RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 COQ2Q96H96 371 aa11.14□□□□□ -0.63
SRP54-201ENST00000216774 LURAP1Q96LR2 239 aa11.14□□□□□ -0.63
SRP54-201ENST00000216774 OR4F4Q96R69 305 aa11.14□□□□□ -0.63
SRP54-201ENST00000216774 HSD17B10Q99714 261 aaKnown RBP11.14□□□□□ -0.63
SRP54-201ENST00000216774 CXXC4Q9H2H0 198 aa11.14□□□□□ -0.63
SRP54-201ENST00000216774 ARRDC1-AS1Q9H2J1 176 aa11.14□□□□□ -0.63
SRP54-201ENST00000216774 CHD3Q12873 2000 aaKnown RBP11.13□□□□□ -0.63
SRP54-201ENST00000216774 SMCO3A2RU48 225 aa11.13□□□□□ -0.63
SRP54-201ENST00000216774 PPP5D1E7EU14 171 aa11.13□□□□□ -0.63
SRP54-201ENST00000216774 IFNL4K9M1U5 179 aa11.13□□□□□ -0.63
SRP54-201ENST00000216774 MLNRO43193 412 aa11.13□□□□□ -0.63
SRP54-201ENST00000216774 TNFSF15O95150 251 aa11.13□□□□□ -0.63
SRP54-201ENST00000216774 HRASP01112 189 aa11.13□□□□□ -0.63
SRP54-201ENST00000216774 MPV17P39210 176 aa11.13□□□□□ -0.63
SRP54-201ENST00000216774 GALR1P47211 349 aa11.13□□□□□ -0.63
SRP54-201ENST00000216774 COA6Q5JTJ3 125 aaKnown RBP11.13□□□□□ -0.63
SRP54-201ENST00000216774 ACP7Q6ZNF0 438 aa11.13□□□□□ -0.63
SRP54-201ENST00000216774 OR5R1Q8NH85 324 aa11.13□□□□□ -0.63
SRP54-201ENST00000216774 DIRC2Q96SL1 478 aa11.13□□□□□ -0.63
SRP54-201ENST00000216774 LNP1A1A4G5 178 aa11.12□□□□□ -0.63
SRP54-201ENST00000216774 WNT9BO14905 357 aa11.12□□□□□ -0.63
SRP54-201ENST00000216774 HMGB3O15347 200 aaKnown RBP11.12□□□□□ -0.63
SRP54-201ENST00000216774 SOX15O60248 233 aa11.12□□□□□ -0.63
SRP54-201ENST00000216774 TUBG1P23258 451 aa11.12□□□□□ -0.63
SRP54-201ENST00000216774 GABRA2P47869 451 aa11.12□□□□□ -0.63
SRP54-201ENST00000216774 FAM3BP58499 235 aaPredicted RBP11.12□□□□□ -0.63
SRP54-201ENST00000216774 TFF3Q07654 80 aa11.12□□□□□ -0.63
SRP54-201ENST00000216774 TMEM249Q2WGJ8 235 aa11.12□□□□□ -0.63
SRP54-201ENST00000216774 Q6ZT83 130 aa11.12□□□□□ -0.63
SRP54-201ENST00000216774 TMEM178AQ8NBL3 297 aa11.12□□□□□ -0.63
SRP54-201ENST00000216774 RNASEH2CQ8TDP1 164 aaKnown RBP11.12□□□□□ -0.63
SRP54-201ENST00000216774 MRGPRDQ8TDS7 321 aa11.12□□□□□ -0.63
SRP54-201ENST00000216774 ZDHHC16Q969W1 377 aa11.12□□□□□ -0.63
SRP54-201ENST00000216774 NEIL1Q96FI4 390 aaPredicted RBP11.12□□□□□ -0.63
SRP54-201ENST00000216774 TUBG2Q9NRH3 451 aa11.12□□□□□ -0.63
SRP54-201ENST00000216774 GAB2Q9UQC2 676 aa11.12□□□□□ -0.63
SRP54-201ENST00000216774 LYZL6O75951 148 aa11.12□□□□□ -0.63
SRP54-201ENST00000216774 PKIAP61925 76 aa11.12□□□□□ -0.63
SRP54-201ENST00000216774 PAX5Q02548 391 aa11.12□□□□□ -0.63
SRP54-201ENST00000216774 HNF4GQ14541 408 aa11.12□□□□□ -0.63
SRP54-201ENST00000216774 ACOT6Q3I5F7 207 aaPredicted RBP11.12□□□□□ -0.63
SRP54-201ENST00000216774 TRAT1Q6PIZ9 186 aa11.12□□□□□ -0.63
SRP54-201ENST00000216774 BTNL3Q6UXE8 466 aa11.12□□□□□ -0.63
SRP54-201ENST00000216774 CLCF1Q9UBD9 225 aa11.12□□□□□ -0.63
SRP54-201ENST00000216774 WASF3Q9UPY6 502 aa11.12□□□□□ -0.63
SRP54-201ENST00000216774 AHCTF1Q8WYP5 2266 aa11.12□□□□□ -0.63
SRP54-201ENST00000216774 MARCH11A6NNE9 402 aa11.11□□□□□ -0.63
SRP54-201ENST00000216774 RBMXL2O75526 392 aaKnown RBP11.11□□□□□ -0.63
SRP54-201ENST00000216774 WISP2O76076 250 aa11.11□□□□□ -0.63
SRP54-201ENST00000216774 SRP14P37108 136 aaKnown RBP11.11□□□□□ -0.63
SRP54-201ENST00000216774 ARG2P78540 354 aa11.11□□□□□ -0.63
SRP54-201ENST00000216774 COL10A1Q03692 680 aa11.11□□□□□ -0.63
SRP54-201ENST00000216774 GAMTQ14353 236 aa11.11□□□□□ -0.63
SRP54-201ENST00000216774 AARDQ4LEZ3 155 aa11.11□□□□□ -0.63
SRP54-201ENST00000216774 FAM53AQ6NSI3 398 aaPredicted RBP11.11□□□□□ -0.63
SRP54-201ENST00000216774 WDR82Q6UXN9 313 aa11.11□□□□□ -0.63
SRP54-201ENST00000216774 Q6ZR03 302 aa11.11□□□□□ -0.63
SRP54-201ENST00000216774 ZNF826PQ6ZT77 177 aa11.11□□□□□ -0.63
SRP54-201ENST00000216774 FAM214BQ7L5A3 538 aa11.11□□□□□ -0.63
SRP54-201ENST00000216774 FAM216AQ8WUB2 273 aa11.11□□□□□ -0.63
SRP54-201ENST00000216774 S100PBPQ96BU1 408 aa11.11□□□□□ -0.63
SRP54-201ENST00000216774 ACY3Q96HD9 319 aa11.11□□□□□ -0.63
SRP54-201ENST00000216774 FAM90A9PA6NNJ1 464 aa11.11□□□□□ -0.63
SRP54-201ENST00000216774 DVL1O14640 695 aa11.11□□□□□ -0.63
SRP54-201ENST00000216774 IGKV3-15P01624 115 aa11.11□□□□□ -0.63
SRP54-201ENST00000216774 GYPAP02724 150 aa11.11□□□□□ -0.63
SRP54-201ENST00000216774 ADH4P08319 380 aa11.11□□□□□ -0.63
SRP54-201ENST00000216774 CD59P13987 128 aa11.11□□□□□ -0.63
SRP54-201ENST00000216774 HTD2P86397 168 aa11.11□□□□□ -0.63
SRP54-201ENST00000216774 SMIM21Q3B7S5 101 aa11.11□□□□□ -0.63
SRP54-201ENST00000216774 CXorf67Q86X51 503 aaPredicted RBP11.11□□□□□ -0.63
SRP54-201ENST00000216774 NECAP1Q8NC96 275 aa11.11□□□□□ -0.63
SRP54-201ENST00000216774 OR1P1Q8NH06 330 aa11.11□□□□□ -0.63
SRP54-201ENST00000216774 GATAD1Q8WUU5 269 aa11.11□□□□□ -0.63
SRP54-201ENST00000216774 DOCK7Q96N67 2140 aa11.1□□□□□ -0.63
SRP54-201ENST00000216774 LINC00473A8K010 186 aa11.1□□□□□ -0.63
SRP54-201ENST00000216774 TSTD3H0UI37 97 aa11.1□□□□□ -0.63
SRP54-201ENST00000216774 PDE6DO43924 150 aa11.1□□□□□ -0.63
SRP54-201ENST00000216774 PAGE4O60829 102 aa11.1□□□□□ -0.63
SRP54-201ENST00000216774 GGCTO75223 188 aaKnown RBP11.1□□□□□ -0.63
SRP54-201ENST00000216774 TYMSP04818 313 aa11.1□□□□□ -0.63
SRP54-201ENST00000216774 GZMHP20718 246 aa11.1□□□□□ -0.63
SRP54-201ENST00000216774 KITLGP21583 273 aa11.1□□□□□ -0.63
SRP54-201ENST00000216774 SSTR5P35346 364 aa11.1□□□□□ -0.63
SRP54-201ENST00000216774 CDC34P49427 236 aaPredicted RBP11.1□□□□□ -0.63
SRP54-201ENST00000216774 TMEM170AQ8WVE7 144 aa11.1□□□□□ -0.63
SRP54-201ENST00000216774 RAB1CQ92928 201 aa11.1□□□□□ -0.63
SRP54-201ENST00000216774 WDR83OSQ9Y284 106 aa11.1□□□□□ -0.63
SRP54-201ENST00000216774 C15orf62A8K5M9 175 aa11.1□□□□□ -0.63
SRP54-201ENST00000216774 C11orf94C9JXX5 98 aa11.1□□□□□ -0.63
SRP54-201ENST00000216774 SPINT2O43291 252 aa11.1□□□□□ -0.63
SRP54-201ENST00000216774 IFNA10P01566 189 aa11.1□□□□□ -0.63
SRP54-201ENST00000216774 CD99P14209 185 aa11.1□□□□□ -0.63
SRP54-201ENST00000216774 HOXC12P31275 282 aa11.1□□□□□ -0.63
SRP54-201ENST00000216774 GPX4P36969 197 aaPredicted RBP11.1□□□□□ -0.63
SRP54-201ENST00000216774 PMP22Q01453 160 aa11.1□□□□□ -0.63
SRP54-201ENST00000216774 JOSD1Q15040 202 aaPredicted RBP11.1□□□□□ -0.63
SRP54-201ENST00000216774 GUSBP1Q15486 140 aa11.1□□□□□ -0.63
SRP54-201ENST00000216774 Q3ZCU0 254 aa11.1□□□□□ -0.63
SRP54-201ENST00000216774 C1orf162Q8NEQ5 155 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms