RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 KIR2DS1Q14954 304 aa11.73□□□□□ -0.53
UPK3A-201ENST00000216211 RNF152Q8N8N0 203 aa11.73□□□□□ -0.53
UPK3A-201ENST00000216211 DUSP18Q8NEJ0 188 aa11.73□□□□□ -0.53
UPK3A-201ENST00000216211 OR5M8Q8NGP6 311 aa11.73□□□□□ -0.53
UPK3A-201ENST00000216211 MRPL30Q8TCC3 161 aaKnown RBP11.73□□□□□ -0.53
UPK3A-201ENST00000216211 FCAMRQ8WWV6 532 aa11.73□□□□□ -0.53
UPK3A-201ENST00000216211 FAM46BQ96A09 425 aa11.73□□□□□ -0.53
UPK3A-201ENST00000216211 C7orf50Q9BRJ6 194 aaKnown RBP11.73□□□□□ -0.53
UPK3A-201ENST00000216211 KCNIP1Q9NZI2 227 aa11.73□□□□□ -0.53
UPK3A-201ENST00000216211 METTL21EPA6NDL7 271 aa11.72□□□□□ -0.53
UPK3A-201ENST00000216211 PDCD6O75340 191 aa11.72□□□□□ -0.53
UPK3A-201ENST00000216211 CA11O75493 328 aa11.72□□□□□ -0.53
UPK3A-201ENST00000216211 SCGNO76038 276 aa11.72□□□□□ -0.53
UPK3A-201ENST00000216211 IGHG4P01861 327 aa11.72□□□□□ -0.53
UPK3A-201ENST00000216211 GLAP06280 429 aa11.72□□□□□ -0.53
UPK3A-201ENST00000216211 CD3GP09693 182 aa11.72□□□□□ -0.53
UPK3A-201ENST00000216211 CNTFRP26992 372 aa11.72□□□□□ -0.53
UPK3A-201ENST00000216211 PPP1CCP36873 323 aaKnown RBP11.72□□□□□ -0.53
UPK3A-201ENST00000216211 UNC119Q13432 240 aa11.72□□□□□ -0.53
UPK3A-201ENST00000216211 DYRK1AQ13627 763 aa11.72□□□□□ -0.53
UPK3A-201ENST00000216211 MMDQ15546 238 aa11.72□□□□□ -0.53
UPK3A-201ENST00000216211 ODF3L1Q8IXM7 274 aa11.72□□□□□ -0.53
UPK3A-201ENST00000216211 OR52I2Q8NH67 350 aa11.72□□□□□ -0.53
UPK3A-201ENST00000216211 NEDD4LQ96PU5 975 aa11.72□□□□□ -0.53
UPK3A-201ENST00000216211 ABHD14AQ9BUJ0 271 aa11.72□□□□□ -0.53
UPK3A-201ENST00000216211 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.72□□□□□ -0.53
UPK3A-201ENST00000216211 MBNL3Q9NUK0 354 aaKnown RBP11.72□□□□□ -0.53
UPK3A-201ENST00000216211 ZMAT5Q9UDW3 170 aaKnown RBP11.72□□□□□ -0.53
UPK3A-201ENST00000216211 ZNF107Q9UII5 783 aaPredicted RBP11.72□□□□□ -0.53
UPK3A-201ENST00000216211 TRAV18A0A075B6X5 111 aa11.71□□□□□ -0.53
UPK3A-201ENST00000216211 SULT1C2O00338 296 aa11.71□□□□□ -0.53
UPK3A-201ENST00000216211 IGF1P05019 195 aa11.71□□□□□ -0.53
UPK3A-201ENST00000216211 PSMB8P28062 276 aa11.71□□□□□ -0.53
UPK3A-201ENST00000216211 KLF9Q13886 244 aaPredicted RBP11.71□□□□□ -0.53
UPK3A-201ENST00000216211 NKAPLQ5M9Q1 402 aa11.71□□□□□ -0.53
UPK3A-201ENST00000216211 C9orf66Q5T8R8 295 aa11.71□□□□□ -0.53
UPK3A-201ENST00000216211 OR10K2Q6IF99 312 aa11.71□□□□□ -0.53
UPK3A-201ENST00000216211 TOMM5Q8N4H5 51 aa11.71□□□□□ -0.53
UPK3A-201ENST00000216211 KCNG3Q8TAE7 436 aa11.71□□□□□ -0.53
UPK3A-201ENST00000216211 C4orf3Q8WVX3 66 aa11.71□□□□□ -0.53
UPK3A-201ENST00000216211 PPP1R14BQ96C90 147 aa11.71□□□□□ -0.53
UPK3A-201ENST00000216211 RITA1Q96K30 269 aa11.71□□□□□ -0.53
UPK3A-201ENST00000216211 PRR25Q96S07 402 aa11.71□□□□□ -0.53
UPK3A-201ENST00000216211 MRPL20Q9BYC9 149 aaKnown RBP11.71□□□□□ -0.53
UPK3A-201ENST00000216211 JPT1Q9UK76 154 aa11.71□□□□□ -0.53
UPK3A-201ENST00000216211 RAB27BO00194 218 aa11.7□□□□□ -0.54
UPK3A-201ENST00000216211 RAMP3O60896 148 aa11.7□□□□□ -0.54
UPK3A-201ENST00000216211 PFDN1O60925 122 aa11.7□□□□□ -0.54
UPK3A-201ENST00000216211 GSTT2BP0CG30 244 aa11.7□□□□□ -0.54
UPK3A-201ENST00000216211 ACTBP60709 375 aa11.7□□□□□ -0.54
UPK3A-201ENST00000216211 HTD2P86397 168 aa11.7□□□□□ -0.54
UPK3A-201ENST00000216211 SSBP1Q04837 148 aaKnown RBP11.7□□□□□ -0.54
UPK3A-201ENST00000216211 OR11H1Q8NG94 326 aa11.7□□□□□ -0.54
UPK3A-201ENST00000216211 ENKURQ8TC29 256 aa11.7□□□□□ -0.54
UPK3A-201ENST00000216211 DEDD2Q8WXF8 326 aa11.7□□□□□ -0.54
UPK3A-201ENST00000216211 NABP2Q9BQ15 211 aa11.7□□□□□ -0.54
UPK3A-201ENST00000216211 SULT4A1Q9BR01 284 aa11.7□□□□□ -0.54
UPK3A-201ENST00000216211 CST11Q9H112 138 aa11.7□□□□□ -0.54
UPK3A-201ENST00000216211 AUNIPQ9H7T9 357 aa11.7□□□□□ -0.54
UPK3A-201ENST00000216211 WSB1Q9Y6I7 421 aa11.7□□□□□ -0.54
UPK3A-201ENST00000216211 TENM3Q9P273 2699 aa11.7□□□□□ -0.54
UPK3A-201ENST00000216211 DNAH7Q8WXX0 4024 aa11.69□□□□□ -0.54
UPK3A-201ENST00000216211 FAM240BA0A1B0GVZ2 78 aa11.69□□□□□ -0.54
UPK3A-201ENST00000216211 ANKRD20A5PA0PJZ0 165 aa11.69□□□□□ -0.54
UPK3A-201ENST00000216211 CENPXA8MT69 81 aa11.69□□□□□ -0.54
UPK3A-201ENST00000216211 SEC14L6B5MCN3 397 aa11.69□□□□□ -0.54
UPK3A-201ENST00000216211 G3V318 75 aa11.69□□□□□ -0.54
UPK3A-201ENST00000216211 ATP6V0E1O15342 81 aa11.69□□□□□ -0.54
UPK3A-201ENST00000216211 YPEL1O60688 119 aa11.69□□□□□ -0.54
UPK3A-201ENST00000216211 OR5H8P0DN80 308 aa11.69□□□□□ -0.54
UPK3A-201ENST00000216211 PPIFP30405 207 aaKnown RBP11.69□□□□□ -0.54
UPK3A-201ENST00000216211 PRSS3P35030 304 aa11.69□□□□□ -0.54
UPK3A-201ENST00000216211 ECI1P42126 302 aa11.69□□□□□ -0.54
UPK3A-201ENST00000216211 OR3A3P47888 321 aa11.69□□□□□ -0.54
UPK3A-201ENST00000216211 AP3S2P59780 193 aa11.69□□□□□ -0.54
UPK3A-201ENST00000216211 FHL3Q13643 280 aa11.69□□□□□ -0.54
UPK3A-201ENST00000216211 RNASE12Q5GAN4 147 aaKnown RBP11.69□□□□□ -0.54
UPK3A-201ENST00000216211 ZNF554Q86TJ5 538 aa11.69□□□□□ -0.54
UPK3A-201ENST00000216211 CADM3Q8N126 398 aa11.69□□□□□ -0.54
UPK3A-201ENST00000216211 GPX8Q8TED1 209 aa11.69□□□□□ -0.54
UPK3A-201ENST00000216211 GALMQ96C23 342 aa11.69□□□□□ -0.54
UPK3A-201ENST00000216211 WWC2-AS2Q96NR7 200 aa11.69□□□□□ -0.54
UPK3A-201ENST00000216211 YPEL2Q96QA6 119 aa11.69□□□□□ -0.54
UPK3A-201ENST00000216211 ZNF251Q9BRH9 671 aa11.69□□□□□ -0.54
UPK3A-201ENST00000216211 FAAP24Q9BTP7 215 aa11.69□□□□□ -0.54
UPK3A-201ENST00000216211 LPAR5Q9H1C0 372 aa11.69□□□□□ -0.54
UPK3A-201ENST00000216211 KLK15Q9H2R5 256 aa11.69□□□□□ -0.54
UPK3A-201ENST00000216211 GNB4Q9HAV0 340 aa11.69□□□□□ -0.54
UPK3A-201ENST00000216211 SCPEP1Q9HB40 452 aa11.69□□□□□ -0.54
UPK3A-201ENST00000216211 PARP11Q9NR21 331 aa11.69□□□□□ -0.54
UPK3A-201ENST00000216211 MTFP1Q9UDX5 166 aa11.69□□□□□ -0.54
UPK3A-201ENST00000216211 ZNF580Q9UK33 172 aa11.69□□□□□ -0.54
UPK3A-201ENST00000216211 SAA2-SAA4A0A096LPE2 208 aa11.68□□□□□ -0.54
UPK3A-201ENST00000216211 IGHV7-81A0A0B4J1V7 117 aa11.68□□□□□ -0.54
UPK3A-201ENST00000216211 NAP1L6A6NFF2 107 aa11.68□□□□□ -0.54
UPK3A-201ENST00000216211 NBR2O15453 112 aa11.68□□□□□ -0.54
UPK3A-201ENST00000216211 RBBP9O75884 186 aa11.68□□□□□ -0.54
UPK3A-201ENST00000216211 RGS11O94810 467 aa11.68□□□□□ -0.54
UPK3A-201ENST00000216211 SAA2P0DJI9 122 aaPredicted RBP11.68□□□□□ -0.54
UPK3A-201ENST00000216211 PTHLHP12272 177 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms