RNA–Protein interactions for RNA: ENST00000218388.8

TIMP1-201, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP1, Length 892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-201ENST00000218388 PLA2G10O15496 165 aa10.6□□□□□ -0.71
TIMP1-201ENST00000218388 IGLV2-14P01704 120 aa10.6□□□□□ -0.71
TIMP1-201ENST00000218388 CTSDP07339 412 aaPredicted RBP10.6□□□□□ -0.71
TIMP1-201ENST00000218388 PAX6P26367 422 aa10.6□□□□□ -0.71
TIMP1-201ENST00000218388 KIR2DS2P43631 304 aa10.6□□□□□ -0.71
TIMP1-201ENST00000218388 IER3P46695 156 aa10.6□□□□□ -0.71
TIMP1-201ENST00000218388 RND3P61587 244 aa10.6□□□□□ -0.71
TIMP1-201ENST00000218388 HES1Q14469 280 aa10.6□□□□□ -0.71
TIMP1-201ENST00000218388 PHLDA2Q53GA4 152 aa10.6□□□□□ -0.71
TIMP1-201ENST00000218388 LCE2DQ5TA82 110 aaPredicted RBP10.6□□□□□ -0.71
TIMP1-201ENST00000218388 C11orf88Q6PI97 169 aa10.6□□□□□ -0.71
TIMP1-201ENST00000218388 ZDHHC22Q8N966 263 aa10.6□□□□□ -0.71
TIMP1-201ENST00000218388 POC5Q8NA72 575 aa10.6□□□□□ -0.71
TIMP1-201ENST00000218388 DRAXINQ8NBI3 349 aaPredicted RBP10.6□□□□□ -0.71
TIMP1-201ENST00000218388 TCTEX1D2Q8WW35 142 aa10.6□□□□□ -0.71
TIMP1-201ENST00000218388 CFHR4Q92496 578 aa10.6□□□□□ -0.71
TIMP1-201ENST00000218388 C5orf30Q96GV9 206 aa10.6□□□□□ -0.71
TIMP1-201ENST00000218388 SLC2A9Q9NRM0 540 aa10.6□□□□□ -0.71
TIMP1-201ENST00000218388 SLC35D1Q9NTN3 355 aa10.6□□□□□ -0.71
TIMP1-201ENST00000218388 COPZ2Q9P299 210 aa10.6□□□□□ -0.71
TIMP1-201ENST00000218388 WASHC3Q9Y3C0 194 aa10.6□□□□□ -0.71
TIMP1-201ENST00000218388 ANK3Q12955 4377 aaKnown RBP10.59□□□□□ -0.71
TIMP1-201ENST00000218388 IGHV3-72A0A0B4J1Y9 119 aa10.59□□□□□ -0.71
TIMP1-201ENST00000218388 FAM90A9PA6NNJ1 464 aa10.59□□□□□ -0.71
TIMP1-201ENST00000218388 H0YJW9 148 aa10.59□□□□□ -0.71
TIMP1-201ENST00000218388 H7C2Y5 167 aa10.59□□□□□ -0.71
TIMP1-201ENST00000218388 HOXA3O43365 443 aaPredicted RBP10.59□□□□□ -0.71
TIMP1-201ENST00000218388 TNFSF12O43508 249 aa10.59□□□□□ -0.71
TIMP1-201ENST00000218388 TCF21O43680 179 aa10.59□□□□□ -0.71
TIMP1-201ENST00000218388 PROP1O75360 226 aa10.59□□□□□ -0.71
TIMP1-201ENST00000218388 PGLYRP1O75594 196 aaPredicted RBP10.59□□□□□ -0.71
TIMP1-201ENST00000218388 VENTXO95231 258 aa10.59□□□□□ -0.71
TIMP1-201ENST00000218388 MOSP00540 346 aa10.59□□□□□ -0.71
TIMP1-201ENST00000218388 IGHV4-59P01825 116 aa10.59□□□□□ -0.71
TIMP1-201ENST00000218388 SNRNP70P08621 437 aaKnown RBP10.59□□□□□ -0.71
TIMP1-201ENST00000218388 PIGPP57054 158 aa10.59□□□□□ -0.71
TIMP1-201ENST00000218388 HILS1P60008 231 aa10.59□□□□□ -0.71
TIMP1-201ENST00000218388 GLDNQ6ZMI3 551 aaPredicted RBP10.59□□□□□ -0.71
TIMP1-201ENST00000218388 LIAT1Q6ZQX7 453 aa10.59□□□□□ -0.71
TIMP1-201ENST00000218388 PDPNQ86YL7 162 aa10.59□□□□□ -0.71
TIMP1-201ENST00000218388 ZNF383Q8NA42 475 aa10.59□□□□□ -0.71
TIMP1-201ENST00000218388 OR5AN1Q8NGI8 311 aa10.59□□□□□ -0.71
TIMP1-201ENST00000218388 OR2T10Q8NGZ9 312 aa10.59□□□□□ -0.71
TIMP1-201ENST00000218388 CD300LFQ8TDQ1 290 aa10.59□□□□□ -0.71
TIMP1-201ENST00000218388 RAB18Q9NP72 206 aa10.59□□□□□ -0.71
TIMP1-201ENST00000218388 LIN7CQ9NUP9 197 aaKnown RBP10.59□□□□□ -0.71
TIMP1-201ENST00000218388 TBC1D24Q9ULP9 559 aa10.59□□□□□ -0.71
TIMP1-201ENST00000218388 GPR132Q9UNW8 380 aa10.59□□□□□ -0.71
TIMP1-201ENST00000218388 TCF19Q9Y242 345 aa10.59□□□□□ -0.71
TIMP1-201ENST00000218388 SVEP1Q4LDE5 3571 aa10.59□□□□□ -0.71
TIMP1-201ENST00000218388 FAM240BA0A1B0GVZ2 78 aa10.58□□□□□ -0.72
TIMP1-201ENST00000218388 CLDN34H7C241 214 aa10.58□□□□□ -0.72
TIMP1-201ENST00000218388 NDUFB6O95139 128 aa10.58□□□□□ -0.72
TIMP1-201ENST00000218388 IGKV1D-33P01593 117 aa10.58□□□□□ -0.72
TIMP1-201ENST00000218388 IGKV1-33P01594 117 aa10.58□□□□□ -0.72
TIMP1-201ENST00000218388 RLN1P04808 185 aa10.58□□□□□ -0.72
TIMP1-201ENST00000218388 TMEM11P17152 192 aa10.58□□□□□ -0.72
TIMP1-201ENST00000218388 BTCP35070 178 aa10.58□□□□□ -0.72
TIMP1-201ENST00000218388 CCR6P51684 374 aa10.58□□□□□ -0.72
TIMP1-201ENST00000218388 IFITM3Q01628 133 aa10.58□□□□□ -0.72
TIMP1-201ENST00000218388 EIF4EBP1Q13541 118 aaPredicted RBP10.58□□□□□ -0.72
TIMP1-201ENST00000218388 DCTN2Q13561 401 aaKnown RBP10.58□□□□□ -0.72
TIMP1-201ENST00000218388 DHRS7BQ6IAN0 325 aaPredicted RBP10.58□□□□□ -0.72
TIMP1-201ENST00000218388 C16orf82Q7Z2V1 217 aa10.58□□□□□ -0.72
TIMP1-201ENST00000218388 TCTEX1D1Q8N7M0 179 aa10.58□□□□□ -0.72
TIMP1-201ENST00000218388 OR51H1Q8NH63 302 aa10.58□□□□□ -0.72
TIMP1-201ENST00000218388 OR4S2Q8NH73 311 aa10.58□□□□□ -0.72
TIMP1-201ENST00000218388 ENKURQ8TC29 256 aa10.58□□□□□ -0.72
TIMP1-201ENST00000218388 MRGPRFQ96AM1 343 aa10.58□□□□□ -0.72
TIMP1-201ENST00000218388 VPREB3Q9UKI3 123 aa10.58□□□□□ -0.72
TIMP1-201ENST00000218388 TEX13DA0A0J9YY54 714 aaPredicted RBP10.57□□□□□ -0.72
TIMP1-201ENST00000218388 DNAJC9-AS1A6NH13 148 aa10.57□□□□□ -0.72
TIMP1-201ENST00000218388 LINC00473A8K010 186 aa10.57□□□□□ -0.72
TIMP1-201ENST00000218388 MPPED1O15442 326 aa10.57□□□□□ -0.72
TIMP1-201ENST00000218388 RBFOX2O43251 390 aaKnown RBP eCLIP10.57□□□□□ -0.72
TIMP1-201ENST00000218388 FCGR3BO75015 233 aa10.57□□□□□ -0.72
TIMP1-201ENST00000218388 B3GALNT1O75752 331 aa10.57□□□□□ -0.72
TIMP1-201ENST00000218388 PI3P19957 117 aa10.57□□□□□ -0.72
TIMP1-201ENST00000218388 F2RP25116 425 aa10.57□□□□□ -0.72
TIMP1-201ENST00000218388 SLC6A1P30531 599 aa10.57□□□□□ -0.72
TIMP1-201ENST00000218388 TAS2R31P59538 309 aa10.57□□□□□ -0.72
TIMP1-201ENST00000218388 EBI3Q14213 229 aa10.57□□□□□ -0.72
TIMP1-201ENST00000218388 LY6EQ16553 131 aa10.57□□□□□ -0.72
TIMP1-201ENST00000218388 TMED4Q7Z7H5 227 aa10.57□□□□□ -0.72
TIMP1-201ENST00000218388 TBC1D26Q86UD7 250 aa10.57□□□□□ -0.72
TIMP1-201ENST00000218388 OR8H1Q8NGG4 311 aa10.57□□□□□ -0.72
TIMP1-201ENST00000218388 OR4C13Q8NGP0 309 aa10.57□□□□□ -0.72
TIMP1-201ENST00000218388 DDB2Q92466 427 aa10.57□□□□□ -0.72
TIMP1-201ENST00000218388 FLYWCH2Q96CP2 140 aaKnown RBP10.57□□□□□ -0.72
TIMP1-201ENST00000218388 RNF5Q99942 180 aa10.57□□□□□ -0.72
TIMP1-201ENST00000218388 C5orf66Q9H5L9 145 aa10.57□□□□□ -0.72
TIMP1-201ENST00000218388 C1RLQ9NZP8 487 aa10.57□□□□□ -0.72
TIMP1-201ENST00000218388 VSIG4Q9Y279 399 aa10.57□□□□□ -0.72
TIMP1-201ENST00000218388 TEP1Q99973 2627 aaKnown RBP10.56□□□□□ -0.72
TIMP1-201ENST00000218388 A6NDX4 124 aa10.56□□□□□ -0.72
TIMP1-201ENST00000218388 OR2F2O95006 317 aa10.56□□□□□ -0.72
TIMP1-201ENST00000218388 CD24P25063 80 aa10.56□□□□□ -0.72
TIMP1-201ENST00000218388 RPL30P62888 115 aaKnown RBP10.56□□□□□ -0.72
TIMP1-201ENST00000218388 SLC9A3R2Q15599 337 aa10.56□□□□□ -0.72
TIMP1-201ENST00000218388 OR2B11Q5JQS5 317 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms