715 aa11.71□□□□□ -0.54
NFKB1-201ENST00000226574 SIGLEC12Q96PQ1 595 aa11.71□□□□□ -0.54
NFKB1-201ENST00000226574 WDR61Q9GZS3 305 aaKnown RBP11.71□□□□□ -0.54
NFKB1-201ENST00000226574 PRDM6Q9NQX0 595 aa11.71□□□□□ -0.54
NFKB1-201ENST00000226574 COA4Q9NYJ1 87 aa11.71□□□□□ -0.54
NFKB1-201ENST00000226574 PMS2P1A4D2B8 440 aa11.7□□□□□ -0.54
NFKB1-201ENST00000226574 PRR19A6NJB7 356 aa11.7□□□□□ -0.54
NFKB1-201ENST00000226574 UCP1P25874 307 aa11.7□□□□□ -0.54
NFKB1-201ENST00000226574 OTX1P32242 354 aaPredicted RBP11.7□□□□□ -0.54
NFKB1-201ENST00000226574 TFF3Q07654 80 aa11.7□□□□□ -0.54
NFKB1-201ENST00000226574 AARDQ4LEZ3 155 aa11.7□□□□□ -0.54
NFKB1-201ENST00000226574 C11orf42Q8N5U0 333 aa11.7□□□□□ -0.54
NFKB1-201ENST00000226574 TMEM171Q8WVE6 324 aa11.7□□□□□ -0.54
NFKB1-201ENST00000226574 SLC45A2Q9UMX9 530 aa11.7□□□□□ -0.54
NFKB1-201ENST00000226574 IGHV3-72A0A0B4J1Y9 119 aa11.7□□□□□ -0.54
NFKB1-201ENST00000226574 C1QTNF9BB2RNN3 333 aa11.7□□□□□ -0.54
NFKB1-201ENST00000226574 K7N7A8 449 aa11.7□□□□□ -0.54
NFKB1-201ENST00000226574 RBP4P02753 201 aa11.7□□□□□ -0.54
NFKB1-201ENST00000226574 ARSJQ5FYB0 599 aaPredicted RBP11.7□□□□□ -0.54
NFKB1-201ENST00000226574 PYY3Q5JQD4 70 aa11.7□□□□□ -0.54
NFKB1-201ENST00000226574 ZNF506Q5JVG8 444 aa11.7□□□□□ -0.54
NFKB1-201ENST00000226574 DDA1Q9BW61 102 aa11.7□□□□□ -0.54
NFKB1-201ENST00000226574 TRBV6-7A0A0A0MS04 114 aa11.7□□□□□ -0.54
NFKB1-201ENST00000226574 MARCH11A6NNE9 402 aa11.7□□□□□ -0.54
NFKB1-201ENST00000226574 FAM157AC9JC47 383 aa11.7□□□□□ -0.54
NFKB1-201ENST00000226574 TCF21O43680 179 aa11.7□□□□□ -0.54
NFKB1-201ENST00000226574 ARL14EPLP0DKL9 152 aa11.7□□□□□ -0.54
NFKB1-201ENST00000226574 UCP3P55916 312 aa11.7□□□□□ -0.54
NFKB1-201ENST00000226574 QRFPP83859 136 aa11.7□□□□□ -0.54
NFKB1-201ENST00000226574 SPEM2Q0P670 501 aa11.7□□□□□ -0.54
NFKB1-201ENST00000226574 GTF3C1Q12789 2109 aa11.7□□□□□ -0.54
NFKB1-201ENST00000226574 CLDND2Q8NHS1 167 aa11.7□□□□□ -0.54
NFKB1-201ENST00000226574 CXXC4Q9H2H0 198 aa11.7□□□□□ -0.54
NFKB1-201ENST00000226574 C5orf42Q9H799 3197 aa11.7□□□□□ -0.54
NFKB1-201ENST00000226574 WIPF3A6NGB9 483 aa11.69□□□□□ -0.54
NFKB1-201ENST00000226574 DNPH1O43598 174 aa11.69□□□□□ -0.54
NFKB1-201ENST00000226574 PRDX2P32119 198 aa11.69□□□□□ -0.54
NFKB1-201ENST00000226574 UCP2P55851 309 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms