RNA–Protein interactions for RNA: ENST00000221973.7

LIM2-201, Transcript of lens intrinsic membrane protein 2, humanhuman

TSL 1 (best) BASIC

Gene LIM2, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-201ENST00000221973 SGMS2Q8NHU3 365 aa13.19□□□□□ -0.3
LIM2-201ENST00000221973 GPHA2Q96T91 129 aa13.19□□□□□ -0.3
LIM2-201ENST00000221973 NABP2Q9BQ15 211 aa13.19□□□□□ -0.3
LIM2-201ENST00000221973 DNAJC9-AS1A6NH13 148 aa13.18□□□□□ -0.3
LIM2-201ENST00000221973 CT45A6P0DMU7 189 aa13.18□□□□□ -0.3
LIM2-201ENST00000221973 CT45A5P0DMU8 189 aa13.18□□□□□ -0.3
LIM2-201ENST00000221973 CT45A7P0DMV0 189 aa13.18□□□□□ -0.3
LIM2-201ENST00000221973 PI3P19957 117 aa13.18□□□□□ -0.3
LIM2-201ENST00000221973 CD24P25063 80 aa13.18□□□□□ -0.3
LIM2-201ENST00000221973 BTCP35070 178 aa13.18□□□□□ -0.3
LIM2-201ENST00000221973 MSMO1Q15800 293 aa13.18□□□□□ -0.3
LIM2-201ENST00000221973 LRRC75BQ2VPJ9 315 aa13.18□□□□□ -0.3
LIM2-201ENST00000221973 PHLDA2Q53GA4 152 aa13.18□□□□□ -0.3
LIM2-201ENST00000221973 Q6YL49 198 aa13.18□□□□□ -0.3
LIM2-201ENST00000221973 RBMXL1Q96E39 390 aaKnown RBP13.18□□□□□ -0.3
LIM2-201ENST00000221973 AKR1E2Q96JD6 320 aa13.18□□□□□ -0.3
LIM2-201ENST00000221973 DUX5Q96PT3 197 aa13.18□□□□□ -0.3
LIM2-201ENST00000221973 SSX3Q99909 188 aa13.18□□□□□ -0.3
LIM2-201ENST00000221973 RSRP1Q9BUV0 290 aa13.18□□□□□ -0.3
LIM2-201ENST00000221973 CMYA5Q8N3K9 4069 aa13.18□□□□□ -0.3
LIM2-201ENST00000221973 GPR31O00270 319 aa13.17□□□□□ -0.3
LIM2-201ENST00000221973 BRS3P32247 399 aa13.17□□□□□ -0.3
LIM2-201ENST00000221973 ECI1P42126 302 aa13.17□□□□□ -0.3
LIM2-201ENST00000221973 RPL30P62888 115 aaKnown RBP13.17□□□□□ -0.3
LIM2-201ENST00000221973 ASAH1Q13510 395 aa13.17□□□□□ -0.3
LIM2-201ENST00000221973 MZT2BQ6NZ67 158 aa13.17□□□□□ -0.3
LIM2-201ENST00000221973 RBMS3Q6XE24 437 aaKnown RBP13.17□□□□□ -0.3
LIM2-201ENST00000221973 CMTM1Q8IZ96 169 aa13.17□□□□□ -0.3
LIM2-201ENST00000221973 ZNF383Q8NA42 475 aa13.17□□□□□ -0.3
LIM2-201ENST00000221973 ZBTB34Q8NCN2 500 aa13.17□□□□□ -0.3
LIM2-201ENST00000221973 BVESQ8NE79 360 aa13.17□□□□□ -0.3
LIM2-201ENST00000221973 ZFAND1Q8TCF1 268 aa13.17□□□□□ -0.3
LIM2-201ENST00000221973 CAPSLQ8WWF8 208 aa13.17□□□□□ -0.3
LIM2-201ENST00000221973 CFHR4Q92496 578 aa13.17□□□□□ -0.3
LIM2-201ENST00000221973 ZNF747Q9BV97 191 aa13.17□□□□□ -0.3
LIM2-201ENST00000221973 PRDM13Q9H4Q3 707 aa13.17□□□□□ -0.3
LIM2-201ENST00000221973 TNFRSF19Q9NS68 423 aa13.17□□□□□ -0.3
LIM2-201ENST00000221973 VGLL3A8MV65 326 aa13.16□□□□□ -0.3
LIM2-201ENST00000221973 H3BUX3 64 aa13.16□□□□□ -0.3
LIM2-201ENST00000221973 HOXA3O43365 443 aaPredicted RBP13.16□□□□□ -0.3
LIM2-201ENST00000221973 PGLYRP1O75594 196 aaPredicted RBP13.16□□□□□ -0.3
LIM2-201ENST00000221973 IGHV4-59P01825 116 aa13.16□□□□□ -0.3
LIM2-201ENST00000221973 DUTP33316 252 aaKnown RBP13.16□□□□□ -0.3
LIM2-201ENST00000221973 THBS3P49746 956 aa13.16□□□□□ -0.3
LIM2-201ENST00000221973 EIF4EBP1Q13541 118 aaPredicted RBP13.16□□□□□ -0.3
LIM2-201ENST00000221973 ABCA11PQ4W5N1 156 aa13.16□□□□□ -0.3
LIM2-201ENST00000221973 POC5Q8NA72 575 aa13.16□□□□□ -0.3
LIM2-201ENST00000221973 TCTEX1D2Q8WW35 142 aa13.16□□□□□ -0.3
LIM2-201ENST00000221973 GPR132Q9UNW8 380 aa13.16□□□□□ -0.3
LIM2-201ENST00000221973 C14orf166Q9Y224 244 aaKnown RBP13.16□□□□□ -0.3
LIM2-201ENST00000221973 VSIG4Q9Y279 399 aa13.16□□□□□ -0.3
LIM2-201ENST00000221973 LINC00473A8K010 186 aa13.15□□□□□ -0.3
LIM2-201ENST00000221973 H0YJW9 148 aa13.15□□□□□ -0.3
LIM2-201ENST00000221973 RLN1P04808 185 aa13.15□□□□□ -0.3
LIM2-201ENST00000221973 CTSDP07339 412 aaPredicted RBP13.15□□□□□ -0.3
LIM2-201ENST00000221973 S100GP29377 79 aa13.15□□□□□ -0.3
LIM2-201ENST00000221973 IER3P46695 156 aa13.15□□□□□ -0.3
LIM2-201ENST00000221973 DYNLT3P51808 116 aa13.15□□□□□ -0.3
LIM2-201ENST00000221973 PIGPP57054 158 aa13.15□□□□□ -0.3
LIM2-201ENST00000221973 DEFA1P59665 94 aa13.15□□□□□ -0.3
LIM2-201ENST00000221973 DEFA3P59666 94 aa13.15□□□□□ -0.3
LIM2-201ENST00000221973 RBMS2Q15434 407 aaKnown RBP13.15□□□□□ -0.3
LIM2-201ENST00000221973 SURF2Q15527 256 aaPredicted RBP13.15□□□□□ -0.3
LIM2-201ENST00000221973 OR2B11Q5JQS5 317 aa13.15□□□□□ -0.3
LIM2-201ENST00000221973 PRR31Q5SQ13 230 aa13.15□□□□□ -0.3
LIM2-201ENST00000221973 ZNF66Q6ZN08 573 aa13.15□□□□□ -0.3
LIM2-201ENST00000221973 KCTD9Q7L273 389 aa13.15□□□□□ -0.3
LIM2-201ENST00000221973 OR51H1Q8NH63 302 aa13.15□□□□□ -0.3
LIM2-201ENST00000221973 PIFOQ8TCI5 191 aa13.15□□□□□ -0.3
LIM2-201ENST00000221973 TAF15Q92804 592 aaKnown RBP eCLIP13.15□□□□□ -0.3
LIM2-201ENST00000221973 ADTRPQ96IZ2 230 aa13.15□□□□□ -0.3
LIM2-201ENST00000221973 SCGB3A2Q96PL1 93 aa13.15□□□□□ -0.3
LIM2-201ENST00000221973 HSD17B10Q99714 261 aaKnown RBP13.15□□□□□ -0.3
LIM2-201ENST00000221973 SLC25A21Q9BQT8 299 aaPredicted RBP13.15□□□□□ -0.3
LIM2-201ENST00000221973 RTBDNQ9BSG5 229 aaPredicted RBP13.15□□□□□ -0.3
LIM2-201ENST00000221973 DPAGT1Q9H3H5 408 aa13.15□□□□□ -0.3
LIM2-201ENST00000221973 SLC2A9Q9NRM0 540 aa13.15□□□□□ -0.3
LIM2-201ENST00000221973 FAM240BA0A1B0GVZ2 78 aa13.14□□□□□ -0.31
LIM2-201ENST00000221973 H7C2Y5 167 aa13.14□□□□□ -0.31
LIM2-201ENST00000221973 KCNAB3O43448 404 aa13.14□□□□□ -0.31
LIM2-201ENST00000221973 NDUFB6O95139 128 aa13.14□□□□□ -0.31
LIM2-201ENST00000221973 IGKV1D-33P01593 117 aa13.14□□□□□ -0.31
LIM2-201ENST00000221973 IGKV1-33P01594 117 aa13.14□□□□□ -0.31
LIM2-201ENST00000221973 APOA2P02652 100 aa13.14□□□□□ -0.31
LIM2-201ENST00000221973 SNRNP70P08621 437 aaKnown RBP13.14□□□□□ -0.31
LIM2-201ENST00000221973 CD1BP29016 333 aa13.14□□□□□ -0.31
LIM2-201ENST00000221973 FOXL1Q12952 345 aa13.14□□□□□ -0.31
LIM2-201ENST00000221973 HES1Q14469 280 aa13.14□□□□□ -0.31
LIM2-201ENST00000221973 HABP2Q14520 560 aaPredicted RBP13.14□□□□□ -0.31
LIM2-201ENST00000221973 HNF4GQ14541 408 aa13.14□□□□□ -0.31
LIM2-201ENST00000221973 LY6EQ16553 131 aa13.14□□□□□ -0.31
LIM2-201ENST00000221973 AANATQ16613 207 aa13.14□□□□□ -0.31
LIM2-201ENST00000221973 FBLN7Q53RD9 439 aa13.14□□□□□ -0.31
LIM2-201ENST00000221973 TBC1D26Q86UD7 250 aa13.14□□□□□ -0.31
LIM2-201ENST00000221973 OR5AN1Q8NGI8 311 aa13.14□□□□□ -0.31
LIM2-201ENST00000221973 SSMEM1Q8WWF3 244 aa13.14□□□□□ -0.31
LIM2-201ENST00000221973 ZNF486Q96H40 463 aaPredicted RBP13.14□□□□□ -0.31
LIM2-201ENST00000221973 C5orf66Q9H5L9 145 aa13.14□□□□□ -0.31
LIM2-201ENST00000221973 SLC35D1Q9NTN3 355 aa13.14□□□□□ -0.31
LIM2-201ENST00000221973 COPZ2Q9P299 210 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms