RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 GP6Q9HCN6 339 aa9.66□□□□□ -0.86
USP31-201ENST00000219689 PXMP4Q9Y6I8 212 aa9.66□□□□□ -0.86
USP31-201ENST00000219689 NGFP01138 241 aa9.66□□□□□ -0.86
USP31-201ENST00000219689 CA3P07451 260 aa9.66□□□□□ -0.86
USP31-201ENST00000219689 MAP1LC3AQ9H492 121 aa9.66□□□□□ -0.86
USP31-201ENST00000219689 SH2D7A6NKC9 451 aaPredicted RBP9.66□□□□□ -0.86
USP31-201ENST00000219689 PRSS2P07478 247 aa9.66□□□□□ -0.86
USP31-201ENST00000219689 C1QL3Q5VWW1 255 aa9.66□□□□□ -0.86
USP31-201ENST00000219689 DEFB132Q7Z7B7 95 aa9.66□□□□□ -0.86
USP31-201ENST00000219689 A0A1W2PPE3 182 aa9.66□□□□□ -0.86
USP31-201ENST00000219689 NPSP0C0P6 89 aa9.66□□□□□ -0.86
USP31-201ENST00000219689 PGFP49763 221 aa9.66□□□□□ -0.86
USP31-201ENST00000219689 HOXA4Q00056 320 aaPredicted RBP9.66□□□□□ -0.86
USP31-201ENST00000219689 COX5BP10606 129 aa9.66□□□□□ -0.86
USP31-201ENST00000219689 MRGPRDQ8TDS7 321 aa9.66□□□□□ -0.86
USP31-201ENST00000219689 MMP25Q9NPA2 562 aa9.66□□□□□ -0.86
USP31-201ENST00000219689 KIAA0040Q15053 153 aa9.66□□□□□ -0.86
USP31-201ENST00000219689 PRSS8Q16651 343 aa9.66□□□□□ -0.86
USP31-201ENST00000219689 SAMD5Q5TGI4 173 aa9.66□□□□□ -0.86
USP31-201ENST00000219689 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.66□□□□□ -0.86
USP31-201ENST00000219689 NT5CQ8TCD5 201 aa9.66□□□□□ -0.86
USP31-201ENST00000219689 GPR6P46095 362 aaPredicted RBP9.65□□□□□ -0.86
USP31-201ENST00000219689 ONECUT1Q9UBC0 465 aa9.65□□□□□ -0.86
USP31-201ENST00000219689 RBFOX2O43251 390 aaKnown RBP eCLIP9.65□□□□□ -0.86
USP31-201ENST00000219689 S1PR2O95136 353 aa9.65□□□□□ -0.86
USP31-201ENST00000219689 AMBPP02760 352 aa9.65□□□□□ -0.86
USP31-201ENST00000219689 WDYHV1Q96HA8 205 aa9.65□□□□□ -0.86
USP31-201ENST00000219689 TBC1D29Q9UFV1 150 aa9.65□□□□□ -0.86
USP31-201ENST00000219689 TRAV8-4A0A0B4J246 113 aa9.65□□□□□ -0.86
USP31-201ENST00000219689 C5orf30Q96GV9 206 aa9.65□□□□□ -0.86
USP31-201ENST00000219689 C5orf66Q9H5L9 145 aa9.65□□□□□ -0.86
USP31-201ENST00000219689 PGPEP1LA6NFU8 196 aa9.65□□□□□ -0.86
USP31-201ENST00000219689 PLPP3O14495 311 aa9.65□□□□□ -0.86
USP31-201ENST00000219689 HYAL1Q12794 435 aa9.65□□□□□ -0.86
USP31-201ENST00000219689 FAM181AQ8N9Y4 354 aa9.65□□□□□ -0.86
USP31-201ENST00000219689 BAHD1Q8TBE0 780 aaPredicted RBP9.65□□□□□ -0.86
USP31-201ENST00000219689 NAA38Q9BRA0 125 aaKnown RBP9.65□□□□□ -0.86
USP31-201ENST00000219689 DCAF12Q5T6F0 453 aa9.65□□□□□ -0.86
USP31-201ENST00000219689 C18orf15Q96N68 181 aa9.65□□□□□ -0.86
USP31-201ENST00000219689 K7ESF4 209 aa9.65□□□□□ -0.86
USP31-201ENST00000219689 UNQ5815/PRO19632Q6UWF5 114 aa9.65□□□□□ -0.86
USP31-201ENST00000219689 RTL10Q7L3V2 364 aa9.65□□□□□ -0.86
USP31-201ENST00000219689 MNX1P50219 401 aaPredicted RBP9.65□□□□□ -0.87
USP31-201ENST00000219689 NANOS3P60323 173 aaKnown RBP9.65□□□□□ -0.87
USP31-201ENST00000219689 WFDC3Q8IUB2 231 aa9.65□□□□□ -0.87
USP31-201ENST00000219689 ATXN7O15265 892 aaPredicted RBP9.65□□□□□ -0.87
USP31-201ENST00000219689 CD8AP01732 235 aa9.65□□□□□ -0.87
USP31-201ENST00000219689 CXorf66Q5JRM2 361 aaPredicted RBP9.65□□□□□ -0.87
USP31-201ENST00000219689 SGK494Q96LW2 274 aa9.65□□□□□ -0.87
USP31-201ENST00000219689 TNFSF13O75888 250 aa9.64□□□□□ -0.87
USP31-201ENST00000219689 LINC00869P0C866 280 aa9.64□□□□□ -0.87
USP31-201ENST00000219689 HTN1P15515 57 aa9.64□□□□□ -0.87
USP31-201ENST00000219689 CENPWQ5EE01 88 aa9.64□□□□□ -0.87
USP31-201ENST00000219689 LOXL4Q96JB6 756 aa9.64□□□□□ -0.87
USP31-201ENST00000219689 FOXF1Q12946 379 aa9.64□□□□□ -0.87
USP31-201ENST00000219689 LRRC10Q5BKY1 277 aa9.64□□□□□ -0.87
USP31-201ENST00000219689 PPIAL4EA0A075B759 164 aa9.64□□□□□ -0.87
USP31-201ENST00000219689 NDUFA3O95167 84 aa9.64□□□□□ -0.87
USP31-201ENST00000219689 PPIAL4FP0DN26 164 aa9.64□□□□□ -0.87
USP31-201ENST00000219689 KLHDC2Q9Y2U9 406 aa9.64□□□□□ -0.87
USP31-201ENST00000219689 PPIAL4AQ9Y536 164 aa9.64□□□□□ -0.87
USP31-201ENST00000219689 LYZL6O75951 148 aa9.64□□□□□ -0.87
USP31-201ENST00000219689 CD38P28907 300 aa9.64□□□□□ -0.87
USP31-201ENST00000219689 LINC00696Q6ZRV3 163 aa9.64□□□□□ -0.87
USP31-201ENST00000219689 BHLHA15Q7RTS1 189 aaPredicted RBP9.64□□□□□ -0.87
USP31-201ENST00000219689 ASB10Q8WXI3 467 aa9.64□□□□□ -0.87
USP31-201ENST00000219689 ZNF391Q9UJN7 358 aa9.64□□□□□ -0.87
USP31-201ENST00000219689 PSMG3Q9BT73 122 aaPredicted RBP9.64□□□□□ -0.87
USP31-201ENST00000219689 UBE2ZQ9H832 354 aaPredicted RBP9.64□□□□□ -0.87
USP31-201ENST00000219689 A0A0U1RQV5 110 aa9.64□□□□□ -0.87
USP31-201ENST00000219689 C1QCP02747 245 aa9.64□□□□□ -0.87
USP31-201ENST00000219689 LSM6P62312 80 aaKnown RBP9.64□□□□□ -0.87
USP31-201ENST00000219689 TMEM155Q4W5P6 130 aa9.64□□□□□ -0.87
USP31-201ENST00000219689 WBP2Q969T9 261 aa9.64□□□□□ -0.87
USP31-201ENST00000219689 ADAMTSL3P82987 1691 aa9.64□□□□□ -0.87
USP31-201ENST00000219689 GAGE12BA1L429 117 aa9.64□□□□□ -0.87
USP31-201ENST00000219689 FRG2CA6NGY1 282 aa9.64□□□□□ -0.87
USP31-201ENST00000219689 GNB2P62879 340 aa9.64□□□□□ -0.87
USP31-201ENST00000219689 G6PC2Q9NQR9 355 aa9.64□□□□□ -0.87
USP31-201ENST00000219689 SPINK8P0C7L1 97 aa9.64□□□□□ -0.87
USP31-201ENST00000219689 ZNF793Q6ZN11 406 aa9.64□□□□□ -0.87
USP31-201ENST00000219689 ZNF48Q96MX3 618 aaPredicted RBP9.64□□□□□ -0.87
USP31-201ENST00000219689 TUBA4BQ9H853 241 aa9.64□□□□□ -0.87
USP31-201ENST00000219689 LHX9Q9NQ69 397 aa9.64□□□□□ -0.87
USP31-201ENST00000219689 KLRC4-KLRK1H3BQV0 150 aa9.64□□□□□ -0.87
USP31-201ENST00000219689 EREGO14944 169 aa9.64□□□□□ -0.87
USP31-201ENST00000219689 EML2O95834 649 aa9.64□□□□□ -0.87
USP31-201ENST00000219689 EGR1P18146 543 aa9.64□□□□□ -0.87
USP31-201ENST00000219689 RBPJQ06330 500 aa9.64□□□□□ -0.87
USP31-201ENST00000219689 TEPPQ6URK8 271 aa9.64□□□□□ -0.87
USP31-201ENST00000219689 NOTCH4Q99466 2003 aa9.63□□□□□ -0.87
USP31-201ENST00000219689 SLC23A3Q6PIS1 610 aa9.63□□□□□ -0.87
USP31-201ENST00000219689 ZNF788Q6ZQV5 615 aa9.63□□□□□ -0.87
USP31-201ENST00000219689 C6orf106Q9H6K1 298 aaPredicted RBP9.63□□□□□ -0.87
USP31-201ENST00000219689 GEMIN7Q9H840 131 aaKnown RBP9.63□□□□□ -0.87
USP31-201ENST00000219689 TIMM23BQ5SRD1 257 aa9.63□□□□□ -0.87
USP31-201ENST00000219689 MMD2Q8IY49 270 aa9.63□□□□□ -0.87
USP31-201ENST00000219689 RASL11BQ9BPW5 248 aa9.63□□□□□ -0.87
USP31-201ENST00000219689 REG4Q9BYZ8 158 aa9.63□□□□□ -0.87
USP31-201ENST00000219689 TRAV14DV4A0A0A6YYC5 116 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms