RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 DCTN5Q9BTE1 182 aa12.75□□□□□ -0.37
SPTLC2-201ENST00000216484 PHF7Q9BWX1 381 aaPredicted RBP12.75□□□□□ -0.37
SPTLC2-201ENST00000216484 WIPI2Q9Y4P8 454 aa12.75□□□□□ -0.37
SPTLC2-201ENST00000216484 SRSF4Q08170 494 aaKnown RBP12.75□□□□□ -0.37
SPTLC2-201ENST00000216484 LRRC61Q9BV99 259 aa12.75□□□□□ -0.37
SPTLC2-201ENST00000216484 SRFP11831 508 aa12.75□□□□□ -0.37
SPTLC2-201ENST00000216484 CTLA4P16410 223 aa12.75□□□□□ -0.37
SPTLC2-201ENST00000216484 PAX2Q02962 417 aa12.75□□□□□ -0.37
SPTLC2-201ENST00000216484 C3AR1Q16581 482 aa12.75□□□□□ -0.37
SPTLC2-201ENST00000216484 LINC00596Q86U02 117 aa12.75□□□□□ -0.37
SPTLC2-201ENST00000216484 PGPA6NDG6 321 aa12.75□□□□□ -0.37
SPTLC2-201ENST00000216484 FGF9P31371 208 aaPredicted RBP12.75□□□□□ -0.37
SPTLC2-201ENST00000216484 C14orf144Q96I85 54 aa12.75□□□□□ -0.37
SPTLC2-201ENST00000216484 PLXND1Q9Y4D7 1925 aa12.75□□□□□ -0.37
SPTLC2-201ENST00000216484 C19orf67A6NJJ6 358 aa12.74□□□□□ -0.37
SPTLC2-201ENST00000216484 H3BRM9 83 aa12.74□□□□□ -0.37
SPTLC2-201ENST00000216484 SNAI2O43623 268 aa12.74□□□□□ -0.37
SPTLC2-201ENST00000216484 ZNF688P0C7X2 276 aa12.74□□□□□ -0.37
SPTLC2-201ENST00000216484 FAM89BQ8N5H3 189 aa12.74□□□□□ -0.37
SPTLC2-201ENST00000216484 MS4A4AQ96JQ5 239 aa12.74□□□□□ -0.37
SPTLC2-201ENST00000216484 PRR35P0CG20 571 aa12.74□□□□□ -0.37
SPTLC2-201ENST00000216484 TSPOP30536 169 aa12.74□□□□□ -0.37
SPTLC2-201ENST00000216484 MESTQ5EB52 335 aa12.74□□□□□ -0.37
SPTLC2-201ENST00000216484 C17orf47Q8NEP4 570 aa12.74□□□□□ -0.37
SPTLC2-201ENST00000216484 TINAGQ9UJW2 476 aa12.74□□□□□ -0.37
SPTLC2-201ENST00000216484 MUC4Q99102 2169 aa12.74□□□□□ -0.37
SPTLC2-201ENST00000216484 hCG_38984A0A1B0GV85 526 aa12.74□□□□□ -0.37
SPTLC2-201ENST00000216484 ASPDHA6ND91 283 aa12.74□□□□□ -0.37
SPTLC2-201ENST00000216484 OR11H12B2RN74 326 aa12.74□□□□□ -0.37
SPTLC2-201ENST00000216484 MVDP53602 400 aa12.74□□□□□ -0.37
SPTLC2-201ENST00000216484 SRSF6Q13247 344 aaKnown RBP12.74□□□□□ -0.37
SPTLC2-201ENST00000216484 OR11H1Q8NG94 326 aa12.74□□□□□ -0.37
SPTLC2-201ENST00000216484 OR11H2Q8NH07 326 aa12.74□□□□□ -0.37
SPTLC2-201ENST00000216484 WDFY2Q96P53 400 aa12.74□□□□□ -0.37
SPTLC2-201ENST00000216484 PLXNB1O43157 2135 aa12.74□□□□□ -0.37
SPTLC2-201ENST00000216484 REG1AP05451 166 aa12.74□□□□□ -0.37
SPTLC2-201ENST00000216484 DEGS2Q6QHC5 323 aa12.74□□□□□ -0.37
SPTLC2-201ENST00000216484 MRPL24Q96A35 216 aaKnown RBP12.74□□□□□ -0.37
SPTLC2-201ENST00000216484 GRIFINA4D1Z8 144 aa12.74□□□□□ -0.37
SPTLC2-201ENST00000216484 CEACAM4O75871 244 aa12.74□□□□□ -0.37
SPTLC2-201ENST00000216484 CLDN14O95500 239 aa12.74□□□□□ -0.37
SPTLC2-201ENST00000216484 C16orf47Q6ZP98 133 aaPredicted RBP12.74□□□□□ -0.37
SPTLC2-201ENST00000216484 WNT10AQ9GZT5 417 aa12.74□□□□□ -0.37
SPTLC2-201ENST00000216484 CLDN16Q9Y5I7 305 aa12.74□□□□□ -0.37
SPTLC2-201ENST00000216484 THY1P04216 161 aa12.73□□□□□ -0.37
SPTLC2-201ENST00000216484 KLK2P20151 261 aa12.73□□□□□ -0.37
SPTLC2-201ENST00000216484 NKX2-8O15522 239 aa12.73□□□□□ -0.37
SPTLC2-201ENST00000216484 GHRHP01286 108 aa12.73□□□□□ -0.37
SPTLC2-201ENST00000216484 SHISA4Q96DD7 197 aa12.73□□□□□ -0.37
SPTLC2-201ENST00000216484 C12orf73Q69YU5 71 aa12.73□□□□□ -0.37
SPTLC2-201ENST00000216484 SFTA2Q6UW10 78 aa12.73□□□□□ -0.37
SPTLC2-201ENST00000216484 ASCL4Q6XD76 172 aa12.73□□□□□ -0.37
SPTLC2-201ENST00000216484 NRIP2Q9BQI9 281 aa12.73□□□□□ -0.37
SPTLC2-201ENST00000216484 XIRP1Q702N8 1843 aaKnown RBP12.73□□□□□ -0.37
SPTLC2-201ENST00000216484 TMEM45BQ96B21 275 aa12.73□□□□□ -0.37
SPTLC2-201ENST00000216484 IGHV3-72A0A0B4J1Y9 119 aa12.73□□□□□ -0.37
SPTLC2-201ENST00000216484 CD1AP06126 327 aa12.73□□□□□ -0.37
SPTLC2-201ENST00000216484 CTSSP25774 331 aa12.73□□□□□ -0.37
SPTLC2-201ENST00000216484 EFNB2P52799 333 aa12.73□□□□□ -0.37
SPTLC2-201ENST00000216484 SERF2P84101 59 aa12.73□□□□□ -0.37
SPTLC2-201ENST00000216484 HIKESHIQ53FT3 197 aa12.73□□□□□ -0.37
SPTLC2-201ENST00000216484 OR5AC2Q9NZP5 309 aa12.73□□□□□ -0.37
SPTLC2-201ENST00000216484 DPRXA6NFQ7 191 aa12.73□□□□□ -0.37
SPTLC2-201ENST00000216484 LHX8Q68G74 356 aa12.73□□□□□ -0.37
SPTLC2-201ENST00000216484 C9orf62Q8N4C0 152 aa12.73□□□□□ -0.37
SPTLC2-201ENST00000216484 AGAP20933 346 aa12.72□□□□□ -0.37
SPTLC2-201ENST00000216484 CFAP161Q6P656 301 aa12.72□□□□□ -0.37
SPTLC2-201ENST00000216484 ZNF562Q6V9R5 426 aa12.72□□□□□ -0.37
SPTLC2-201ENST00000216484 TMEM171Q8WVE6 324 aa12.72□□□□□ -0.37
SPTLC2-201ENST00000216484 LIPFP07098 398 aa12.72□□□□□ -0.37
SPTLC2-201ENST00000216484 FGF5P12034 268 aa12.72□□□□□ -0.37
SPTLC2-201ENST00000216484 MC5RP33032 325 aa12.72□□□□□ -0.37
SPTLC2-201ENST00000216484 RIPPLY3P57055 190 aa12.72□□□□□ -0.37
SPTLC2-201ENST00000216484 DEFB124Q8NES8 71 aa12.72□□□□□ -0.37
SPTLC2-201ENST00000216484 KCNS1Q96KK3 526 aa12.72□□□□□ -0.37
SPTLC2-201ENST00000216484 SRD5A2P31213 254 aa12.72□□□□□ -0.37
SPTLC2-201ENST00000216484 TRPM7Q96QT4 1865 aa12.72□□□□□ -0.37
SPTLC2-201ENST00000216484 RGPD3A6NKT7 1758 aaPredicted RBP12.72□□□□□ -0.37
SPTLC2-201ENST00000216484 SMAD4Q13485 552 aaKnown RBP12.72□□□□□ -0.37
SPTLC2-201ENST00000216484 FCARP24071 287 aa12.72□□□□□ -0.37
SPTLC2-201ENST00000216484 CD300CQ08708 224 aa12.72□□□□□ -0.37
SPTLC2-201ENST00000216484 SURF2Q15527 256 aaPredicted RBP12.72□□□□□ -0.37
SPTLC2-201ENST00000216484 TCF23Q7RTU1 214 aa12.72□□□□□ -0.37
SPTLC2-201ENST00000216484 C10orf35Q96D05 121 aa12.72□□□□□ -0.37
SPTLC2-201ENST00000216484 TNFSF14O43557 240 aa12.72□□□□□ -0.37
SPTLC2-201ENST00000216484 SLC25A2Q9BXI2 301 aa12.72□□□□□ -0.37
SPTLC2-201ENST00000216484 SMDT1Q9H4I9 107 aa12.72□□□□□ -0.37
SPTLC2-201ENST00000216484 MEF2BQ02080 365 aaPredicted RBP12.71□□□□□ -0.37
SPTLC2-201ENST00000216484 ZFP64Q9NPA5 681 aa12.71□□□□□ -0.37
SPTLC2-201ENST00000216484 TMEM106BQ9NUM4 274 aa12.71□□□□□ -0.37
SPTLC2-201ENST00000216484 SIGLEC5O15389 551 aa12.71□□□□□ -0.37
SPTLC2-201ENST00000216484 DXOO77932 396 aaKnown RBP12.71□□□□□ -0.37
SPTLC2-201ENST00000216484 SIGLEC14Q08ET2 396 aa12.71□□□□□ -0.37
SPTLC2-201ENST00000216484 FAM106AQ4KMX7 169 aa12.71□□□□□ -0.37
SPTLC2-201ENST00000216484 ZBTB34Q8NCN2 500 aa12.71□□□□□ -0.37
SPTLC2-201ENST00000216484 C7orf66A4D0T2 115 aa12.71□□□□□ -0.37
SPTLC2-201ENST00000216484 LCN2P80188 198 aa12.71□□□□□ -0.37
SPTLC2-201ENST00000216484 C10orf111Q8N326 155 aa12.71□□□□□ -0.37
SPTLC2-201ENST00000216484 ZNF236Q9UL36 1845 aa12.71□□□□□ -0.37
SPTLC2-201ENST00000216484 CTDSPLO15194 276 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms