RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 EEF1AKMT3Q96AZ1 226 aa16.24■□□□□ 0.19
SMPD3-201ENST00000219334 ZNF841Q6ZN19 808 aa16.24■□□□□ 0.19
SMPD3-201ENST00000219334 TMEM45BQ96B21 275 aa16.24■□□□□ 0.19
SMPD3-201ENST00000219334 SCMH1Q96GD3 660 aa16.24■□□□□ 0.19
SMPD3-201ENST00000219334 TMEM106BQ9NUM4 274 aa16.24■□□□□ 0.19
SMPD3-201ENST00000219334 FAM206AQ9NX38 181 aa16.24■□□□□ 0.19
SMPD3-201ENST00000219334 RAXQ9Y2V3 346 aa16.24■□□□□ 0.19
SMPD3-201ENST00000219334 TRAV34A0A0B4J273 112 aa16.24■□□□□ 0.19
SMPD3-201ENST00000219334 IGLV3-19P01714 112 aa16.24■□□□□ 0.19
SMPD3-201ENST00000219334 TSPOP30536 169 aa16.24■□□□□ 0.19
SMPD3-201ENST00000219334 RELQ04864 619 aaPredicted RBP16.24■□□□□ 0.19
SMPD3-201ENST00000219334 LSM10Q969L4 123 aaKnown RBP16.24■□□□□ 0.19
SMPD3-201ENST00000219334 GLIPR1P48060 266 aa16.24■□□□□ 0.19
SMPD3-201ENST00000219334 MEOX2P50222 304 aa16.24■□□□□ 0.19
SMPD3-201ENST00000219334 FXYD3Q14802 87 aa16.24■□□□□ 0.19
SMPD3-201ENST00000219334 C10orf128Q5T292 105 aa16.24■□□□□ 0.19
SMPD3-201ENST00000219334 FGFRL1Q8N441 504 aa16.24■□□□□ 0.19
SMPD3-201ENST00000219334 TMEM54Q969K7 222 aa16.24■□□□□ 0.19
SMPD3-201ENST00000219334 C5orf52A6NGY3 159 aa16.23■□□□□ 0.19
SMPD3-201ENST00000219334 PGLYRP1O75594 196 aaPredicted RBP16.23■□□□□ 0.19
SMPD3-201ENST00000219334 PLAUP00749 431 aa16.23■□□□□ 0.19
SMPD3-201ENST00000219334 TNFSF10P50591 281 aa16.23■□□□□ 0.19
SMPD3-201ENST00000219334 C1orf100Q5SVJ3 147 aa16.23■□□□□ 0.19
SMPD3-201ENST00000219334 ZNF880Q6PDB4 577 aa16.23■□□□□ 0.19
SMPD3-201ENST00000219334 HSD17B13Q7Z5P4 300 aaPredicted RBP16.23■□□□□ 0.19
SMPD3-201ENST00000219334 OR5AU1Q8NGC0 362 aa16.23■□□□□ 0.19
SMPD3-201ENST00000219334 TNFSF18Q9UNG2 199 aa16.23■□□□□ 0.19
SMPD3-201ENST00000219334 A8MWL6 223 aa16.23■□□□□ 0.19
SMPD3-201ENST00000219334 LEAP2Q969E1 77 aa16.23■□□□□ 0.19
SMPD3-201ENST00000219334 HSF4Q9ULV5 492 aa16.23■□□□□ 0.19
SMPD3-201ENST00000219334 APCSP02743 223 aa16.23■□□□□ 0.19
SMPD3-201ENST00000219334 UNC119Q13432 240 aa16.23■□□□□ 0.19
SMPD3-201ENST00000219334 RCC1P18754 421 aaPredicted RBP16.23■□□□□ 0.19
SMPD3-201ENST00000219334 IER3P46695 156 aa16.23■□□□□ 0.19
SMPD3-201ENST00000219334 RAB9AP51151 201 aa16.23■□□□□ 0.19
SMPD3-201ENST00000219334 APCDD1LQ8NCL9 501 aa16.23■□□□□ 0.19
SMPD3-201ENST00000219334 HSPB7Q9UBY9 170 aa16.23■□□□□ 0.19
SMPD3-201ENST00000219334 HSPB8Q9UJY1 196 aa16.23■□□□□ 0.19
SMPD3-201ENST00000219334 CHCHD2Q9Y6H1 151 aaPredicted RBP16.23■□□□□ 0.19
SMPD3-201ENST00000219334 ADAMTS7Q9UKP4 1686 aa16.23■□□□□ 0.19
SMPD3-201ENST00000219334 CELA3AP09093 270 aa16.22■□□□□ 0.19
SMPD3-201ENST00000219334 NPPCP23582 126 aa16.22■□□□□ 0.19
SMPD3-201ENST00000219334 RBKSQ9H477 322 aa16.22■□□□□ 0.19
SMPD3-201ENST00000219334 SNURFLB1AK76 121 aa16.22■□□□□ 0.19
SMPD3-201ENST00000219334 RBM38Q9H0Z9 239 aaKnown RBP16.22■□□□□ 0.19
SMPD3-201ENST00000219334 H1FOOQ8IZA3 346 aaPredicted RBP16.22■□□□□ 0.19
SMPD3-201ENST00000219334 ZNF418Q8TF45 676 aaPredicted RBP16.22■□□□□ 0.19
SMPD3-201ENST00000219334 HOXA6P31267 233 aa16.22■□□□□ 0.19
SMPD3-201ENST00000219334 MEGF10Q96KG7 1140 aa16.22■□□□□ 0.19
SMPD3-201ENST00000219334 TMEM252Q8N6L7 170 aa16.22■□□□□ 0.19
SMPD3-201ENST00000219334 DSPPQ9NZW4 1301 aa16.22■□□□□ 0.19
SMPD3-201ENST00000219334 IGKV1D-42A0A075B6H8 117 aa16.21■□□□□ 0.19
SMPD3-201ENST00000219334 M0R3E3 92 aa16.21■□□□□ 0.19
SMPD3-201ENST00000219334 SSTR5P35346 364 aa16.21■□□□□ 0.19
SMPD3-201ENST00000219334 PSG9Q00887 426 aa16.21■□□□□ 0.19
SMPD3-201ENST00000219334 PGPA6NDG6 321 aa16.21■□□□□ 0.19
SMPD3-201ENST00000219334 NPIPB13A6NJU9 1138 aa16.21■□□□□ 0.19
SMPD3-201ENST00000219334 NPIPB4C9JG80 1138 aa16.21■□□□□ 0.19
SMPD3-201ENST00000219334 SNRPD3P62318 126 aaKnown RBP16.21■□□□□ 0.19
SMPD3-201ENST00000219334 UNQ9370/PRO34162Q6UXP9 181 aa16.21■□□□□ 0.19
SMPD3-201ENST00000219334 OR8A1Q8NGG7 326 aa16.21■□□□□ 0.19
SMPD3-201ENST00000219334 DPH3Q96FX2 82 aa16.21■□□□□ 0.19
SMPD3-201ENST00000219334 ST6GAL2Q96JF0 529 aa16.21■□□□□ 0.19
SMPD3-201ENST00000219334 SSBP3Q9BWW4 388 aaPredicted RBP16.21■□□□□ 0.19
SMPD3-201ENST00000219334 LMX1BO60663 402 aa16.21■□□□□ 0.19
SMPD3-201ENST00000219334 PLAURQ03405 335 aa16.21■□□□□ 0.19
SMPD3-201ENST00000219334 C1orf162Q8NEQ5 155 aaPredicted RBP16.21■□□□□ 0.19
SMPD3-201ENST00000219334 TUBA4BQ9H853 241 aa16.21■□□□□ 0.19
SMPD3-201ENST00000219334 AURKAIP1Q9NWT8 199 aaPredicted RBP16.21■□□□□ 0.19
SMPD3-201ENST00000219334 TMEM218A2RU14 115 aa16.21■□□□□ 0.18
SMPD3-201ENST00000219334 PLA2G10O15496 165 aa16.21■□□□□ 0.18
SMPD3-201ENST00000219334 LCN2P80188 198 aa16.21■□□□□ 0.18
SMPD3-201ENST00000219334 PQLC2Q6ZP29 291 aa16.21■□□□□ 0.18
SMPD3-201ENST00000219334 YAE1D1Q9NRH1 226 aa16.21■□□□□ 0.18
SMPD3-201ENST00000219334 EP300Q09472 2414 aaPredicted RBP16.21■□□□□ 0.18
SMPD3-201ENST00000219334 CECR9P0C854 216 aa16.2■□□□□ 0.18
SMPD3-201ENST00000219334 SUCLG1P53597 346 aaKnown RBP16.2■□□□□ 0.18
SMPD3-201ENST00000219334 SNRPEP62304 92 aaKnown RBP16.2■□□□□ 0.18
SMPD3-201ENST00000219334 WDFY1Q8IWB7 410 aa16.2■□□□□ 0.18
SMPD3-201ENST00000219334 ELOVL1Q9BW60 279 aa16.2■□□□□ 0.18
SMPD3-201ENST00000219334 KBTBD11O94819 623 aa16.2■□□□□ 0.18
SMPD3-201ENST00000219334 TGFAP01135 160 aa16.2■□□□□ 0.18
SMPD3-201ENST00000219334 IGHMP01871 453 aa16.2■□□□□ 0.18
SMPD3-201ENST00000219334 ACAA1P09110 424 aaPredicted RBP16.2■□□□□ 0.18
SMPD3-201ENST00000219334 COL11A2P13942 1736 aaPredicted RBP16.2■□□□□ 0.18
SMPD3-201ENST00000219334 MARCH11A6NNE9 402 aa16.2■□□□□ 0.18
SMPD3-201ENST00000219334 BSPH1Q075Z2 132 aa16.2■□□□□ 0.18
SMPD3-201ENST00000219334 FAM53AQ6NSI3 398 aaPredicted RBP16.2■□□□□ 0.18
SMPD3-201ENST00000219334 IL36RNQ9UBH0 155 aa16.2■□□□□ 0.18
SMPD3-201ENST00000219334 M0R143 59 aa16.2■□□□□ 0.18
SMPD3-201ENST00000219334 RPL29P47914 159 aaKnown RBP16.2■□□□□ 0.18
SMPD3-201ENST00000219334 OR4C5Q8NGB2 326 aa16.2■□□□□ 0.18
SMPD3-201ENST00000219334 H3BQ15 152 aa16.19■□□□□ 0.18
SMPD3-201ENST00000219334 KCNAB3O43448 404 aa16.19■□□□□ 0.18
SMPD3-201ENST00000219334 MFAP2P55001 183 aa16.19■□□□□ 0.18
SMPD3-201ENST00000219334 OR5P3Q8WZ94 311 aa16.19■□□□□ 0.18
SMPD3-201ENST00000219334 FAM90A26D6RGX4 464 aa16.19■□□□□ 0.18
SMPD3-201ENST00000219334 GCSHP23434 173 aa16.19■□□□□ 0.18
SMPD3-201ENST00000219334 COL5A3P25940 1745 aaPredicted RBP16.19■□□□□ 0.18
SMPD3-201ENST00000219334 RUNX1Q01196 453 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms