RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 OR5H8P0DN80 308 aa9.99□□□□□ -0.81
LSM5-201ENST00000223084 AADACP22760 399 aa9.99□□□□□ -0.81
LSM5-201ENST00000223084 FCGR2CP31995 323 aa9.99□□□□□ -0.81
LSM5-201ENST00000223084 RPS16P62249 146 aaKnown RBP9.99□□□□□ -0.81
LSM5-201ENST00000223084 CD83Q01151 205 aa9.99□□□□□ -0.81
LSM5-201ENST00000223084 FOXRED2Q8IWF2 684 aa9.99□□□□□ -0.81
LSM5-201ENST00000223084 ZNF645Q8N7E2 425 aa9.99□□□□□ -0.81
LSM5-201ENST00000223084 BVESQ8NE79 360 aa9.99□□□□□ -0.81
LSM5-201ENST00000223084 CHPT1Q8WUD6 406 aa9.99□□□□□ -0.81
LSM5-201ENST00000223084 ISOC1Q96CN7 298 aa9.99□□□□□ -0.81
LSM5-201ENST00000223084 NECAP2Q9NVZ3 263 aa9.99□□□□□ -0.81
LSM5-201ENST00000223084 KIAA1456Q9P272 454 aa9.99□□□□□ -0.81
LSM5-201ENST00000223084 ANAPC10Q9UM13 185 aa9.99□□□□□ -0.81
LSM5-201ENST00000223084 IGHV7-81A0A0B4J1V7 117 aa9.98□□□□□ -0.81
LSM5-201ENST00000223084 LINC00473A8K010 186 aa9.98□□□□□ -0.81
LSM5-201ENST00000223084 H3BMQ9 156 aa9.98□□□□□ -0.81
LSM5-201ENST00000223084 AP4M1O00189 453 aa9.98□□□□□ -0.81
LSM5-201ENST00000223084 FCN1O00602 326 aa9.98□□□□□ -0.81
LSM5-201ENST00000223084 CTDSP2O14595 271 aa9.98□□□□□ -0.81
LSM5-201ENST00000223084 RRHO14718 337 aa9.98□□□□□ -0.81
LSM5-201ENST00000223084 KCNAB3O43448 404 aa9.98□□□□□ -0.81
LSM5-201ENST00000223084 NOL3O60936 208 aaKnown RBP9.98□□□□□ -0.81
LSM5-201ENST00000223084 RBBP9O75884 186 aa9.98□□□□□ -0.81
LSM5-201ENST00000223084 IGLV2-14P01704 120 aa9.98□□□□□ -0.81
LSM5-201ENST00000223084 PMP2P02689 132 aa9.98□□□□□ -0.81
LSM5-201ENST00000223084 DUTP33316 252 aaKnown RBP9.98□□□□□ -0.81
LSM5-201ENST00000223084 THBS3P49746 956 aa9.98□□□□□ -0.81
LSM5-201ENST00000223084 CDK10Q15131 360 aa9.98□□□□□ -0.81
LSM5-201ENST00000223084 PSG5Q15238 335 aa9.98□□□□□ -0.81
LSM5-201ENST00000223084 RNASE12Q5GAN4 147 aaKnown RBP9.98□□□□□ -0.81
LSM5-201ENST00000223084 KHDC1LQ5JSQ8 128 aa9.98□□□□□ -0.81
LSM5-201ENST00000223084 LIN54Q6MZP7 749 aa9.98□□□□□ -0.81
LSM5-201ENST00000223084 NDUFA11Q86Y39 141 aa9.98□□□□□ -0.81
LSM5-201ENST00000223084 PDPNQ86YL7 162 aa9.98□□□□□ -0.81
LSM5-201ENST00000223084 OR5AP2Q8NGF4 316 aa9.98□□□□□ -0.81
LSM5-201ENST00000223084 OR4X2Q8NGF9 303 aa9.98□□□□□ -0.81
LSM5-201ENST00000223084 DYNC2LI1Q8TCX1 351 aa9.98□□□□□ -0.81
LSM5-201ENST00000223084 GPX8Q8TED1 209 aa9.98□□□□□ -0.81
LSM5-201ENST00000223084 FLYWCH2Q96CP2 140 aaKnown RBP9.98□□□□□ -0.81
LSM5-201ENST00000223084 CLCC1Q96S66 551 aa9.98□□□□□ -0.81
LSM5-201ENST00000223084 BCL7BQ9BQE9 202 aa9.98□□□□□ -0.81
LSM5-201ENST00000223084 MIXL1Q9H2W2 232 aa9.98□□□□□ -0.81
LSM5-201ENST00000223084 EXTL2Q9UBQ6 330 aa9.98□□□□□ -0.81
LSM5-201ENST00000223084 RBMX2Q9Y388 322 aaKnown RBP9.98□□□□□ -0.81
LSM5-201ENST00000223084 CEPT1Q9Y6K0 416 aa9.98□□□□□ -0.81
LSM5-201ENST00000223084 HLA-DRB1P01911 266 aa9.97□□□□□ -0.81
LSM5-201ENST00000223084 NAT1P18440 290 aa9.97□□□□□ -0.81
LSM5-201ENST00000223084 RFX2P48378 723 aa9.97□□□□□ -0.81
LSM5-201ENST00000223084 FXYD4P59646 89 aa9.97□□□□□ -0.81
LSM5-201ENST00000223084 RPL30P62888 115 aaKnown RBP9.97□□□□□ -0.81
LSM5-201ENST00000223084 PLGLAQ15195 96 aa9.97□□□□□ -0.81
LSM5-201ENST00000223084 LCNL1Q6ZST4 164 aa9.97□□□□□ -0.81
LSM5-201ENST00000223084 LYSMD2Q8IV50 215 aa9.97□□□□□ -0.81
LSM5-201ENST00000223084 SECTM1Q8WVN6 248 aa9.97□□□□□ -0.81
LSM5-201ENST00000223084 DDB2Q92466 427 aa9.97□□□□□ -0.81
LSM5-201ENST00000223084 GPHA2Q96T91 129 aa9.97□□□□□ -0.81
LSM5-201ENST00000223084 RNF5Q99942 180 aa9.97□□□□□ -0.81
LSM5-201ENST00000223084 MMP27Q9H306 513 aa9.97□□□□□ -0.81
LSM5-201ENST00000223084 OR51J1Q9H342 316 aa9.97□□□□□ -0.81
LSM5-201ENST00000223084 PARP11Q9NR21 331 aa9.97□□□□□ -0.81
LSM5-201ENST00000223084 CCL28Q9NRJ3 127 aa9.97□□□□□ -0.81
LSM5-201ENST00000223084 TPSG1Q9NRR2 321 aa9.97□□□□□ -0.81
LSM5-201ENST00000223084 EHFQ9NZC4 300 aa9.97□□□□□ -0.81
LSM5-201ENST00000223084 METTL1Q9UBP6 276 aaKnown RBP9.97□□□□□ -0.81
LSM5-201ENST00000223084 WSB1Q9Y6I7 421 aa9.97□□□□□ -0.81
LSM5-201ENST00000223084 TNCP24821 2201 aa9.97□□□□□ -0.81
LSM5-201ENST00000223084 SRRM4A7MD48 611 aaKnown RBP9.96□□□□□ -0.82
LSM5-201ENST00000223084 G3V318 75 aa9.96□□□□□ -0.82
LSM5-201ENST00000223084 ATP6V0E1O15342 81 aa9.96□□□□□ -0.82
LSM5-201ENST00000223084 RGS5O15539 181 aa9.96□□□□□ -0.82
LSM5-201ENST00000223084 SLC25A17O43808 307 aa9.96□□□□□ -0.82
LSM5-201ENST00000223084 PPYP01298 95 aa9.96□□□□□ -0.82
LSM5-201ENST00000223084 IGLV2-23P01705 113 aa9.96□□□□□ -0.82
LSM5-201ENST00000223084 HLA-DMAP28067 261 aa9.96□□□□□ -0.82
LSM5-201ENST00000223084 SLC35B1P78383 322 aa9.96□□□□□ -0.82
LSM5-201ENST00000223084 CX3CL1P78423 397 aa9.96□□□□□ -0.82
LSM5-201ENST00000223084 NDPQ00604 133 aa9.96□□□□□ -0.82
LSM5-201ENST00000223084 OR2B11Q5JQS5 317 aa9.96□□□□□ -0.82
LSM5-201ENST00000223084 LAX1Q8IWV1 398 aa9.96□□□□□ -0.82
LSM5-201ENST00000223084 OR5H2Q8NGV7 314 aa9.96□□□□□ -0.82
LSM5-201ENST00000223084 GIMAP1Q8WWP7 306 aa9.96□□□□□ -0.82
LSM5-201ENST00000223084 R3HDM4Q96D70 268 aa9.96□□□□□ -0.82
LSM5-201ENST00000223084 ADTRPQ96IZ2 230 aa9.96□□□□□ -0.82
LSM5-201ENST00000223084 HARBI1Q96MB7 349 aa9.96□□□□□ -0.82
LSM5-201ENST00000223084 TSNAXQ99598 290 aaKnown RBP9.96□□□□□ -0.82
LSM5-201ENST00000223084 SLC5A7Q9GZV3 580 aa9.96□□□□□ -0.82
LSM5-201ENST00000223084 CCDC59Q9P031 241 aaKnown RBP9.96□□□□□ -0.82
LSM5-201ENST00000223084 FBXO7Q9Y3I1 522 aa9.96□□□□□ -0.82
LSM5-201ENST00000223084 TSSC4Q9Y5U2 329 aaPredicted RBP9.96□□□□□ -0.82
LSM5-201ENST00000223084 NOTCH3Q9UM47 2321 aa9.96□□□□□ -0.82
LSM5-201ENST00000223084 CCDC160A6NGH7 325 aa9.95□□□□□ -0.82
LSM5-201ENST00000223084 SHOXO15266 292 aa9.95□□□□□ -0.82
LSM5-201ENST00000223084 TNFSF12O43508 249 aa9.95□□□□□ -0.82
LSM5-201ENST00000223084 FCGR3BO75015 233 aa9.95□□□□□ -0.82
LSM5-201ENST00000223084 SLC22A5O76082 557 aa9.95□□□□□ -0.82
LSM5-201ENST00000223084 CRYZL1O95825 349 aa9.95□□□□□ -0.82
LSM5-201ENST00000223084 OPN1MWP04001 364 aa9.95□□□□□ -0.82
LSM5-201ENST00000223084 IGF1P05019 195 aa9.95□□□□□ -0.82
LSM5-201ENST00000223084 OPN1MW2P0DN77 364 aa9.95□□□□□ -0.82
LSM5-201ENST00000223084 OPN1MW3P0DN78 364 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms